Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 802 results

2IFA
DownloadVisualize
BU of 2ifa by Molmil
Crystal Structure of the PUTATIVE NITROREDUCTASE (SMU.260) IN COMPLEX WITH FMN FROM STREPTOCOCCUS MUTANS, NORTHEAST STRUCTURAL GENOMICS TARGET SMR5.
Descriptor: FLAVIN MONONUCLEOTIDE, Hypothetical protein SMU.260
Authors:Forouhar, F, Chen, Y, Xiao, R, Ma, L.C, Byler, T, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-09-20
Release date:2006-10-03
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:

2IM8
DownloadVisualize
BU of 2im8 by Molmil
X-Ray Crystal Structure of Protein yppE from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR213.
Descriptor: Hypothetical protein yppE, PHOSPHATE ION
Authors:Kuzin, A.P, Shastry, R, Janjua, H, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Hang, D, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-10-03
Release date:2006-10-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-Ray structure of hypothetical protein yPPE. Northeast Structural Genomics Consortium target SR213.
To be Published
2IF2
DownloadVisualize
BU of 2if2 by Molmil
Crystal Structure of the Putative Dephospho-CoA Kinase from Aquifex aeolicus, Northeast Structural Genomics Target QR72.
Descriptor: 1,2-ETHANEDIOL, Dephospho-CoA kinase, SULFATE ION
Authors:Forouhar, F, Hussain, M, Seetharaman, J, Hussain, A, Wu, M, Fang, Y, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Baran, M, Rost, B, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-09-19
Release date:2006-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:

2X82
DownloadVisualize
BU of 2x82 by Molmil
Evolutionary basis of HIV restriction by the antiretroviral TRIMCyp
Descriptor: CAPSID PROTEIN P24
Authors:Price, A.J, James, L.C.
Deposit date:2010-03-05
Release date:2010-09-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conformational Adaptation of Asian Macaque Trimcyp Directs Lineage Specific Antiviral Activity.
Plos Pathog., 6, 2010
3OZL
DownloadVisualize
BU of 3ozl by Molmil
Crystal structure of human transthyretin variant A25T in complex with flufenamic acid.
Descriptor: 2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID, Transthyretin
Authors:Lima, L.M.T.R, Palmieri, L.C, Foguel, D, Palhano, F.L.
Deposit date:2010-09-25
Release date:2011-09-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human transthyretin variant A25T in complex with flufenamic acid.
To be Published
4L4T
DownloadVisualize
BU of 4l4t by Molmil
Structure of human MAIT TCR in complex with human MR1-6-FP
Descriptor: 2-amino-4-oxo-3,4-dihydropteridine-6-carbaldehyde, Beta-2-microglobulin, MAIT T-cell receptor alpha chain, ...
Authors:Patel, O, Kjer-Nielsen, L, Le Nours, J, Eckle, S.B.G, Birkinshaw, R.W, Beddoe, T, Corbett, A.J, Liu, L, Miles, J.J, Meehan, B, Reantragoon, R, Sandoval-Romero, M.L, Sullivan, L.C, Brooks, A.G, Chen, Z, Fairlie, D.P, McCluskey, J, Rossjohn, J.
Deposit date:2013-06-09
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition of vitamin B metabolites by mucosal-associated invariant T cells.
Nat Commun, 4, 2013
2WIO
DownloadVisualize
BU of 2wio by Molmil
Structure of the histidine tagged, open cytochrome P450 Eryk from S. erythraea
Descriptor: ERYTHROMYCIN B/D C-12 HYDROXYLASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Savino, C, Montemiglio, L.C, Sciara, G, Miele, A.E, Kedrew, S.G, Gianni, S, Vallone, B.
Deposit date:2009-05-14
Release date:2009-07-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate.
J.Biol.Chem., 284, 2009
4L4V
DownloadVisualize
BU of 4l4v by Molmil
Structure of human MAIT TCR in complex with human MR1-RL-6-Me-7-OH
Descriptor: 1-deoxy-1-(7-hydroxy-6-methyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, Beta-2-microglobulin, GLYCEROL, ...
Authors:Patel, O, Kjer-Nielsen, L, Le Nours, J, Eckle, S.B.G, Birkinshaw, R.W, Beddoe, T, Corbett, A.J, Liu, L, Miles, J.J, Meehan, B, Reantragoon, R, Sandoval-Romero, M.L, Sullivan, L.C, Brooks, A.G, Chen, Z, Fairlie, D.P, McCluskey, J, Rossjohn, J.
Deposit date:2013-06-09
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recognition of vitamin B metabolites by mucosal-associated invariant T cells.
Nat Commun, 4, 2013
3OU4
DownloadVisualize
BU of 3ou4 by Molmil
MDR769 HIV-1 protease complexed with TF/PR hepta-peptide
Descriptor: HIV-1 protease, TF/PR substrate peptide
Authors:Liu, Z, Wang, Y, Brunzelle, J, Kovari, I.A, Kovari, L.C.
Deposit date:2010-09-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease.
Protein J., 30, 2011
3OU3
DownloadVisualize
BU of 3ou3 by Molmil
MDR769 HIV-1 protease complexed with PR/RT hepta-peptide
Descriptor: HIV-1 protease, PR/RT substrate peptide
Authors:Liu, Z, Wang, Y, Brunzelle, J, Kovari, I.A, Kovari, L.C.
Deposit date:2010-09-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease.
Protein J., 30, 2011
3OUC
DownloadVisualize
BU of 3ouc by Molmil
MDR769 HIV-1 protease complexed with p2/NC hepta-peptide
Descriptor: MDR HIV-1 protease, p2/NC substrate peptide
Authors:Liu, Z, Wang, Y, Brunzelle, J, Kovari, I.A, Kovari, L.C.
Deposit date:2010-09-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nine Crystal Structures Determine the Substrate Envelope of the MDR HIV-1 Protease.
Protein J., 30, 2011
3PMN
DownloadVisualize
BU of 3pmn by Molmil
ternary crystal structure of polymerase lambda variant with a GT mispair at the primer terminus with Mn2+ in the active site
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine, 5'-D(*CP*AP*GP*TP*AP*G)-3', 5'-D(*CP*GP*GP*CP*CP*TP*TP*AP*CP*TP*G)-3', ...
Authors:Bebenek, K, Pedersen, L.C, Kunkel, T.A.
Deposit date:2010-11-17
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Replication infidelity via a mismatch with Watson-Crick geometry.
Proc.Natl.Acad.Sci.USA, 108, 2011
4JO8
DownloadVisualize
BU of 4jo8 by Molmil
Crystal structure of the activating Ly49H receptor in complex with m157 (G1F strain)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Killer cell lectin-like receptor 8, M157
Authors:Berry, R, Ng, N, Saunders, P.M, Vivian, J.P, Lin, J, Deuss, F.A, Corbett, A.J, Forbes, C.A, Widjaja, J.M, Sullivan, L.C, McAlister, A.D, Perugini, M.A, Call, M.J, Scalzo, A.A, Degli-Esposti, M.A, Coudert, J.D, Beddoe, T, Brooks, A.G, Rossjohn, J.
Deposit date:2013-03-18
Release date:2013-05-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Targeting of a natural killer cell receptor family by a viral immunoevasin
Nat.Immunol., 14, 2013
2M4V
DownloadVisualize
BU of 2m4v by Molmil
Mycobacterium tuberculosis RNA polymerase binding protein A (RbpA) and its interactions with sigma factors
Descriptor: Putative uncharacterized protein
Authors:Bortoluzzi, A, Muskett, F.W, Waters, L.C, Addis, P.W, Rieck, B, Munder, T, Schleier, S, Forti, F, Ghisotti, D, Carr, M.D, O'Hare, H.M.
Deposit date:2013-02-11
Release date:2013-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mycobacterium tuberculosis RNA polymerase-binding protein A (RbpA) and its interactions with sigma factors.
J.Biol.Chem., 288, 2013
3PNC
DownloadVisualize
BU of 3pnc by Molmil
Ternary crystal structure of a polymerase lambda variant with a GT mispair at the primer terminus and sodium at catalytic metal site
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]guanosine, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*CP*AP*GP*TP*AP*G)-3', ...
Authors:Bebenek, K, Pedersen, L.C, Kunkel, T.A.
Deposit date:2010-11-18
Release date:2011-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Replication infidelity via a mismatch with Watson-Crick geometry.
Proc.Natl.Acad.Sci.USA, 108, 2011
4JVN
DownloadVisualize
BU of 4jvn by Molmil
Crystal structure of human estrogen sulfotransferase (SULT1E1) in complex with inactive cofactor PAP and metabolite of brominated flame retardant 3OH BDE47 (3-hydroxyl bromodiphenyl ether)
Descriptor: 1,2-ETHANEDIOL, 2,6-dibromo-3-(2,4-dibromophenoxy)phenol, ADENOSINE-3'-5'-DIPHOSPHATE, ...
Authors:Gosavi, R.A, Knudsen, G.A, Birnbaum, L.S, Pedersen, L.C.
Deposit date:2013-03-25
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Mimicking of Estradiol Binding by Flame Retardants and Their Metabolites: A Crystallographic Analysis.
Environ.Health Perspect., 121, 2013
2JVC
DownloadVisualize
BU of 2jvc by Molmil
NMR solution structure of ubiquitin like protein
Descriptor: ubiquitin_like protein
Authors:Tran, N.B, Liu, Y, Hew, L.C.
Deposit date:2007-09-17
Release date:2008-10-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR solution structure of ubiquitin like protein
To be Published
4JWN
DownloadVisualize
BU of 4jwn by Molmil
Ternary complex of D256A mutant of DNA Polymerase Beta
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Perera, L, Ping, L, Shock, D.D, Beard, W.A, Pedersen, L.C, Pedersen, L.G, Wilson, S.H.
Deposit date:2013-03-27
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Amino Acid Substitution in the Active Site of DNA Polymerase beta Explains the Energy Barrier of the Nucleotidyl Transfer Reaction.
J.Am.Chem.Soc., 135, 2013
2JW5
DownloadVisualize
BU of 2jw5 by Molmil
Polymerase Lambda BRCT domain
Descriptor: DNA polymerase lambda
Authors:Mueller, G.A, Moon, A.F, DeRose, E.F, Pedersen, L.C, London, R.E.
Deposit date:2007-10-05
Release date:2007-10-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Polymerase Lambda BRCT domain
To be Published
2K1R
DownloadVisualize
BU of 2k1r by Molmil
The solution NMR structure of the complex between MNK1 and HAH1 mediated by Cu(I)
Descriptor: COPPER (II) ION, Copper transport protein ATOX1, Copper-transporting ATPase 1
Authors:Bertini, I, Banci, L.C, Felli, I.C, Pavelkova, A, Rosato, A, Structural Proteomics in Europe (SPINE)
Deposit date:2008-03-14
Release date:2009-03-31
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The solution structure of the copper(I)-mediated complex between the first soluble domain of the Menkes protein and the metallochaperone HAH1.
To be Published
4M04
DownloadVisualize
BU of 4m04 by Molmil
Human DNA Polymerase Mu ternary complex
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
Deposit date:2013-08-01
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Sustained active site rigidity during synthesis by human DNA polymerase mu.
Nat.Struct.Mol.Biol., 21, 2014
2LZT
DownloadVisualize
BU of 2lzt by Molmil
REFINEMENT OF TRICLINIC LYSOZYME. II. THE METHOD OF STEREOCHEMICALLY RESTRAINED LEAST-SQUARES
Descriptor: HEN EGG WHITE LYSOZYME, NITRATE ION
Authors:Ramanadham, M, Sieker, L.C, Jensen, L.H.
Deposit date:1989-08-21
Release date:1990-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Refinement of triclinic lysozyme: II. The method of stereochemically restrained least squares.
Acta Crystallogr.,Sect.B, 46, 1990
3QRJ
DownloadVisualize
BU of 3qrj by Molmil
The crystal structure of human abl1 kinase domain T315I mutant in complex with DCC-2036
Descriptor: 4-[4-({[3-tert-butyl-1-(quinolin-6-yl)-1H-pyrazol-5-yl]carbamoyl}amino)-3-fluorophenoxy]-N-methylpyridine-2-carboxamide, Tyrosine-protein kinase ABL1
Authors:Chan, W.W, Wise, S.C, Kaufman, M.D, Ahn, Y.M, Ensinger, C.L, Haack, T, Hood, M.M, Jones, J, Lord, J.W, Lu, W.P, Miller, D, Patt, W.C, Smith, B.D, Petillo, P.A, Rutkoski, T.J, Telikepalli, H, Vogeti, L, Yao, T, Chun, L, Clark, R, Evangelista, P, Gavrilescu, L.C, Lazarides, K, Zaleskas, V.M, Stewart, L.J, Van Etten, R.A, Flynn, D.L.
Deposit date:2011-02-18
Release date:2011-06-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Conformational Control Inhibition of the BCR-ABL1 Tyrosine Kinase, Including the Gatekeeper T315I Mutant, by the Switch-Control Inhibitor DCC-2036.
Cancer Cell, 19, 2011
4JWM
DownloadVisualize
BU of 4jwm by Molmil
Ternary complex of D256E mutant of DNA Polymerase Beta
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Batra, V.K, Perera, L, Ping, L, Shock, D.D, Beard, W.A, Pedersen, L.C, Pedersen, L.G, Wilson, S.H.
Deposit date:2013-03-27
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Amino Acid Substitution in the Active Site of DNA Polymerase beta Explains the Energy Barrier of the Nucleotidyl Transfer Reaction.
J.Am.Chem.Soc., 135, 2013
4JVM
DownloadVisualize
BU of 4jvm by Molmil
Crystal structure of human estrogen sulfotransferase (SULT1E1) in complex with inactive cofactor PAP and brominated flame retardant TBBPA (tetrabromobisphenol A)
Descriptor: 1,2-ETHANEDIOL, 4,4'-propane-2,2-diylbis(2,6-dibromophenol), ADENOSINE-3'-5'-DIPHOSPHATE, ...
Authors:Gosavi, R.A, Knudsen, G.A, Birnbaum, L.S, Pedersen, L.C.
Deposit date:2013-03-25
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Mimicking of Estradiol Binding by Flame Retardants and Their Metabolites: A Crystallographic Analysis.
Environ.Health Perspect., 121, 2013

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon