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PDB: 750 results

4JCA
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Crystal Structure of the apo form of the evolved variant of the computationally designed serine hydrolase, OSH55.4_H1. Northeast Structural Genomics Consortium (NESG) Target OR273
Descriptor: CITRIC ACID, RUBIDIUM ION, serine hydrolase
Authors:Kuzin, A.P, Lew, S, Rajagopalan, S, Seetharaman, J, Tong, S, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-02-21
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.411 Å)
Cite:Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
3N76
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BU of 3n76 by Molmil
Crystal structure of 3-dehydroquinate dehydratase from Mycobacterium tuberculosis in complex with compound 5
Descriptor: (1S,3R,4R,5S)-1,3,4-TRIHYDROXY-5-(3-PHENOXYPROPYL)CYCLOHEXANECARBOXYLIC ACID, 3-dehydroquinate dehydratase
Authors:Dias, M.V.B, Snee, W.C, Bromfield, K.M, Payne, R, Palaninathan, S.K, Ciulli, A, Howard, N.I, Abell, C, Sacchettini, J.C, Blundell, T.L.
Deposit date:2010-05-26
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural investigation of inhibitor designs targeting 3-dehydroquinate dehydratase from the shikimate pathway of Mycobacterium tuberculosis.
Biochem.J., 436, 2011
5U0S
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BU of 5u0s by Molmil
Cryo-EM structure of the Mediator-RNAPII complex
Descriptor: Mediator complex subunit 10, Mediator complex subunit 11, Mediator complex subunit 14, ...
Authors:Tsai, K.-L, Yu, X, Gopalan, S, Chao, T.-C, Zhang, Y, Florens, L, Washburn, M.P, Murakami, K, Conaway, R.C, Conaway, J.W, Asturias, F.
Deposit date:2016-11-26
Release date:2017-03-08
Last modified:2020-01-01
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Mediator structure and rearrangements required for holoenzyme formation.
Nature, 544, 2017
2GNP
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BU of 2gnp by Molmil
Structural Genomics, the crystal structure of a transcriptional regulator from Streptococcus pneumoniae TIGR4
Descriptor: DI(HYDROXYETHYL)ETHER, transcriptional regulator
Authors:Tan, K, Duggan, E, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-04-10
Release date:2006-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of a transcriptional regulator from Streptococcus pneumoniae TIGR4
To be Published
3NBM
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BU of 3nbm by Molmil
The lactose-specific IIB component domain structure of the phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) from Streptococcus pneumoniae.
Descriptor: GLYCEROL, PTS system, lactose-specific IIBC components
Authors:Cuff, M.E, Chhor, G, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-06-03
Release date:2010-09-08
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the lactose-specific IIB component domain of the phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) from Streptococcus pneumoniae.
TO BE PUBLISHED
3UH8
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BU of 3uh8 by Molmil
N-terminal domain of phage TP901-1 ORF48
Descriptor: ORF48
Authors:Veesler, D, Spinelli, S, Mahony, J, Lichiere, J, Blangy, S, Bricogne, G, Legrand, P, Ortiz-Lombardia, M, Campanacci, V.I, van Sinderen, D, Cambillau, C.
Deposit date:2011-11-03
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
2I1S
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BU of 2i1s by Molmil
Crystal Structure of Protein of Unknown Function MM3350 from Methanosarcina mazei Go1
Descriptor: Hypothetical protein
Authors:Nocek, B, Borovilos, M, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-14
Release date:2006-09-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of hypothetical protein MM_3350 from Methanosarcina mazei Go1
TO BE PUBLISHED
2YAK
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BU of 2yak by Molmil
Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine ligand (OSV)
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE 1, RUTHENIUM OCTASPORINE 4
Authors:Feng, L, Geisselbrecht, Y, Blanck, S, Wilbuer, A, Atilla-Gokcumen, G.E, Filippakopoulos, P, Kraeling, K, Celik, M.A, Harms, K, Maksimoska, J, Marmorstein, R, Frenking, G, Knapp, S, Essen, L.-O, Meggers, E.
Deposit date:2011-02-23
Release date:2011-04-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structurally Sophisticated Octahedral Metal Complexes as Highly Selective Protein Kinase Inhibitors.
J.Am.Chem.Soc., 133, 2011
2OQT
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BU of 2oqt by Molmil
Structural Genomics, the crystal structure of a putative PTS IIA domain from Streptococcus pyogenes M1 GAS
Descriptor: Hypothetical protein SPy0176
Authors:Tan, K, Wu, R, Osipiuk, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-02-01
Release date:2007-03-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:The crystal structure of a putative PTS IIA domain from Streptococcus pyogenes M1 GAS
To be Published
5HNH
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BU of 5hnh by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
Descriptor: DNA (5'-D(*GP*(YPY)P*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*T*(YPY)*(YPY)*C)-3'), Restriction endonuclease R.BpuJI
Authors:Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
Deposit date:2016-01-18
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.876 Å)
Cite:Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
3V45
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BU of 3v45 by Molmil
Crystal Structure of de novo designed serine hydrolase OSH55, Northeast Structural Genomics Consortium Target OR130
Descriptor: CHLORIDE ION, SODIUM ION, Serine hydrolase OSH55
Authors:Kuzin, A, Su, M, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Rajagopalan, S, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-12-14
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
5HNF
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BU of 5hnf by Molmil
Crystal structure of pyrene- and phenanthrene-modified DNA in complex with the BpuJ1 endonuclease binding domain
Descriptor: DNA (5'-D(*GP*(YPE)P*AP*CP*CP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*(YPF)P*C)-3'), Restriction endonuclease R.BpuJI
Authors:Probst, M, Aeschimann, W, Chau, T.-T.-H, Langenegger, S.M, Stocker, A, Haener, R.
Deposit date:2016-01-18
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.546 Å)
Cite:Structural insight into DNA-assembled oligochromophores: crystallographic analysis of pyrene- and phenanthrene-modified DNA in complex with BpuJI endonuclease.
Nucleic Acids Res., 44, 2016
3V2Y
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BU of 3v2y by Molmil
Crystal Structure of a Lipid G protein-Coupled Receptor at 2.80A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Sphingosine 1-phosphate receptor 1, Lysozyme chimera (E.C.3.2.1.17), ...
Authors:Hanson, M.A, Roth, C.B, Jo, E, Griffith, M.T, Scott, F.L, Reinhart, G, Desale, H, Clemons, B, Cahalan, S.M, Schuerer, S.C, Sanna, M.G, Han, G.W, Kuhn, P, Rosen, H, Stevens, R.C, GPCR Network (GPCR)
Deposit date:2011-12-12
Release date:2012-02-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a lipid G protein-coupled receptor.
Science, 335, 2012
1YZF
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BU of 1yzf by Molmil
Crystal structure of the lipase/acylhydrolase from Enterococcus faecalis
Descriptor: lipase/acylhydrolase
Authors:Zhang, R, Hatzos, C, Clancy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-02-28
Release date:2005-04-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the lipase/acylhydrolase from Enterococcus faecalis
To be Published
4KYB
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BU of 4kyb by Molmil
Crystal Structure of de novo designed serine hydrolase OSH55.14_E3, Northeast Structural Genomics Consortium Target OR342
Descriptor: Designed Protein OR342, PHOSPHATE ION
Authors:Kuzin, A, Lew, S, Rajagopalan, S, Seetharaman, J, Mao, L, Xiao, R, Lee, D, Raja, S, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-05-28
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.909 Å)
Cite:Northeast Structural Genomics Consortium Target OR342
To be Published
4L97
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BU of 4l97 by Molmil
Structure of the RBP of lactococcal phage 1358 in complex with glucose-1-phosphate
Descriptor: 1-O-phosphono-alpha-D-glucopyranose, Receptor Binding Protein
Authors:Farenc, C, Spinelli, S, Bebeacua, C, Tremblay, D, Orlov, I, Blangy, S, Klaholz, B.P, Moineau, S, Cambillau, C.
Deposit date:2013-06-18
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:A Virulent Siphophage CyoEM Structure and Host Recognition and Infection Mechanism
To be Published
3O5V
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BU of 3o5v by Molmil
The Crystal Structure of the Creatinase/Prolidase N-terminal domain of an X-PRO dipeptidase from Streptococcus pyogenes to 1.85A
Descriptor: CHLORIDE ION, GLYCEROL, X-PRO dipeptidase
Authors:Stein, A.J, Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-07-28
Release date:2010-08-11
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of the Creatinase/Prolidase N-terminal domain of an X-PRO dipeptidase from Streptococcus pyogenes to 1.85A
To be Published
6S44
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BU of 6s44 by Molmil
Faba bean necrotic stunt virus (FBNSV)
Descriptor: Capsid protein
Authors:Trapani, S, Lai Kee Him, J, Blanc, S, Bron, P.
Deposit date:2019-06-26
Release date:2020-07-15
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structure-guided mutagenesis of the capsid protein indicates that a nanovirus requires assembled viral particles for systemic infection.
Plos Pathog., 19, 2023
4IOS
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BU of 4ios by Molmil
Structure of phage TP901-1 RBP (ORF49) in complex with nanobody 11.
Descriptor: BPP, GLYCEROL, Llama nanobody 11
Authors:Desmyter, A, Farenc, C, Mahony, J, Spinelli, S, Bebeacua, C, Blangy, S, Veesler, D, van Sinderen, D, Cambillau, C.
Deposit date:2013-01-08
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Viral infection modulation and neutralization by camelid nanobodies
Proc.Natl.Acad.Sci.USA, 110, 2013
3FT8
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BU of 3ft8 by Molmil
Structure of HSP90 bound with a noval fragment.
Descriptor: (5E,7S)-2-amino-7-(4-fluoro-2-pyridin-3-ylphenyl)-4-methyl-7,8-dihydroquinazolin-5(6H)-one oxime, Heat shock protein HSP 90-alpha
Authors:Barker, J.B, Cheng, R.K.Y, Palan, S, Felicetti, B.
Deposit date:2009-01-12
Release date:2009-06-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-based identification of Hsp90 inhibitors.
Chemmedchem, 4, 2009
3FT5
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BU of 3ft5 by Molmil
Structure of HSP90 bound with a novel fragment
Descriptor: 4-methyl-7,8-dihydro-5H-thiopyrano[4,3-d]pyrimidin-2-amine, Heat shock protein HSP 90-alpha
Authors:Barker, J.B, Mather, O, Cheng, R.K.Y, Palan, S, Felicetti, B.
Deposit date:2009-01-12
Release date:2009-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-based Identification of Hsp90 Inhibitors.
Chemmedchem, 4, 2009
5HX0
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BU of 5hx0 by Molmil
Crystal structure of unknown function protein Dfer_1899 fromDyadobacter fermentans DSM 18053
Descriptor: ACETATE ION, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Chang, C, Duke, N, Clancy, S, Chhor, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-01-29
Release date:2016-02-17
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Crystal structure of unknown function protein Dfer_1899 fromDyadobacter fermentans DSM 18053
To Be Published
4J4Z
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BU of 4j4z by Molmil
Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Designed serine hydrolase variant OSH55.4_H1.2, ...
Authors:Kuzin, A.P, Lew, S, Rajagopalan, S, Maglaqui, M, Xiao, R, Lee, D, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-02-07
Release date:2013-03-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structure of the improved variant of the evolved serine hydrolase, OSH55.4_H1.2, bond with sulfate ion in the active site, Northeast Structural Genomics Consortium (NESG) Target OR301
To be Published
5AEQ
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BU of 5aeq by Molmil
Neuronal calcium sensor (NCS-1)from Rattus norvegicus
Descriptor: CALCIUM ION, NEURONAL CALCIUM SENSOR 1, SODIUM ION
Authors:Saleem, M, Karuppiah, V, Pandalaneni, S, Burgoyne, R, Derrick, J.P, Lian, L.Y.
Deposit date:2015-01-08
Release date:2015-02-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Neuronal Calcium Sensor-1 Binds the D2 Dopamine Receptor and G-Protein-Coupled Receptor Kinase 1 (Grk1) Peptides Using Different Modes of Interactions.
J.Biol.Chem., 290, 2015
2OZZ
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BU of 2ozz by Molmil
Crystal structure of YhfZ from Shigella flexneri
Descriptor: Hypothetical protein yhfZ, SULFATE ION
Authors:Kim, Y, Borovilos, M, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-02-28
Release date:2007-03-27
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Structure of YhfZ from Shigella flexneri
To be Published

225946

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