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PDB: 787 件

3QWZ
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Crystal structure of FAF1 UBX-p97N-domain complex
分子名称: FAS-associated factor 1, Transitional endoplasmic reticulum ATPase
著者Park, J.K, Jeon, H, Lee, J.J, Kim, K.H, Lee, K.J, Kim, E.E.
登録日2011-02-28
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dissection of the interaction between FAF1 UBX and p97
To be Published
1J9K
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BU of 1j9k by Molmil
CRYSTAL STRUCTURE OF SURE PROTEIN FROM T.MARITIMA IN COMPLEX WITH TUNGSTATE
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, STATIONARY PHASE SURVIVAL PROTEIN, ...
著者Suh, S.W, Lee, J.Y, Kwak, J.E, Moon, J.
登録日2001-05-27
公開日2001-09-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure and functional analysis of the SurE protein identify a novel phosphatase family.
Nat.Struct.Biol., 8, 2001
2KI2
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BU of 2ki2 by Molmil
Solution Structure of ss-DNA Binding Protein 12RNP2 Precursor, HP0827(O25501_HELPY) form Helicobacter pylori
分子名称: Ss-DNA binding protein 12RNP2
著者Ma, C, Lee, J, Kim, J, Park, S, Kwon, A, Lee, B.
登録日2009-04-20
公開日2009-10-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR solution structure of HP0827 (O25501_HELPY) from Helicobacter pylori: model of the possible RNA-binding site
J.Biochem., 146, 2009
5WLY
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BU of 5wly by Molmil
E. coli LpxH- 8 mutations
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FORMIC ACID, ...
著者Bohl, T.E, Aihara, H, Shi, K, Lee, J.K.
登録日2017-07-28
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The substrate-binding cap of the UDP-diacylglucosamine pyrophosphatase LpxH is highly flexible, enabling facile substrate binding and product release.
J. Biol. Chem., 293, 2018
7WV4
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ectoTLR3-poly(I:C) cluster
分子名称: RNA (80-MER), Toll-like receptor 3
著者Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
登録日2022-02-09
公開日2022-11-16
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVF
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ectoTLR3-mAb12-poly(I:C) complex
分子名称: RNA (46-MER), Toll-like receptor 3, mAb12
著者Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
登録日2022-02-10
公開日2022-11-16
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVJ
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NT-mut(K117D,K139D,K145D) TLR3 -poly I:C complex
分子名称: RNA (46-MER), Toll-like receptor 3
著者Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
登録日2022-02-10
公開日2022-11-16
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
7WVE
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CT-mut (D523K,D524K,E527K) TLR3-poly(I:C) complex
分子名称: RNA (46-MER), Toll-like receptor 3
著者Lim, C.S, Jang, Y.H, Lee, G.Y, Han, G.M, Lee, J.O.
登録日2022-02-10
公開日2022-11-16
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献TLR3 forms a highly organized cluster when bound to a poly(I:C) RNA ligand.
Nat Commun, 13, 2022
4ERZ
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BU of 4erz by Molmil
X-ray structure of WDR5-MLL4 Win motif peptide binary complex
分子名称: Histone-lysine N-methyltransferase MLL4, WD repeat-containing protein 5
著者Dharmarajan, V, Lee, J.-H, Patel, A, Skalnik, D.G, Cosgrove, M.S.
登録日2012-04-21
公開日2012-05-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases.
J.Biol.Chem., 287, 2012
5F3K
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X-Ray Crystallographic Structure of hTrap1 N-terminal Domain-apo
分子名称: Heat shock protein 75 kDa, mitochondrial
著者Sung, N, Lee, J, Kim, J, Chang, C, Joachimiak, A, Lee, S, Tsai, F.T.F.
登録日2015-12-02
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Mitochondrial Hsp90 is a ligand-activated molecular chaperone coupling ATP binding to dimer closure through a coiled-coil intermediate.
Proc.Natl.Acad.Sci.USA, 113, 2016
6V05
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BU of 6v05 by Molmil
Cryo-EM structure of a substrate-engaged Bam complex
分子名称: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Tomasek, D, Rawson, S, Lee, J, Wzorek, J.S, Harrison, S.C, Li, Z, Kahne, D.
登録日2019-11-18
公開日2020-06-10
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of a nascent membrane protein as it folds on the BAM complex.
Nature, 583, 2020
7DVN
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Crystal structure of a MarR family protein in complex with a lipid-like effector molecule from the psychrophilic bacterium Paenisporosarcina sp. TG-14
分子名称: MarR family transcriptional regulator, PALMITIC ACID
著者Lee, C.W, Hwang, J, Do, H, Lee, J.H.
登録日2021-01-14
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a MarR family protein from the psychrophilic bacterium Paenisporosarcina sp. TG-14 in complex with a lipid-like molecule.
Iucrj, 8, 2021
6D2L
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Crystal structure of human CARM1 with (S)-SKI-72
分子名称: (2S,5S)-2-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-5-[(benzylamino)methyl]-N-[2-(4-hydroxyphenyl)ethyl]hexanamide, GLYCEROL, Histone-arginine methyltransferase CARM1, ...
著者DONG, A, ZENG, H, WALKER, J.R, Hutchinson, A, Seitova, A, LUO, M, CAI, X.C, KE, W, WANG, J, SHI, C, ZHENG, W, LEE, J.P, IBANEZ, G, Bountra, C, Arrowsmith, C.H, Edwards, A.M, BROWN, P.J, WU, H, Structural Genomics Consortium (SGC)
登録日2018-04-13
公開日2018-05-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A chemical probe of CARM1 alters epigenetic plasticity against breast cancer cell invasion.
Elife, 8, 2019
2O4C
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BU of 2o4c by Molmil
Crystal Structure of D-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
分子名称: Erythronate-4-phosphate dehydrogenase, GLYCEROL, L(+)-TARTARIC ACID, ...
著者Ha, J.Y, Lee, J.H, Kim, K.H, Kim, D.J, Lee, H.H, Kim, H.K, Yoon, H.J, Suh, S.W.
登録日2006-12-04
公開日2007-02-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of d-Erythronate-4-phosphate Dehydrogenase Complexed with NAD
J.Mol.Biol., 366, 2007
6ILA
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BU of 6ila by Molmil
Two Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: Fructuronate-tagaturonate epimerase UxaE, GLYCEROL, PHOSPHATE ION, ...
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
6IL9
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One Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: Fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi in complex with 1 glycerol, GLYCEROL, ZINC ION
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.72005355 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To Be Published
8CZ4
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Crystal structure of SARS-CoV-2 Mpro with compound C3
分子名称: 3C-like proteinase, N-(4-tert-butylphenyl)-N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4-yl)acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8CYU
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BU of 8cyu by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound C5
分子名称: 3C-like proteinase, N-[(4-chlorothiophen-2-yl)methyl]-N-[4-(dimethylamino)phenyl]-2-(isoquinolin-4-yl)acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8CYZ
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Crystal structure of SARS-CoV-2 Mpro with compound C4
分子名称: 3C-like proteinase, N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4-yl)-N-[4-(methylsulfanyl)phenyl]acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
8CZ7
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BU of 8cz7 by Molmil
Crystal structure of SARS-CoV-2 Mpro with compound C2
分子名称: 3C-like proteinase, N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4-yl)-N-(4-methoxyphenyl)acetamide
著者Worrall, L.J, Lee, J, Strynadka, N.C.J.
登録日2022-05-24
公開日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel class of broad-spectrum active-site-directed 3C-like protease inhibitors with nanomolar antiviral activity against highly immune-evasive SARS-CoV-2 Omicron subvariants.
Emerg Microbes Infect, 12, 2023
2JEL
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BU of 2jel by Molmil
JEL42 FAB/HPR COMPLEX
分子名称: HISTIDINE-CONTAINING PROTEIN, JEL42 FAB FRAGMENT, SULFATE ION
著者Prasad, L, Waygood, E.B, Lee, J.S, Delbaere, L.T.J.
登録日1998-02-24
公開日1998-05-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The 2.5 A resolution structure of the jel42 Fab fragment/HPr complex
J.Mol.Biol., 280, 1998
6ILB
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BU of 6ilb by Molmil
Native crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: 1,2-ETHANEDIOL, Fructuronate-tagaturonate epimerase UxaE, MANGANESE (II) ION
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
3JTR
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BU of 3jtr by Molmil
Mutations in Cephalosporin Acylase Affecting Stability and Autoproteolysis
分子名称: GLYCEROL, Glutaryl 7-aminocephalosporanic acid acylase
著者Cho, K.J, Kim, J.K, Lee, J.H, Shin, H.J, Park, S.S, Kim, K.H.
登録日2009-09-14
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural features of cephalosporin acylase reveal the basis of autocatalytic activation.
Biochem.Biophys.Res.Commun., 390, 2009
3JTQ
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Mutations in Cephalosporin Acylase Affecting Stability and Autoproteolysis
分子名称: GLYCEROL, Glutaryl 7-aminocephalosporanic acid acylase
著者Cho, K.J, Kim, J.K, Lee, J.H, Shin, H.J, Park, S.S, Kim, K.H.
登録日2009-09-14
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural features of cephalosporin acylase reveal the basis of autocatalytic activation.
Biochem.Biophys.Res.Commun., 390, 2009
7WI1
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The mutant variant of PNGM-1, H93 was substituuted for alanine to study metal coordination
分子名称: Metallo-beta-lactamase PNGM-1, ZINC ION
著者Park, Y.S, Kang, L.W, Lee, J.H.
登録日2022-01-01
公開日2023-01-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020

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件を2024-06-12に公開中

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