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PDB: 93 results

9G8B
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BU of 9g8b by Molmil
CryoEM structure of the fragment-2 (2892-3236) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Descriptor: The grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Authors:Lien, Y.-W, Amendola, D, Lee, K.S, Bartlau, N, Xu, J, Furusawa, G, Polz, M.F, Stocker, R, Weiss, G.L, Pilhofer, M.
Deposit date:2024-07-23
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanism of bacterial predation via ixotrophy.
Science, 386, 2024
9FLV
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BU of 9flv by Molmil
CryoEM structure of the fragment-5 (2393-2807) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Descriptor: The grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Authors:Lien, Y.-W, Amendola, D, Lee, K.S, Bartlau, N, Xu, J, Furusawa, G, Polz, M.F, Stocker, R, Weiss, G.L, Pilhofer, M.
Deposit date:2024-06-05
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mechanism of bacterial predation via ixotrophy.
Science, 386, 2024
9FLS
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BU of 9fls by Molmil
CryoEM structure of the fragment-3 (2061-2397) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Descriptor: The grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Authors:Lien, Y.-W, Amendola, D, Lee, K.S, Bartlau, N, Xu, J, Furusawa, G, Polz, M.F, Stocker, R, Weiss, G.L, Pilhofer, M.
Deposit date:2024-06-05
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanism of bacterial predation via ixotrophy.
Science, 386, 2024
9FLW
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BU of 9flw by Molmil
CryoEM structure of the fragment-6 (3571-4078) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Descriptor: The grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Authors:Lien, Y.-W, Amendola, D, Lee, K.S, Bartlau, N, Xu, J, Furusawa, G, Polz, M.F, Stocker, R, Weiss, G.L, Pilhofer, M.
Deposit date:2024-06-05
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mechanism of bacterial predation via ixotrophy.
Science, 386, 2024
9FLP
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BU of 9flp by Molmil
CryoEM structure of the neck (1403-2314) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Descriptor: The grappling hook protein A in the bacterium Aureispira sp. CCB-QB1
Authors:Lien, Y.-W, Amendola, D, Lee, K.S, Bartlau, N, Xu, J, Furusawa, G, Polz, M.F, Stocker, R, Weiss, G.L, Pilhofer, M.
Deposit date:2024-06-05
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Mechanism of bacterial predation via ixotrophy.
Science, 386, 2024
9FLY
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BU of 9fly by Molmil
CryoEM structure of the base (4151-5009) in the grappling hook protein A (GhpA) in the bacterium Aureispira sp. CCB-QB1
Descriptor: The grappling hook protein A in the bacterium Aureispira sp. CCB-QB1
Authors:Lien, Y.-W, Amendola, D, Lee, K.S, Bartlau, N, Xu, J, Furusawa, G, Polz, M.F, Stocker, R, Weiss, G.L, Pilhofer, M.
Deposit date:2024-06-05
Release date:2024-10-16
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mechanism of bacterial predation via ixotrophy.
Science, 386, 2024
4O6W
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BU of 4o6w by Molmil
Peptide-Based Inhibitors of Plk1 Polo-box Domain
Descriptor: Peptide-Based inhibitor, Serine/threonine-protein kinase PLK1
Authors:Qian, W.-J, Park, J.-E, Lim, D.C, Park, S.-Y, Lee, K.-W, Yaffe, M.B, Lee, K.S, Burke, T.R.
Deposit date:2013-12-23
Release date:2014-12-03
Method:X-RAY DIFFRACTION (1.448 Å)
Cite:Mono-anionic phosphopeptides produced by unexpected histidine alkylation exhibit high plk1 polo-box domain-binding affinities and enhanced antiproliferative effects in hela cells.
Biopolymers, 102, 2014
3EF6
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BU of 3ef6 by Molmil
Crystal structure of Toluene 2,3-Dioxygenase Reductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, SULFATE ION, ...
Authors:Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
Deposit date:2008-09-08
Release date:2009-03-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
4N7V
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BU of 4n7v by Molmil
Crystal structure of human Plk4 cryptic polo box (CPB) in complex with a Cep152 N-terminal fragment
Descriptor: Centrosomal protein of 152 kDa, Serine/threonine-protein kinase PLK4
Authors:Park, S.-Y, Park, J.-E, Tian, L, Kim, T.-S, Yang, W, Lee, K.S.
Deposit date:2013-10-16
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.758 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
4N9J
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BU of 4n9j by Molmil
Crystal structure of the cryptic polo box domain of human Plk4
Descriptor: CHLORIDE ION, SULFATE ION, Serine/threonine-protein kinase PLK4
Authors:Ku, B, Kim, J.H, Lee, K.S, Kim, S.J.
Deposit date:2013-10-21
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular basis for unidirectional scaffold switching of human Plk4 in centriole biogenesis.
Nat.Struct.Mol.Biol., 21, 2014
3EQQ
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BU of 3eqq by Molmil
Apo Toluene 2,3-Dioxygenase
Descriptor: Benzene 1,2-dioxygenase subunit alpha, Benzene 1,2-dioxygenase subunit beta, FE (II) ION, ...
Authors:Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
Deposit date:2008-10-01
Release date:2009-03-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
3EN1
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BU of 3en1 by Molmil
Crystal structure of Toluene 2,3-Dioxygenase
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Benzene 1,2-dioxygenase subunit alpha, Benzene 1,2-dioxygenase subunit beta, ...
Authors:Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
Deposit date:2008-09-25
Release date:2009-03-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
5J8H
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BU of 5j8h by Molmil
Structure of calmodulin in a complex with a peptide derived from a calmodulin-dependent kinase
Descriptor: CALCIUM ION, Calmodulin, Eukaryotic elongation factor 2 kinase
Authors:Alphonse, S, Lee, K, Piserchio, A, Tavares, C.D.J, Giles, D.H, Wellmann, R.M, Dalby, K.N, Ghose, R.
Deposit date:2016-04-07
Release date:2016-09-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis for the Recognition of Eukaryotic Elongation Factor 2 Kinase by Calmodulin.
Structure, 24, 2016
6PTS
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BU of 6pts by Molmil
NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state A)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
Authors:Fang, Z, Lee, K, Gasmi-Seabrook, G, Ikura, M, Marshall, C.B.
Deposit date:2019-07-16
Release date:2020-05-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane.
Proc.Natl.Acad.Sci.USA, 117, 2020
6N45
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BU of 6n45 by Molmil
Crystal structure of the cryptic polo box domain of human activated Plk4 variant 1
Descriptor: Chimera protein of Serine/threonine-protein kinase PLK4 and DDB1- and CUL4-associated factor 1
Authors:Zhang, L, Park, J.-E, Meng, L, Lee, K.S.
Deposit date:2018-11-17
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Phase separation of Polo-like kinase 4 by autoactivation and clustering drives centriole biogenesis.
Nat Commun, 10, 2019
6N46
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BU of 6n46 by Molmil
Crystal structure of the cryptic polo box domain of a human activated Plk4
Descriptor: Serine/threonine-protein kinase PLK4
Authors:Park, J.-E, DiMaio, F, Zhang, L, Lee, K.S.
Deposit date:2018-11-17
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.708 Å)
Cite:Phase separation of Polo-like kinase 4 by autoactivation and clustering drives centriole biogenesis.
Nat Commun, 10, 2019
6PTW
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BU of 6ptw by Molmil
NMR data-driven model of KRas-GMPPNP:RBD-CRD complex tethered to a nanodisc (state B)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
Authors:Fang, Z, Lee, K, Gasmi-Seabrook, G, Ikura, M, Marshall, C.B.
Deposit date:2019-07-16
Release date:2020-05-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Multivalent assembly of KRAS with the RAS-binding and cysteine-rich domains of CRAF on the membrane.
Proc.Natl.Acad.Sci.USA, 117, 2020
6NDL
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BU of 6ndl by Molmil
Crystal structure of Staphylococcus aureus biotin protein ligase in complex with a sulfonamide inhibitor
Descriptor: 1-[4-(6-aminopurin-9-yl)butylsulfamoyl]-3-[4-[(4~{S})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]butyl]urea, Biotin Protein Ligase, GLYCEROL
Authors:Marshall, A.C, Polyak, S.W, Bruning, J.B, Lee, K.
Deposit date:2018-12-13
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sulfonamide-Based Inhibitors of Biotin Protein Ligase as New Antibiotic Leads.
Acs Chem.Biol., 14, 2019
2K6P
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BU of 2k6p by Molmil
Solution Structure of hypothetical protein, HP1423
Descriptor: Uncharacterized protein HP_1423
Authors:Kim, J, Park, S, Lee, K, Son, W, Sohn, N, Lee, B.
Deposit date:2008-07-15
Release date:2009-06-16
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of hypothetical protein HP1423 (Y1423_HELPY) reveals the presence of alphaL motif related to RNA binding
Proteins, 75, 2009
2N8N
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BU of 2n8n by Molmil
Solution structure of translation initiation factor
Descriptor: Translation initiation factor IF-1
Authors:Kim, D, Lee, K, Lee, B.
Deposit date:2015-10-21
Release date:2016-10-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and dynamics study of translation initiation factor 1 from Staphylococcus aureus suggests its RNA binding mode
Biochim.Biophys.Acta, 1865, 2017
3M6C
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BU of 3m6c by Molmil
Crystal structure of Mycobacterium tuberculosis GroEL1 apical domain
Descriptor: 60 kDa chaperonin 1
Authors:Tsai, F.T.F, Sielaff, B, Lee, K.
Deposit date:2010-03-15
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional conservation of Mycobacterium tuberculosis GroEL paralogs suggests that GroEL1 Is a chaperonin.
J.Mol.Biol., 405, 2011
4YWV
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BU of 4ywv by Molmil
Structural insight into the substrate inhibition mechanism of NADP+-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes
Descriptor: 4-oxobutanoic acid, SULFATE ION, Succinic semialdehyde dehydrogenase
Authors:Park, S.A, Jang, E.H, Chi, Y.M, Lee, K.S.
Deposit date:2015-03-21
Release date:2015-05-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insight into the substrate inhibition mechanism of NADP(+)-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes.
Biochem.Biophys.Res.Commun., 461, 2015
4YWU
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BU of 4ywu by Molmil
Structural insight into the substrate inhibition mechanism of NADP+-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes
Descriptor: 4-oxobutanoic acid, SULFATE ION, Succinic semialdehyde dehydrogenase
Authors:Jang, E.H, Park, S.A, Chi, Y.M, Lee, K.S.
Deposit date:2015-03-21
Release date:2015-05-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insight into the substrate inhibition mechanism of NADP(+)-dependent succinic semialdehyde dehydrogenase from Streptococcus pyogenes.
Biochem.Biophys.Res.Commun., 461, 2015
3DQY
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BU of 3dqy by Molmil
Crystal structure of Toluene 2,3-Dioxygenase Ferredoxin
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Toluene 1,2-dioxygenase system ferredoxin subunit
Authors:Friemann, R, Lee, K, Brown, E.N, Gibson, D.T, Eklund, H, Ramaswamy, S.
Deposit date:2008-07-10
Release date:2009-03-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structures of the multicomponent Rieske non-heme iron toluene 2,3-dioxygenase enzyme system
Acta Crystallogr.,Sect.D, 65, 2009
4ILF
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BU of 4ilf by Molmil
Crystal structure of DsbC R125A from Salmonella enterica serovar Typhimurium
Descriptor: Thiol:disulfide interchange protein DsbC
Authors:Ha, N.C, Li, J, Kim, J.S, Yoon, B.Y, Yeom, J.H, Lee, K.
Deposit date:2012-12-31
Release date:2013-10-16
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal structure of the periplasmic disulfide-bond isomerase DsbC from Salmonella enterica serovar Typhimurium and the mechanistic implications.
J.Struct.Biol., 183, 2013

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