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PDB: 1114 件

1Z0Z
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Crystal structure of a NAD kinase from Archaeoglobus fulgidus in complex with NAD
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Probable inorganic polyphosphate/ATP-NAD kinase
著者Liu, J, Lou, Y, Yokota, H, Adams, P.D, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2005-03-02
公開日2005-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal Structures of an NAD Kinase from Archaeoglobus fulgidus in Complex with ATP, NAD, or NADP
J.Mol.Biol., 354, 2005
426D
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THE STRUCTURE OF MOST STUDIED DNA FRAGMENT CHANGES UNDER THE INFLUENCE OF IONS: A NEW PACKING OF D(CGCGAATTCGCG)
分子名称: 5'-D(CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', CALCIUM ION
著者Liu, J, Malinina, L, Subirana, J.A.
登録日1998-09-17
公開日1998-11-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the most studied DNA fragment changes under the influence of ions: a new packing of d(CGCGAATTCGCG).
FEBS Lett., 438, 1998
1SUM
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Crystal structure of a hypothetical protein at 2.0 A resolution
分子名称: CALCIUM ION, FE (III) ION, NICKEL (II) ION, ...
著者Liu, J, Lou, Y, Yokota, H, Adams, P.D, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2004-03-26
公開日2004-08-24
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a PhoU protein homologue: a new class of metalloprotein containing multinuclear iron clusters.
J.Biol.Chem., 280, 2005
3I6G
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Newly identified epitope Mn2 from SARS-CoV M protein complexed withHLA-A*0201
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Liu, J.
登録日2009-07-07
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献The membrane protein of severe acute respiratory syndrome coronavirus acts as a dominant immunogen revealed by a clustering region of novel functionally and structurally defined cytotoxic T-lymphocyte epitopes.
J.INFECT.DIS., 202, 2010
3I6K
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Newly identified epitope from SARS-CoV membrane protein complexed with HLA-A*0201
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A-2 alpha chain, ...
著者Liu, J, Sun, Y, Qi, J, Chu, F, Wu, H, Gao, F, Li, T, Yan, J, Gao, G.F.
登録日2009-07-07
公開日2010-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The membrane protein of severe acute respiratory syndrome coronavirus acts as a dominant immunogen revealed by a clustering region of novel functionally and structurally defined cytotoxic T-lymphocyte epitopes
J Infect Dis, 202, 2010
5WWD
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Crystal structure of AtNUDX1
分子名称: AMMONIUM ION, GLYCEROL, MAGNESIUM ION, ...
著者Liu, J, Guan, Z, Yan, L, Zou, T, Yin, P.
登録日2016-12-31
公開日2017-11-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.386 Å)
主引用文献Structural Insights into the Substrate Recognition Mechanism of Arabidopsis GPP-Bound NUDX1 for Noncanonical Monoterpene Biosynthesis.
Mol Plant, 11, 2018
5WY6
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Crystal structure of AtNUDX1 (E56A)
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Nudix hydrolase 1, ...
著者Liu, J, Guan, Z, Yan, L, Zou, T, Yin, P.
登録日2017-01-11
公開日2017-11-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.779 Å)
主引用文献Structural Insights into the Substrate Recognition Mechanism of Arabidopsis GPP-Bound NUDX1 for Noncanonical Monoterpene Biosynthesis.
Mol Plant, 11, 2018
1OY5
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Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus
分子名称: tRNA (Guanine-N(1)-)-methyltransferase
著者Liu, J, Wang, W, Shin, D.H, Yokota, H, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2003-04-03
公開日2003-11-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of tRNA (m1G37) methyltransferase from Aquifex aeolicus at 2.6 A resolution: a novel methyltransferase fold.
Proteins, 53, 2003
5F1I
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MHC with 9-mer peptide
分子名称: 9-mer peptide, Beta2M, MHC class I DLA-88
著者Liu, J, Chai, Y, QI, J, Gao, G.F.
登録日2015-11-30
公開日2016-11-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.904 Å)
主引用文献Diversified Anchoring Features the Peptide Presentation of DLA-88*50801: First Structural Insight into Domestic Dog MHC Class I
J Immunol., 197, 2016
1SU0
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Crystal structure of a hypothetical protein at 2.3 A resolution
分子名称: NifU like protein IscU, ZINC ION
著者Liu, J, Oganesyan, N, Shin, D.-H, Jancarik, J, Pufan, R, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
登録日2004-03-25
公開日2004-08-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural characterization of an iron-sulfur cluster assembly protein IscU in a zinc-bound form.
Proteins, 59, 2005
1Z0U
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Crystal structure of a NAD kinase from Archaeoglobus fulgidus bound by NADP
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Probable inorganic polyphosphate/ATP-NAD kinase, SULFATE ION
著者Liu, J, Lou, Y, Yokota, H, Adams, P.D, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2005-03-02
公開日2005-04-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structures of an NAD Kinase from Archaeoglobus fulgidus in Complex with ATP, NAD, or NADP
J.Mol.Biol., 354, 2005
3J3T
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Structural dynamics of the MecA-ClpC complex revealed by cryo-EM
分子名称: Adapter protein MecA 1, Negative regulator of genetic competence ClpC/MecB
著者Liu, J, Mei, Z, Li, N, Qi, Y, Xu, Y, Shi, Y, Wang, F, Lei, J, Gao, N.
登録日2013-04-18
公開日2013-05-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Structural dynamics of the MecA-ClpC complex: a type II AAA+ protein unfolding machine.
J.Biol.Chem., 288, 2013
5YJ8
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Identification of a small molecule inhibitor for the Tudor domain of TDRD3
分子名称: 5-(aminomethyl)-1,3-dimethyl-benzimidazol-2-one, SULFATE ION, Tudor domain-containing protein 3
著者Liu, J, Ruan, K.
登録日2017-10-09
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.762 Å)
主引用文献Structural plasticity of the TDRD3 Tudor domain probed by a fragment screening hit.
FEBS J., 285, 2018
8F5Q
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Crystal structure of human PCNA in complex with the PIP box of FBH1
分子名称: F-box DNA helicase 1, Proliferating cell nuclear antigen
著者Liu, J, Chaves-Arquero, B, Wei, P, Tencer, H, Zhang, G, Blanco, F, Kutateladze, T.
登録日2022-11-15
公開日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular insight into the PCNA-binding mode of FBH1.
Structure, 31, 2023
7F5T
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Drosophila P5CS filament with glutamate
分子名称: Delta-1-pyrroline-5-carboxylate synthase, GLUTAMIC ACID
著者Liu, J.L, Zhong, J, Guo, C.J, Zhou, X.
登録日2021-06-22
公開日2022-05-18
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of dynamic P5CS filaments.
Elife, 11, 2022
4U88
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Structure of the DNA-Binding Domain of the Response Regulator SaeR from Staphylococcus aureus
分子名称: Transcriptional regulator SaeR
著者Liu, J.S, Huang, C.H, Yang, C.S, Chen, S.C, Chen, Y.
登録日2014-08-01
公開日2015-08-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.355 Å)
主引用文献Structure of the DNA-Binding Domain of the Response Regulator SaeR from Staphylococcus aureus
To Be Published
1V1Q
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Crystal structure of PriB- a primosomal DNA replication protein of Escherichia coli
分子名称: CYSTEINE, PRIMOSOMAL REPLICATION PROTEIN N
著者Liu, J.-H, Chang, T.-W, Huang, C.-Y, Chang, M.-C, Chen, S.-U, Wu, H.-N, Hsiao, C.-D.
登録日2004-04-22
公開日2004-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of Prib- a Primosomal DNA Replication Protein of Escherichia Coli
J.Biol.Chem., 279, 2004
3H01
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Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate
分子名称: Envelope glycoprotein gp160, HEXANE-1,6-DIOL
著者Liu, J.
登録日2009-04-08
公開日2009-12-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Role of a putative gp41 dimerization domain in human immunodeficiency virus type 1 membrane fusion.
J.Virol., 84, 2010
5F1N
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MHC complexed to 11mer peptide
分子名称: Beta-2-microglobulin, MHC class I antigen, Peptide from Cytochrome P450 family 1 subfamily B polypeptide 1
著者Liu, J, Chai, Y, Qi, J, Gao, G.F.
登録日2015-11-30
公開日2016-11-30
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diversified Anchoring Features the Peptide Presentation of DLA-88*50801: First Structural Insight into Domestic Dog MHC Class I
J Immunol., 197, 2016
8EOH
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crystal structure of human Cytochrome P450 8B1 in complex with a C12-Pyridine Containing Steroid
分子名称: 12-(pyridin-3-yl)-8alpha,10alpha,13alpha,14beta-androsta-4,11-diene-3,17-dione, 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase, PROTOPORPHYRIN IX CONTAINING FE
著者Liu, J, Scott, E.E.
登録日2022-10-03
公開日2023-08-02
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Pyridine-containing substrate analogs are restricted from accessing the human cytochrome P450 8B1 active site by tryptophan 281.
J.Biol.Chem., 299, 2023
3H00
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Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate
分子名称: Envelope glycoprotein gp160
著者Liu, J.
登録日2009-04-08
公開日2009-12-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Role of a putative gp41 dimerization domain in human immunodeficiency virus type 1 membrane fusion.
J.Virol., 84, 2010
7LKY
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Crystal Structure of PHF1 Tudor domain in complex with a peptidomimetic ligand UNC6641
分子名称: DIMETHYL SULFOXIDE, Isoform 1 of PHD finger protein 1, Peptidomimetic inhibitor UNC6641, ...
著者Liu, J, Kutateladze, T.G.
登録日2021-02-03
公開日2021-12-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Discovery of an H3K36me3-Derived Peptidomimetic Ligand with Enhanced Affinity for Plant Homeodomain Finger Protein 1 (PHF1).
J.Med.Chem., 64, 2021
3G9R
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Structure of the HIV-1 gp41 Membrane-Proximal Ectodomain Region in a Putative Prefusion Conformation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Fusion complex of HIV-1 Envelope glycoprotein and Saccharomyces cerevisiae General control protein GCN4, PHOSPHATE ION
著者Liu, J, Lu, M.
登録日2009-02-13
公開日2009-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the HIV-1 gp41 Membrane-Proximal Ectodomain Region in a Putative Prefusion Conformation.
Biochemistry, 48, 2009
1T8Z
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Atomic Structure of A Novel Tryptophan-Zipper Pentamer
分子名称: DODECAETHYLENE GLYCOL, Major outer membrane lipoprotein, SULFATE ION
著者Liu, J, Yong, W, Deng, Y, Kallenbach, N.R, Lu, M.
登録日2004-05-13
公開日2004-11-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Atomic structure of a tryptophan-zipper pentamer.
Proc.Natl.Acad.Sci.USA, 101, 2004
3GWO
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Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate
分子名称: Envelope glycoprotein gp160, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500), SODIUM ION
著者Liu, J.
登録日2009-04-01
公開日2009-12-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Role of a putative gp41 dimerization domain in human immunodeficiency virus type 1 membrane fusion.
J.Virol., 84, 2010

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件を2024-08-07に公開中

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