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PDB: 309 results

2VOB
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TRYPANOTHIONE SYNTHETASE
Descriptor: CHLORIDE ION, TRYPANOTHIONE SYNTHETASE
Authors:Fyfe, P.K, Oza, S.L, Fairlamb, A.H, Hunter, W.N.
Deposit date:2008-02-13
Release date:2008-05-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Leishmania Trypanothione Synthetase-Amidase Structure Reveals a Basis for Regulation of Conflicting Synthetic and Hydrolytic Activities.
J.Biol.Chem., 283, 2008
3S61
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Reduced Form of Ornithine Hydroxylase (PvdA) from Pseudomonas aeruginosa
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, L-ornithine, L-ornithine 5-monooxygenase, ...
Authors:Olucha, J, Lamb, A.L.
Deposit date:2011-05-23
Release date:2011-07-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Two Structures of an N-Hydroxylating Flavoprotein Monooxygenase: ORNITHINE HYDROXYLASE FROM PSEUDOMONAS AERUGINOSA.
J.Biol.Chem., 286, 2011
3SQW
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Structure of Mss116p (NTE deletion) bound to ssRNA and AMP-PNP
Descriptor: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2011-07-06
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.909 Å)
Cite:High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
3OUF
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Structure of a K+ selective NaK mutant
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, POTASSIUM ION, Potassium channel protein
Authors:Derebe, M.G, Sauer, D.B, Zeng, W, Alam, A, Shi, N, Jiang, Y.
Deposit date:2010-09-14
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Tuning the ion selectivity of tetrameric cation channels by changing the number of ion binding sites.
Proc.Natl.Acad.Sci.USA, 108, 2011
3OGZ
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Protein structure of USP from L. major in Apo-form
Descriptor: GLYCEROL, UDP-sugar pyrophosphorylase
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
2VPM
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Trypanothione synthetase
Descriptor: BROMIDE ION, CHLORIDE ION, TRYPANOTHIONE SYNTHETASE
Authors:Fyfe, P.K, Oza, S.L, Fairlamb, A.H, Hunter, W.N.
Deposit date:2008-03-03
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Leishmania Trypanothione Synthetase-Amidase Structure Reveals a Basis for Regulation of Conflicting Synthetic and Hydrolytic Activities.
J.Biol.Chem., 283, 2008
2VPS
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Structure Of The Bifunctional Leishmania Major Trypanothione Synthetase-Amidase
Descriptor: BROMIDE ION, CHLORIDE ION, TRYPANOTHIONE SYNTHETASE
Authors:Fyfe, P.K, Oza, S.L, Fairlamb, A.H, Hunter, W.N.
Deposit date:2008-03-04
Release date:2008-05-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Leishmania Trypanothione Synthetase-Amidase Structure Reveals a Basis for Regulation of Conflicting Synthetic and Hydrolytic Activities.
J.Biol.Chem., 283, 2008
2VUP
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Crystal structure of a type II tryparedoxin-dependant peroxidase from Trypanosoma brucei
Descriptor: GLUTATHIONE PEROXIDASE-LIKE PROTEIN
Authors:Alphey, M.S, Konig, J, Fairlamb, A.H.
Deposit date:2008-05-28
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Mechanistic Insights Into Type II Trypanosomatid Tryparedoxin-Dependent Peroxidases.
Biochem.J., 414, 2008
3RET
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BU of 3ret by Molmil
Salicylate and Pyruvate Bound Structure of the Isochorismate-Pyruvate Lyase K42E Mutant from Pseudomonas aerugionsa
Descriptor: 2-HYDROXYBENZOIC ACID, PYRUVIC ACID, Salicylate biosynthesis protein pchB
Authors:Olucha, J, Ouellette, A.N, Luo, Q, Lamb, A.L.
Deposit date:2011-04-05
Release date:2011-07-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:pH Dependence of Catalysis by Pseudomonas aeruginosa Isochorismate-Pyruvate Lyase: Implications for Transition State Stabilization and the Role of Lysine 42.
Biochemistry, 50, 2011
3OH3
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Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE -Arabinose
Descriptor: GLYCEROL, UDP-sugar pyrophosphorylase, [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2S,3R,4S,5S)-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl dihydrogen diphosphate
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3OH2
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Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE-GALACTOSE
Descriptor: GALACTOSE-URIDINE-5'-DIPHOSPHATE, GLYCEROL, UDP-sugar pyrophosphorylase
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3SQX
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BU of 3sqx by Molmil
Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP
Descriptor: ATP-dependent RNA helicase MSS116, mitochondrial, MAGNESIUM ION, ...
Authors:Del Campo, M, Lambowitz, A.M.
Deposit date:2011-07-06
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.112 Å)
Cite:High-Throughput Genetic Identification of Functionally Important Regions of the Yeast DEAD-Box Protein Mss116p.
J.Mol.Biol., 413, 2011
3E8B
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Crystal Structure of the the open NaK channel- Rb+ complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Potassium channel protein, RUBIDIUM ION
Authors:Jiang, Y, Alam, A.
Deposit date:2008-08-19
Release date:2008-12-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of ion selectivity in the NaK channel
Nat.Struct.Mol.Biol., 16, 2009
2XIM
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BU of 2xim by Molmil
ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS
Descriptor: D-XYLOSE ISOMERASE, MAGNESIUM ION, Xylitol
Authors:Mrabet, N.T, Van Denbroek, A, Van Den Brande, I, Stanssens, P, Laroche, Y, Lambeir, A.-M, Matthyssens, G, Jenkins, J, Chiadmi, M, Vantilbeurgh, H, Rey, F, Janin, J, Quax, W.J, Lasters, I, Demaeyer, M, Wodak, S.J.
Deposit date:1991-05-29
Release date:1993-04-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Arginine residues as stabilizing elements in proteins.
Biochemistry, 31, 1992
3PP3
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Epitope characterization and crystal structure of GA101 provide insights into the molecular basis for the type I / type II distinction of anti- CD20 antibodies
Descriptor: GA101 Fab heavy chain, GA101 Fab light chain
Authors:Hopfner, K.-P, Lammens, A.
Deposit date:2010-11-24
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.508 Å)
Cite:Epitope characterization and crystal structure of GA101 provide insights into the molecular basis for type I/II distinction of CD20 antibodies.
Blood, 118, 2011
3OH0
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BU of 3oh0 by Molmil
Protein structure of USP from L. major bound to URIDINE-5'-TRIPHOSPHATE
Descriptor: GLYCEROL, UDP-sugar pyrophosphorylase, URIDINE 5'-TRIPHOSPHATE
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3OH4
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BU of 3oh4 by Molmil
Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE Glucose
Descriptor: GLYCEROL, UDP-sugar pyrophosphorylase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F.H, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3OH1
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Protein structure of USP from L. major bound to URIDINE-5'-DIPHOSPHATE-Galacturonic acid
Descriptor: (2S,3R,4S,5R,6R)-6-[[[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4,5-trihydroxy-oxane-2-carboxylic acid, GLYCEROL, UDP-sugar pyrophosphorylase
Authors:Dickmanns, A, Damerow, S, Neumann, P, Schulz, E.-C, Lamerz, A, Routier, F, Ficner, R.
Deposit date:2010-08-17
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis for the broad substrate range of the UDP-sugar pyrophosphorylase from Leishmania major.
J.Mol.Biol., 405, 2011
3E83
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Crystal Structure of the the open NaK channel pore
Descriptor: CESIUM ION, Potassium channel protein, SODIUM ION
Authors:Jiang, Y, Alam, A.
Deposit date:2008-08-19
Release date:2008-12-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of ion selectivity in the NaK channel
Nat.Struct.Mol.Biol., 16, 2009
4M28
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BU of 4m28 by Molmil
UDP-Glucose Pyrophosphorylase from Leishmania major in complex with UTP analog dUpCpp
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine, UDP-glucose pyrophosphorylase
Authors:Fuehring, J.I, Routier, F.H, Lamerz, A.-C, Baruch, P, Gerardy-Schahn, R, Fedorov, R.
Deposit date:2013-08-05
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Catalytic mechanism and allosteric regulation of UDP-glucose pyrophosphorylase from Leishmania major
ACS CATALYSIS, 3, 2013
3RA7
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Bispecific digoxigenin binding antibodies for targeted payload delivery
Descriptor: DIGOXIGENIN, Fab fragment, heavy chain, ...
Authors:Hopfner, K.P, Lammens, A.
Deposit date:2011-03-27
Release date:2011-07-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Bispecific digoxigenin-binding antibodies for targeted payload delivery
Proc.Natl.Acad.Sci.USA, 108, 2011
3OUS
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BU of 3ous by Molmil
MthK channel pore T59A mutant
Descriptor: Calcium-gated potassium channel mthK, POTASSIUM ION
Authors:Derebe, M.G, Sauer, D.B, Zeng, W, Alam, A, Shi, N, Jiang, Y.
Deposit date:2010-09-15
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Tuning the ion selectivity of tetrameric cation channels by changing the number of ion binding sites.
Proc.Natl.Acad.Sci.USA, 108, 2011
8PJ8
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BU of 8pj8 by Molmil
FKBP51FK1 F67E/K60Orn (i, i+7) in complex with SAFit1
Descriptor: 2-[3-[(1~{R})-1-[(2~{S})-1-[(2~{S})-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidin-2-yl]carbonyloxy-3-(3,4-dimethoxyphenyl)propyl]phenoxy]ethanoic acid, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Meyners, C, Charalampidou, A, Hausch, F.
Deposit date:2023-06-23
Release date:2024-03-06
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Automated Flow Peptide Synthesis Enables Engineering of Proteins with Stabilized Transient Binding Pockets.
Acs Cent.Sci., 10, 2024
8PJA
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BU of 8pja by Molmil
FKBP51FK1 F67E/K58 (i, i+9) in complex with SAFit1
Descriptor: 2-[3-[(1~{R})-1-[(2~{S})-1-[(2~{S})-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidin-2-yl]carbonyloxy-3-(3,4-dimethoxyphenyl)propyl]phenoxy]ethanoic acid, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Meyners, C, Charalampidou, A, Hausch, F.
Deposit date:2023-06-23
Release date:2024-03-06
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Automated Flow Peptide Synthesis Enables Engineering of Proteins with Stabilized Transient Binding Pockets.
Acs Cent.Sci., 10, 2024
7L5O
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Crystal structure of the noncovalently bonded complex of rilzabrutinib with BTK
Descriptor: (2E)-2-{(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl}-4-methyl-4-[4-(oxetan-3-yl)piperazin-1-yl]pent-2-enenitrile, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Bradshaw, J.M, Brameld, K.A, Mrosek, M, Lammens, A, Blaesse, M.
Deposit date:2020-12-22
Release date:2022-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:The Discovery Rilzabrutinib (PRN1008): A Reversible Covalent BTK Inhibitor for Immune Mediated Diseases
To Be Published

222415

PDB entries from 2024-07-10

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