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PDB: 27 件

7Z13
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S. cerevisiae CMGE dimer nucleating origin DNA melting
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
著者Lewis, J.S, Sousa, J.S, Costa, A.
登録日2022-02-24
公開日2022-06-15
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Mechanism of replication origin melting nucleated by CMG helicase assembly.
Nature, 606, 2022
7QHS
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S. cerevisiae CMGE nucleating origin DNA melting
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ...
著者Lewis, J.S, Sousa, J.S, Costa, A.
登録日2021-12-14
公開日2022-06-15
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism of replication origin melting nucleated by CMG helicase assembly.
Nature, 606, 2022
8FEM
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Panicum vigratum Dihydroflavonol 4-reductase complexed with NADP
分子名称: Dihydroflavonol 4-Reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Lewis, J.A, Kang, C.
登録日2022-12-06
公開日2023-09-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural Similarities and Overlapping Activities among Dihydroflavonol 4-Reductase, Flavanone 4-Reductase, and Anthocyanidin Reductase Offer Metabolic Flexibility in the Flavonoid Pathway.
Int J Mol Sci, 24, 2023
8FEN
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Panicum vigratum Dihydroflavonol 4-reductase complexed with NADP and DHQ
分子名称: (2R,3R)-2-(3,4-DIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-2,3-DIHYDRO-4H-CHROMEN-4-ONE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Panicum virgatum Dihydroflavonol 4-Reductase
著者Lewis, J.A, Kang, C.
登録日2022-12-06
公開日2023-09-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Similarities and Overlapping Activities among Dihydroflavonol 4-Reductase, Flavanone 4-Reductase, and Anthocyanidin Reductase Offer Metabolic Flexibility in the Flavonoid Pathway.
Int J Mol Sci, 24, 2023
6NP6
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BU of 6np6 by Molmil
Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
分子名称: Crp/Fnr family transcriptional regulator, GLYCEROL
著者Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Scarsdale, J.N, Lewis, J.P.
登録日2019-01-17
公開日2019-06-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Nitrosative Stress Sensing in Porphyromonas gingivalis: Structure and Mechanisms of the Heme Binding Transcriptional Regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
3T22
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BU of 3t22 by Molmil
Crystal structure of OxyR mutant from Porphyromonas gingivalis
分子名称: Redox-sensitive transcriptional activator OxyR
著者Svintradze, D.V, Wright, H.T, Lewis, J.P.
登録日2011-07-22
公開日2013-04-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis.
Acta Crystallogr.,Sect.D, 69, 2013
5T88
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BU of 5t88 by Molmil
Prolyl oligopeptidase from Pyrococcus furiosus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, PROLINE, ...
著者Ellis-Guardiola, K, Lewis, J, Sukumar, N.
登録日2016-09-06
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase.
Biochemistry, 58, 2019
5V30
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Crystal structure of the sensor domain of the transcriptional regulator HcpR from Porphyromonas Gingivalis
分子名称: GLYCEROL, SULFATE ION, Transcriptional regulator
著者Musayev, F.N, Belvin, B.R, Escalante, C.R, Turner, J, Lewis, J.P.
登録日2017-03-06
公開日2018-06-13
最終更新日2022-03-23
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Nitrosative stress sensing in Porphyromonas gingivalis: structure of and heme binding by the transcriptional regulator HcpR.
Acta Crystallogr D Struct Biol, 75, 2019
1BE9
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95 IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM CRIPT.
分子名称: CRIPT, PSD-95
著者Doyle, D.A, Lee, A, Lewis, J, Kim, E, Sheng, M, Mackinnon, R.
登録日1998-05-20
公開日1998-10-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ.
Cell(Cambridge,Mass.), 85, 1996
1BFE
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THE THIRD PDZ DOMAIN FROM THE SYNAPTIC PROTEIN PSD-95
分子名称: PSD-95
著者Doyle, D.A, Lee, A, Lewis, J, Kim, E, Sheng, M, Mackinnon, R.
登録日1998-05-20
公開日1998-10-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of a complexed and peptide-free membrane protein-binding domain: molecular basis of peptide recognition by PDZ.
Cell(Cambridge,Mass.), 85, 1996
6CAN
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BU of 6can by Molmil
Prolyl oligopeptidase mutant S477C from Pyrococcus furiosus
分子名称: CHLORIDE ION, Prolyl endopeptidase
著者Ellis-Guardiola, K, Lewis, J.C, Sukumar, N.
登録日2018-01-31
公開日2019-02-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure and Conformational Dynamics of Pyrococcus furiosus Prolyl Oligopeptidase.
Biochemistry, 58, 2019
7JLY
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BU of 7jly by Molmil
Crystal Structure of RNA Binding Protein PG1
分子名称: ACETATE ION, CALCIUM ION, RNA-binding protein
著者Musayev, F.N, Scarsdale, J.N, Belvin, B.R, Lewis, J.P.
登録日2020-07-30
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献High Resolution Structure of RNA Binding Protein PG1
To be published
6P2V
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BU of 6p2v by Molmil
RebH Variant 10S, Tryptamine 5-halogenase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH
著者Andorfer, M.C, Sukumar, N, Lewis, J.C.
登録日2019-05-22
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.553 Å)
主引用文献Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity
To Be Published
6P00
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BU of 6p00 by Molmil
RebH Variant 8F, Tryptamine 6-halogenase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH
著者Andorfer, M.C, Sukumar, N, Lewis, J.C.
登録日2019-05-16
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity
To Be Published
3HO7
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BU of 3ho7 by Molmil
Crystal structure of OxyR from Porphyromonas gingivalis
分子名称: OxyR
著者Svintradze, D.V, Wright, H.T, Lewis, J.P.
登録日2009-06-01
公開日2010-06-09
最終更新日2014-01-08
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis.
Acta Crystallogr.,Sect.D, 69, 2013
7JU0
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BU of 7ju0 by Molmil
RebH Variant 0S, Tryptamine 7-halogenase with bound tryptamine
分子名称: 2-(1H-INDOL-3-YL)ETHANAMINE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH
著者Andorfer, M.C, Sukumar, N, Lewis, J.C.
登録日2020-08-18
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.602 Å)
主引用文献Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity
To Be Published
2LZG
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BU of 2lzg by Molmil
NMR Structure of Mdm2 (6-125) with Pip-1
分子名称: E3 ubiquitin-protein ligase Mdm2, [(3R,5R,6S)-5-(3-chlorophenyl)-6-(4-chlorophenyl)-1-(cyclopropylmethyl)-2-oxopiperidin-3-yl]acetic acid
著者Michelsen, K.B, Jordan, J.B, Lewis, J, Long, A.M, Yang, E, Rew, Y, Zhou, J, Yakowec, P, Schnier, P.D, Huang, X, Poppe, L.
登録日2012-10-02
公開日2012-11-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Ordering of the N-Terminus of Human MDM2 by Small Molecule Inhibitors.
J.Am.Chem.Soc., 134, 2012
4LU6
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BU of 4lu6 by Molmil
Thermostabilized RebH
分子名称: Flavin-dependent tryptophan halogenase RebH, PHOSPHATE ION
著者Poor, C.B, Lewis, J.C.
登録日2013-07-24
公開日2014-06-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Improving the Stability and Catalyst Lifetime of the Halogenase RebH By Directed Evolution.
Chembiochem, 15, 2014
2AGN
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BU of 2agn by Molmil
Fitting of hepatitis C virus internal ribosome entry site domains into the 15 A Cryo-EM map of a HCV IRES-80S ribosome (H. sapiens) complex
分子名称: 6 nt A-RNA helix, HCV IRES DOMAIN II, HCV IRES IIIABC, ...
著者Boehringer, D, Thermann, R, Ostareck-Lederer, A, Lewis, J.D, Stark, H.
登録日2005-07-27
公開日2006-07-25
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (15 Å)
主引用文献Structure of the hepatitis C Virus IRES bound to the human 80S ribosome: remodeling of the HCV IRES
Structure, 13, 2005
4CB7
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BU of 4cb7 by Molmil
Structure of Influenza A H5N1 PB2 cap-binding domain with bound cap analogue (compound 8e)
分子名称: 5-[2-(2-azanyl-7-methyl-6-oxidanylidene-1H-purin-9-ium-9-yl)ethanoyl]-2-oxidanyl-benzoic acid, GLYCEROL, POLYMERASE BASIC SUBUNIT 2
著者Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
登録日2013-10-10
公開日2013-10-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
4CB5
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Structure of Influenza A H5N1 PB2 cap-binding domain with bound cap analogue (compound 8f)
分子名称: 9-N-(3-CARBOXY-4-HYDROXYPHENYL)KETOMETHYL-7-N-METHYLGUANINE, CHLORIDE ION, POLYMERASE BASIC SUBUNIT 2
著者Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
登録日2013-10-10
公開日2013-10-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
4CB6
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Structure of Influenza A H5N1 PB2 cap-binding domain with bound cap analogue (compound 11)
分子名称: 2,9-N,N-DI(4-CARBOXYBUTYL)-7-N-METHYLGUANINE, IODIDE ION, POLYMERASE BASIC SUBUNIT 2
著者Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
登録日2013-10-10
公開日2013-10-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
4CB4
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Structure of Influenza A H5N1 PB2 cap-binding domain with bound m7GTP
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, POLYMERASE BASIC SUBUNIT 2
著者Pautus, S, Sehr, P, Lewis, J, Fortune, A, Wolkerstorfer, A, Szolar, O, Gulligay, D, Lunardi, T, Decout, J.L, Cusack, S.
登録日2013-10-10
公開日2013-10-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New 7-Methyl-Guanosine Derivatives Targeting the Influenza Polymerase Pb2 CAP-Binding Domain
J.Med.Chem., 56, 2013
2VQZ
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Structure of the cap-binding domain of influenza virus polymerase subunit PB2 with bound m7GTP
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, POLYMERASE BASIC PROTEIN 2
著者Guilligay, D, Tarendeau, F, Resa-Infante, P, Coloma, R, Crepin, T, Sehr, P, Lewis, J, Ruigrok, R.W.H, Ortin, J, Hart, D.J, Cusack, S.
登録日2008-03-21
公開日2008-05-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structural Basis for CAP Binding by Influenza Virus Polymerase Subunit Pb2.
Nat.Struct.Mol.Biol., 15, 2008
2MHS
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BU of 2mhs by Molmil
NMR Structure of human Mcl-1
分子名称: Induced myeloid leukemia cell differentiation protein Mcl-1
著者Liu, G, Poppe, L, Aoki, K, Yamane, H, Lewis, J, Szyperski, T.
登録日2013-12-04
公開日2014-05-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献High-Quality NMR Structure of Human Anti-Apoptotic Protein Domain Mcl-1(171-327) for Cancer Drug Design.
Plos One, 9, 2014

 

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