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PDB: 382 results

3DYN
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human phosphodiestrase 9 in complex with cGMP (Zn inhibited)
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, CYCLIC GUANOSINE MONOPHOSPHATE, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, ...
Authors:Liu, S, Mansour, M.N, Dillman, K, Perez, J, Danley, D, Menniti, F.
Deposit date:2008-07-28
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the catalytic mechanism of human phosphodiesterase 9.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DYS
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BU of 3dys by Molmil
human phosphodiestrase-5'GMP complex (EP), produced by soaking with 20mM cGMP+20 mM MnCl2+20 mM MgCl2 for 2 hours, and flash-cooled to liquid nitrogen temperature when substrate was still abudant.
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, FORMIC ACID, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Liu, S, Mansour, M.N, Dillman, K, Perez, J, Danley, D, Menniti, F.
Deposit date:2008-07-28
Release date:2008-09-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the catalytic mechanism of human phosphodiesterase 9.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DYQ
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human phosphodiestrase 9 (inhibited by omitting divalent cation) in complex with cGMP
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, CYCLIC GUANOSINE MONOPHOSPHATE, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, ...
Authors:Liu, S, Mansour, M.N, Dillman, K, Perez, J, Danley, D, Menniti, F.
Deposit date:2008-07-28
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the catalytic mechanism of human phosphodiesterase 9.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1OQF
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BU of 1oqf by Molmil
Crystal structure of the 2-methylisocitrate lyase
Descriptor: 2-methylisocitrate lyase
Authors:Liu, S, Lu, Z, Dunaway-Mariano, D, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:2003-03-08
Release date:2004-04-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structures of 2-methylisocitrate lyase in complex with product and with isocitrate inhibitor provide insight into lyase substrate specificity, catalysis and evolution.
Biochemistry, 44, 2005
2OZB
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BU of 2ozb by Molmil
Structure of a human Prp31-15.5K-U4 snRNA complex
Descriptor: CALCIUM ION, RNA comprising the 5' Stem-Loop RNA of U4snRNA, U4/U6 small nuclear ribonucleoprotein Prp31, ...
Authors:Liu, S, Luehrmann, R, Wahl, M.C.
Deposit date:2007-02-26
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Binding of the human Prp31 Nop domain to a composite RNA-protein platform in U4 snRNP.
Science, 316, 2007
3BLT
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BU of 3blt by Molmil
Crystal structures of YopH complexed with PVSN and PVS, inhibitors of YopH which co-valent bind to Cys of active site
Descriptor: Tyrosine-protein phosphatase yopH, phenyl ethenesulfonate
Authors:Liu, S, Zhang, Z.-Y.
Deposit date:2007-12-11
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Aryl vinyl sulfonates and sulfones as active site-directed and mechanism-based probes for protein tyrosine phosphatases.
J.Am.Chem.Soc., 130, 2008
8G9V
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BU of 8g9v by Molmil
Crystal structures of 17-beta-hydroxysteroid dehydrogenase 13
Descriptor: 17-beta-hydroxysteroid dehydrogenase 13, 4-{[2,5-dimethyl-3-(4-methylbenzene-1-sulfonyl)benzene-1-sulfonyl]amino}benzoic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Liu, S.
Deposit date:2023-02-22
Release date:2023-08-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.645 Å)
Cite:Structural basis of lipid-droplet localization of 17-beta-hydroxysteroid dehydrogenase 13.
Nat Commun, 14, 2023
1S2U
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BU of 1s2u by Molmil
Crystal structure of the D58A phosphoenolpyruvate mutase mutant protein
Descriptor: DI(HYDROXYETHYL)ETHER, Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
8EQB
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FAM46C/BCCIPalpha/Nanobody complex
Descriptor: Isoform 2 of BRCA2 and CDKN1A-interacting protein, Synthetic nanobody 1, Terminal nucleotidyltransferase 5C
Authors:Liu, S, Chen, H, Yin, Y, Bai, X, Zhang, X.
Deposit date:2022-10-07
Release date:2023-03-15
Last modified:2023-04-26
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Inhibition of FAM46/TENT5 activity by BCCIP alpha adopting a unique fold.
Sci Adv, 9, 2023
8EXE
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BU of 8exe by Molmil
Crystal structure of human FAM46A-BCCIPa complex at 3.5 angstrom resolution
Descriptor: Isoform 2 of BRCA2 and CDKN1A-interacting protein, Terminal nucleotidyltransferase 5A
Authors:Liu, S, Zhang, X.
Deposit date:2022-10-25
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Inhibition of FAM46/TENT5 activity by BCCIP alpha adopting a unique fold.
Sci Adv, 9, 2023
8EXF
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BU of 8exf by Molmil
Crystal structure of human FAM46A-BCCIPa complex at 3.2 angstrom resolution
Descriptor: BCCIPa, Terminal nucleotidyltransferase 5A
Authors:Liu, S, Zhang, X.
Deposit date:2022-10-25
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Inhibition of FAM46/TENT5 activity by BCCIP alpha adopting a unique fold.
Sci Adv, 9, 2023
3BLU
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crystal structure YopH complexed with inhibitor PVS
Descriptor: (ethenylsulfonyl)benzene, Tyrosine-protein phosphatase yopH
Authors:Liu, S, Zhang, Z.-Y.
Deposit date:2007-12-11
Release date:2008-10-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Aryl vinyl sulfonates and sulfones as active site-directed and mechanism-based probes for protein tyrosine phosphatases
J.Am.Chem.Soc., 130, 2008
1S2V
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BU of 1s2v by Molmil
Crystal structure of phosphoenolpyruvate mutase complexed with Mg(II)
Descriptor: MAGNESIUM ION, Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
8CUH
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BU of 8cuh by Molmil
Crystal structure of human TEAD2 complexed with its inhibitor TM2.
Descriptor: 4-[3-(2-cyclohexylethoxy)benzoyl]-N-phenylpiperazine-1-carboxamide, Transcriptional enhancer factor TEF-4
Authors:Liu, S, Luo, X.
Deposit date:2022-05-17
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of a new class of reversible TEA-domain transcription factor inhibitors with a novel binding mode.
Elife, 11, 2022
1S2T
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BU of 1s2t by Molmil
Crystal Structure Of Apo Phosphoenolpyruvate Mutase
Descriptor: Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
4LTY
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BU of 4lty by Molmil
Crystal Structure of E.coli SbcD at 1.8 A Resolution
Descriptor: Exonuclease subunit SbcD, GLYCEROL
Authors:Liu, S, Tian, L.F, Yan, X.X, Liang, D.C.
Deposit date:2013-07-24
Release date:2014-02-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for DNA recognition and nuclease processing by the Mre11 homologue SbcD in double-strand breaks repair.
Acta Crystallogr.,Sect.D, 70, 2014
5HI4
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BU of 5hi4 by Molmil
Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists
Descriptor: (9'S,17'R)-6'-chloro-N-methyl-9'-{[(1-methyl-1H-pyrazol-5-yl)carbonyl]amino}-10',19'-dioxo-2'-oxa-11',18'-diazaspiro[cyclopentane-1,21'-tetracyclo[20.2.2.2~12,15~.1~3,7~]nonacosane]-1'(24'),3'(29'),4',6',12',14',22',25',27'-nonaene-17'-carboxamide, CAT-2000 FAB heavy chain, CAT-2000 FAB light chain, ...
Authors:Liu, S.
Deposit date:2016-01-11
Release date:2016-08-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists.
Sci Rep, 6, 2016
5HI5
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Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists
Descriptor: (4S,20R)-7-chloro-N-methyl-4-{[(1-methyl-1H-pyrazol-5-yl)carbonyl]amino}-3,18-dioxo-2,19-diazatetracyclo[20.2.2.1~6,10~.1~11,15~]octacosa-1(24),6(28),7,9,11(27),12,14,22,25-nonaene-20-carboxamide, CAT-2000 FAB heavy chain, CAT-2000 light chain, ...
Authors:Liu, S.
Deposit date:2016-01-11
Release date:2016-08-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists.
Sci Rep, 6, 2016
4ZP5
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BU of 4zp5 by Molmil
MAP4K4 in complex with inhibitor
Descriptor: 4-[5-(4-chlorophenyl)-1,3-oxazol-2-yl]benzamide, Mitogen-activated protein kinase kinase kinase kinase 4
Authors:Liu, S.
Deposit date:2015-05-07
Release date:2016-10-05
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structure of MAP4K4 complex
To Be Published
5HI3
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BU of 5hi3 by Molmil
Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists
Descriptor: CAT-2000 FAB heavy chain, CAT-2000 FAB light chain, Interleukin-17A, ...
Authors:Liu, S.
Deposit date:2016-01-11
Release date:2016-08-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Binding site elucidation and structure guided design of macrocyclic IL-17A antagonists.
Sci Rep, 6, 2016
6LA5
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BU of 6la5 by Molmil
Cryo-EM structure of echovirus 11 complexed with its attaching receptor CD55 at pH 7.4
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Liu, S, Gao, F.G.
Deposit date:2019-11-12
Release date:2020-10-07
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Molecular and structural basis of Echovirus 11 infection by using the dual-receptor system of CD55 and FcRn.
Chin.Sci.Bull., 2020
6LB1
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BU of 6lb1 by Molmil
Cryo-EM structure of echovirus 11 A-particle at pH 5.5
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Liu, S, Gao, F.G.
Deposit date:2019-11-13
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Molecular and structural basis of Echovirus 11 infection by using the dual-receptor system of CD55 and FcRn.
Chin.Sci.Bull., 2020
6LA7
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BU of 6la7 by Molmil
Cryo-EM structure of echovirus 11 complexed with its uncoating receptor FcRn at pH 5.5
Descriptor: Beta-2-microglobulin, Capsid protein VP1, Capsid protein VP2, ...
Authors:Liu, S, Gao, F.G.
Deposit date:2019-11-12
Release date:2020-10-07
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Molecular and structural basis of Echovirus 11 infection by using the dual-receptor system of CD55 and FcRn.
Chin.Sci.Bull., 2020
6LA3
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Cryo-EM structure of full echovirus 11 particle at pH 7.4
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Liu, S, Gao, F.G.
Deposit date:2019-11-11
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.32 Å)
Cite:Molecular and structural basis of Echovirus 11 infection by using the dual-receptor system of CD55 and FcRn.
Chin.Sci.Bull., 2020
6LAO
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BU of 6lao by Molmil
Cryo-EM structure of echovirus 11 complexed with its attaching receptor CD55 at pH 5.5
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Liu, S, Gao, F.G.
Deposit date:2019-11-12
Release date:2020-10-07
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Molecular and structural basis of Echovirus 11 infection by using the dual-receptor system of CD55 and FcRn.
Chin.Sci.Bull., 2020

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PDB entries from 2024-09-11

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