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PDB: 1223 results

4YMN
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BU of 4ymn by Molmil
Structure of human DNA polymerase beta complexed with N7BG in the template base paired with incoming non-hydrolyzable CTP
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA 10-mer (up-primer), DNA 16-mer (template), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-06
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication.
Biochemistry, 2018
4YMO
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BU of 4ymo by Molmil
Structure of human DNA polymerase beta complexed with N7BG in the template opposite to incoming non-hydrolyzable CTP WITH MANGANESE IN THE ACTIVE SITE
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA 10-mer (up-primer), DNA 16-mer (template), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-07
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Structural and kinetic studies of the effect of guanine-N7 alkylation and metal cofactors on DNA replication.
Biochemistry, 2018
4YMM
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Structure of human DNA polymerase beta complexed with 7BG as the template base in a 1-nucleotide gapped DNA
Descriptor: DNA 10-mer (up-primer), DNA 16-mer (template), DNA 5-mer (dn-primer), ...
Authors:Lee, S, Koag, M.-C.
Deposit date:2015-03-06
Release date:2016-03-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Structure of human DNA polymerase beta complexed with 7BG as the template base in a 1-nucleotide gapped DNA
To Be Published
1UZP
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BU of 1uzp by Molmil
Integrin binding cbEGF22-TB4-cbEGF33 fragment of human fibrillin-1, Sm bound form cbEGF23 domain only.
Descriptor: FIBRILLIN-1, SAMARIUM (III) ION
Authors:Lee, S.S.J, Knott, V, Harlos, K, Handford, P.A, Stuart, D.I.
Deposit date:2004-03-15
Release date:2004-04-08
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure of the Integrin Binding Fragment from Fibrillin-1 Gives New Insights Into Microfibril Organization
Structure, 12, 2004
1UZJ
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BU of 1uzj by Molmil
Integrin binding cbEGF22-TB4-cbEGF33 fragment of human fibrillin-1, holo form.
Descriptor: CALCIUM ION, FIBRILLIN-1
Authors:Lee, S.S.J, Knott, V, Harlos, K, Handford, P.A, Stuart, D.I.
Deposit date:2004-03-12
Release date:2004-04-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of the Integrin Binding Fragment from Fibrillin-1 Gives New Insights Into Microfibril Organization
Structure, 12, 2004
1UZQ
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BU of 1uzq by Molmil
Integrin binding cbEGF22-TB4-cbEGF33 fragment of human fibrillin-1, apo form cbEGF23 domain only.
Descriptor: FIBRILLIN-1
Authors:Lee, S.S.J, Knott, V, Harlos, K, Handford, P.A, Stuart, D.I.
Deposit date:2004-03-15
Release date:2004-04-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Integrin Binding Fragment from Fibrillin-1 Gives New Insights Into Microfibril Organization
Structure, 12, 2004
6AX3
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BU of 6ax3 by Molmil
Complex structure of JMJD5 and Symmetric Dimethyl-Arginine (SDMA)
Descriptor: 2-OXOGLUTARIC ACID, Lysine-specific demethylase 8, N3, ...
Authors:Lee, S, Liu, H, Wang, Y, Dai, S, Zhang, G.
Deposit date:2017-09-06
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Specific Recognition of Arginine Methylated Histone Tails by JMJD5 and JMJD7.
Sci Rep, 8, 2018
1C98
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BU of 1c98 by Molmil
SOLUTION STRUCTURE OF NEUROMEDIN B
Descriptor: NEUROMEDIN B
Authors:Lee, S, Kim, Y.
Deposit date:1999-08-01
Release date:1999-08-11
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of neuromedin B by (1)H nuclear magnetic resonance spectroscopy.
FEBS Lett., 460, 1999
1C9A
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BU of 1c9a by Molmil
SOLUTION STRUCTURE OF NEUROMEDIN B
Descriptor: NEUROMEDIN B
Authors:Lee, S, Kim, Y.
Deposit date:1999-08-01
Release date:1999-11-11
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of neuromedin B by (1)H nuclear magnetic resonance spectroscopy.
FEBS Lett., 460, 1999
4YJ6
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BU of 4yj6 by Molmil
The Crystal Structure of a Bacterial Aryl Acylamidase Belonging to the Amidase signature (AS) enzymes family
Descriptor: Aryl acylamidase, PHOSPHATE ION
Authors:Lee, S, Park, E.-H, Ko, H.-J, Bang, W.-G, Choi, I.-G.
Deposit date:2015-03-03
Release date:2015-11-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure analysis of a bacterial aryl acylamidase belonging to the amidase signature enzyme family
Biochem.Biophys.Res.Commun., 467, 2015
4HYX
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BU of 4hyx by Molmil
Crystal Structure Analysis of the Bacteriorhodopsin in Facial Amphiphile-4 DMPC Bicelle
Descriptor: Bacteriorhodopsin, DECANE, GLYCEROL, ...
Authors:Lee, S, Stout, C.D, Zhang, Q.
Deposit date:2012-11-14
Release date:2013-03-20
Last modified:2013-05-22
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Steroid-based facial amphiphiles for stabilization and crystallization of membrane proteins.
Proc.Natl.Acad.Sci.USA, 110, 2013
6AVS
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BU of 6avs by Molmil
Complex structure of JMJD5 and Symmetric Monomethyl-Arginine (MMA)
Descriptor: (2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid, Lysine-specific demethylase 8, ZINC ION
Authors:Lee, S, Liu, H, Wang, Y, Dai, S, Zhang, G.
Deposit date:2017-09-04
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Specific Recognition of Arginine Methylated Histone Tails by JMJD5 and JMJD7.
Sci Rep, 8, 2018
7CTC
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BU of 7ctc by Molmil
FECH - inhibitor complex 1
Descriptor: 2-(4-tert-butylphenyl)-5-[(quinolin-2-ylamino)methyl]-6H-[1,2,4]triazolo[1,5-a]pyrimidin-7-one, FE2/S2 (INORGANIC) CLUSTER, Ferrochelatase, ...
Authors:Lee, S.J, Park, J.
Deposit date:2020-08-18
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:FECH - inhibitor complex 1
to be published
7CT7
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BU of 7ct7 by Molmil
FECH - inhibitor complex 2
Descriptor: 2-[[(4-chlorophenyl)amino]methyl]-5-propyl-6H-[1,2,4]triazolo[1,5-a]pyrimidin-7-one, FE2/S2 (INORGANIC) CLUSTER, Ferrochelatase, ...
Authors:Lee, S.J, Park, J.
Deposit date:2020-08-18
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:FECH - inhibitor complex 1
to be published
3DAK
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BU of 3dak by Molmil
Crystal Structure of Domain-Swapped OSR1 kinase domain
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase OSR1
Authors:Lee, S, Cobb, M.H, Goldsmith, E.J.
Deposit date:2008-05-29
Release date:2009-02-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of domain-swapped STE20 OSR1 kinase domain.
Protein Sci., 18, 2008
5CKR
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BU of 5ckr by Molmil
Crystal Structure of MraY in complex with Muraymycin D2
Descriptor: Muraymycin D2, Phospho-N-acetylmuramoyl-pentapeptide-transferase
Authors:Lee, S.Y, Chung, B.C, Mashalidis, E.H, Tanino, T, Kim, M, Hong, J, Ichikawa, S.
Deposit date:2015-07-15
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural insights into inhibition of lipid I production in bacterial cell wall synthesis.
Nature, 533, 2016
5WPL
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BU of 5wpl by Molmil
KRas G12V, bound to GppNHp and miniprotein 225-11
Descriptor: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ...
Authors:Lee, S.-J, Shim, S.Y, McGee, J.H, Verdine, G.L.
Deposit date:2017-08-05
Release date:2018-01-03
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Exceptionally high-affinity Ras binders that remodel its effector domain.
J. Biol. Chem., 293, 2018
5CUS
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BU of 5cus by Molmil
Crystal Structure of sErbB3-Fab3379 Complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab LC region of KTN3379, IgG H chain, ...
Authors:Lee, S, Schlessinger, J.
Deposit date:2015-07-25
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Inhibition of ErbB3 by a monoclonal antibody that locks the extracellular domain in an inactive configuration.
Proc.Natl.Acad.Sci.USA, 112, 2015
5WPM
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BU of 5wpm by Molmil
KRas G12V, bound to GppNHp and miniprotein 225-11(A30R)
Descriptor: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Lee, S.-J, Shim, S.Y, McGee, J.H, Verdine, G.L.
Deposit date:2017-08-05
Release date:2018-01-03
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Exceptionally high-affinity Ras binders that remodel its effector domain.
J. Biol. Chem., 293, 2018
7CHQ
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BU of 7chq by Molmil
AcrIE2
Descriptor: anti-CRISPR AcrIE2
Authors:Lee, S.Y, Park, H.H.
Deposit date:2020-07-06
Release date:2021-05-19
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:A 1.3 angstrom high-resolution crystal structure of an anti-CRISPR protein, AcrI E2.
Biochem.Biophys.Res.Commun., 533, 2020
4FGZ
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BU of 4fgz by Molmil
Crystal Structure of Phosphoethanolamine Methyltransferase from Plasmodium falciparum in Complex with Amodiaquine
Descriptor: 4-[(7-CHLOROQUINOLIN-4-YL)AMINO]-2-[(DIETHYLAMINO)METHYL]PHENOL, PHOSPHATE ION, Phosphoethanolamine N-methyltransferase, ...
Authors:Lee, S.G, Alpert, T.D, Jez, J.M.
Deposit date:2012-06-05
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Crystal structure of phosphoethanolamine methyltransferase from Plasmodium falciparum in complex with amodiaquine.
Bioorg.Med.Chem.Lett., 22, 2012
7YMO
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BU of 7ymo by Molmil
Crystal structure of the recombination mediator protein RecO from Campylobacter jejuni
Descriptor: Recombination protein RecO, ZINC ION
Authors:Lee, S, Oh, H.B, Yoon, S.I.
Deposit date:2022-07-29
Release date:2022-08-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Recombination Mediator Protein RecO from Campylobacter jejuni and Its Interaction with DNA and a Zinc Ion.
Int J Mol Sci, 23, 2022
3CRC
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BU of 3crc by Molmil
Crystal Structure of Escherichia coli MazG, the Regulator of Nutritional Stress Response
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein mazG
Authors:Lee, S, Kim, M.H, Kang, B.S, Kim, J.S, Kim, Y.G, Kim, K.J.
Deposit date:2008-04-05
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.
J.Biol.Chem., 283, 2008
4ICS
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BU of 4ics by Molmil
Crystal structure of PepS from Streptococcus pneumoniae in complex with a substrate
Descriptor: Aminopeptidase PepS, GLYCINE, TRYPTOPHAN, ...
Authors:Lee, S, Kim, K.K, Ta, M.H.
Deposit date:2012-12-11
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure-based elucidation of the regulatory mechanism for aminopeptidase activity.
Acta Crystallogr.,Sect.D, 69, 2013
4ICR
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BU of 4icr by Molmil
Structural basis for substrate recognition and reaction mechanism of bacterial aminopeptidase peps
Descriptor: Aminopeptidase PepS, CACODYLATE ION, ZINC ION
Authors:Lee, S, Kim, K.K, Ta, M.H.
Deposit date:2012-12-11
Release date:2013-10-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure-based elucidation of the regulatory mechanism for aminopeptidase activity.
Acta Crystallogr.,Sect.D, 69, 2013

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