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PDB: 21237 results

7MWC
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BU of 7mwc by Molmil
ERAP1 binds peptide C-terminus of a LPF sequence (AAAAFKARKF)
Descriptor: Endoplasmic reticulum aminopeptidase 1,LPF sequence
Authors:Guo, H.C, Sui, L.
Deposit date:2021-05-16
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:ERAP1 binds peptide C-termini of different sequences and/or lengths by a common recognition mechanism.
Immunobiology, 226, 2021
2G4C
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BU of 2g4c by Molmil
Crystal Structure of human DNA polymerase gamma accessory subunit
Descriptor: DNA polymerase gamma subunit 2
Authors:Fan, L, Farr, C.L, Kaguni, L.S, Tainer, J.A.
Deposit date:2006-02-22
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:A novel processive mechanism for DNA synthesis revealed by structure, modeling and mutagenesis of the accessory subunit of human mitochondrial DNA polymerase
J.Mol.Biol., 358, 2006
7MQX
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P. putida mandelate racemase forms an oxobenzoxaborole adduct with 2-formylphenylboronic acid
Descriptor: (3S)-2,1-benzoxaborole-1,3(3H)-diol, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Grandinetti, L, Bearne, S.L, St.Maurice, M.
Deposit date:2021-05-06
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.914 Å)
Cite:Slow-Onset, Potent Inhibition of Mandelate Racemase by 2-Formylphenylboronic Acid. An Unexpected Adduct Clasps the Catalytic Machinery.
Biochemistry, 2021
2G7R
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BU of 2g7r by Molmil
X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
Descriptor: Mucosa-associated lymphoid tissue lymphoma translocation protein 1
Authors:Walker, J.R, Wybenga-Groot, L, Newman, E.M, Finerty Jr, P.J, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C, Edwards, A, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2006-02-28
Release date:2006-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray structure of the death domain of the human mucosa associated lymphoid tissue lymphoma translocation protein 1
To be Published
7M2P
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BU of 7m2p by Molmil
Structure of the SARS-CoV-2 3CL protease in complex with inhibitor 18
Descriptor: 3C-like proteinase, Inhibitor 18 in bound form
Authors:Yang, K, Li, L.
Deposit date:2021-03-17
Release date:2021-08-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Self-Masked Aldehyde Inhibitors: A Novel Strategy for Inhibiting Cysteine Proteases.
J.Med.Chem., 64, 2021
7MDO
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BU of 7mdo by Molmil
Structure of human p97 ATPase L464P mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Zhang, X, Gui, L, Li, S, Nandi, P, Columbres, R.C, Wong, D.E, Moen, D.R, Lin, H.J, Chiu, P.-L, Chou, T.-F.
Deposit date:2021-04-05
Release date:2021-08-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.12 Å)
Cite:Conserved L464 in p97 D1-D2 linker is critical for p97 cofactor regulated ATPase activity.
Biochem.J., 478, 2021
7MDM
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Structure of human p97 ATPase L464P mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Zhang, X, Gui, L, Li, S, Nandi, P, Columbres, R.C, Wong, D.E, Moen, D.R, Lin, H.J, Chiu, P.-L, Chou, T.-F.
Deposit date:2021-04-05
Release date:2021-08-25
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.86 Å)
Cite:Conserved L464 in p97 D1-D2 linker is critical for p97 cofactor regulated ATPase activity.
Biochem.J., 478, 2021
7MQ7
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Tetragonal Maltose Binding Protein
Descriptor: CHLORIDE ION, Maltodextrin-binding protein, SULFATE ION, ...
Authors:Thaker, A, Sirajudeen, L, Simmons, C.R, Nannenga, B.L.
Deposit date:2021-05-05
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-guided identification of a peptide for bio-enabled gold nanoparticle synthesis.
Biotechnol.Bioeng., 118, 2021
7MQ6
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Tetragonal Maltose Binding Protein in the presence of gold
Descriptor: CHLORIDE ION, GOLD ION, Maltodextrin-binding protein, ...
Authors:Thaker, A, Sirajudeen, L, Simmons, C.R, Nannenga, B.L.
Deposit date:2021-05-05
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.372 Å)
Cite:Structure-guided identification of a peptide for bio-enabled gold nanoparticle synthesis.
Biotechnol.Bioeng., 118, 2021
2G9O
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BU of 2g9o by Molmil
Solution structure of the apo form of the third metal-binding domain of ATP7A protein (Menkes Disease protein)
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, DellaMalva, N, Rosato, A, Herrmann, T, Wuthrich, K, Structural Proteomics in Europe (SPINE)
Deposit date:2006-03-07
Release date:2006-08-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and intermolecular interactions of the third metal-binding domain of ATP7A, the Menkes disease protein.
J.Biol.Chem., 281, 2006
2FXL
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BU of 2fxl by Molmil
Urate oxidase from aspergillus flavus complexed with allantoin
Descriptor: 1-(2,5-DIOXO-2,5-DIHYDRO-1H-IMIDAZOL-4-YL)UREA, Uricase
Authors:Gabison, L, Chiadmi, M, Colloc'h, N, Prange, T.
Deposit date:2006-02-06
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Recapture of [S]-allantoin, the product of the two-step degradation of uric acid, by urate oxidase.
Febs Lett., 580, 2006
2FXY
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BU of 2fxy by Molmil
Solution structure of 55-72 segment of staphylococcal nuclease
Descriptor: 18-mer peptide from Thermonuclease
Authors:Wang, M, Shan, L, Wang, J.F.
Deposit date:2006-02-07
Release date:2006-12-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Two peptide fragments G55-I72 and K97-A109 from staphylococcal nuclease exhibit different behaviors in conformational preferences for helix formation
Biopolymers, 83, 2006
2GF4
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BU of 2gf4 by Molmil
Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14
Descriptor: ACETATE ION, CALCIUM ION, Protein Vng1086c
Authors:Benach, J, Zhou, W, Jayaraman, S, Forouhar, F.F, Janjua, H, Xiao, R, Ma, L.-C, Cunningham, K, Wang, D, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-03-21
Release date:2006-04-18
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of Vng1086c from Halobacterium salinarium (Halobacterium halobium). Northeast Structural Genomics Target HsR14
To be Published
2G2L
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BU of 2g2l by Molmil
Crystal Structure of the Second PDZ Domain of SAP97 in Complex with a GluR-A C-terminal Peptide
Descriptor: 18-mer peptide from glutamate receptor, ionotropic, AMPA1, ...
Authors:Von Ossowski, I, Oksanen, E, Von Ossowski, L, Cai, C, Sundberg, M, Goldman, A, Keinanen, K.
Deposit date:2006-02-16
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the second PDZ domain of SAP97 in complex with a GluR-A C-terminal peptide
Febs J., 273, 2006
7MPH
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BU of 7mph by Molmil
GRB2 SH2 Domain with Compound 7
Descriptor: (4-{(10R,11E,14S,18S)-18-(2-amino-2-oxoethyl)-14-[(naphthalen-1-yl)methyl]-8,17,20-trioxo-7,16,19-triazaspiro[5.14]icos-11-en-10-yl}phenyl)acetic acid, 1,2-ETHANEDIOL, Growth factor receptor-bound protein 2, ...
Authors:Sun, L, Schonbrunn, E.
Deposit date:2021-05-04
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Synthesis and structural characterization of a monocarboxylic inhibitor for GRB2 SH2 domain.
Bioorg.Med.Chem.Lett., 51, 2021
7MQJ
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BU of 7mqj by Molmil
Dhr1 Helicase Core
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Probable ATP-dependent RNA helicase DHR1
Authors:Miller, L, Chaker-Margot, M, Klinge, S.
Deposit date:2021-05-05
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Nucleolar maturation of the human small subunit processome.
Science, 373, 2021
2FZ4
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BU of 2fz4 by Molmil
Crystal Structure of the N-terminal half of Archaeoglobus Fulgidus XPB
Descriptor: DNA repair protein RAD25
Authors:Fan, L, Tainer, J.A.
Deposit date:2006-02-09
Release date:2006-04-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conserved XPB Core Structure and Motifs for DNA Unwinding: Implications for Pathway Selection of Transcription or Excision Repair.
Mol.Cell, 22, 2006
2G7M
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BU of 2g7m by Molmil
Crystal structure of B. fragilis N-succinylornithine transcarbamylase P90E mutant complexed with carbamoyl phosphate and N-acetylnorvaline
Descriptor: N-ACETYL-L-NORVALINE, PHOSPHORIC ACID MONO(FORMAMIDE)ESTER, SULFATE ION, ...
Authors:Shi, D, Yu, X, Roth, L, Morizono, H, Allewell, N.M, Tuchman, M.
Deposit date:2006-02-28
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A single mutation in the active site swaps the substrate specificity of N-acetyl-L-ornithine transcarbamylase and N-succinyl-L-ornithine transcarbamylase.
Protein Sci., 16, 2007
2GIA
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BU of 2gia by Molmil
Crystal structures of trypanosoma bruciei MRP1/MRP2
Descriptor: ACETIC ACID, mitochondrial RNA-binding protein 1, mitochondrial RNA-binding protein 2
Authors:Schumacher, M.A, Karamooz, E, Zikova, A, Trantirek, L, Lukes, J.
Deposit date:2006-03-28
Release date:2006-09-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism.
Cell(Cambridge,Mass.), 126, 2006
2G0U
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BU of 2g0u by Molmil
Solution Structure of Monomeric BsaL, the Type III Secretion Needle Protein of Burkholderia pseudomallei
Descriptor: type III secretion system needle protein
Authors:Zhang, L, Wang, Y, Picking, W.L, Picking, W.D, De Guzman, R.N.
Deposit date:2006-02-13
Release date:2006-05-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of Monomeric BsaL, the Type III Secretion Needle Protein of Burkholderia pseudomallei.
J.Mol.Biol., 359, 2006
2GID
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BU of 2gid by Molmil
Crystal structures of trypanosoma bruciei MRP1/MRP2
Descriptor: mitochondrial RNA-binding protein 1, mitochondrial RNA-binding protein 2
Authors:Schumacher, M.A, Karamooz, E, Zikova, A, Trantirek, L, Lukes, J.
Deposit date:2006-03-28
Release date:2006-09-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism.
Cell(Cambridge,Mass.), 126, 2006
2GAN
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BU of 2gan by Molmil
Crystal Structure of a Putative Acetyltransferase from Pyrococcus horikoshii, Northeast Structural Genomics Target JR32.
Descriptor: 1,2-ETHANEDIOL, 182aa long hypothetical protein, SULFATE ION
Authors:Forouhar, F, Abashidze, M, Jayaraman, S, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-03-09
Release date:2006-03-21
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Putative Acetyltransferase from Pyrococcus horikoshii, Northeast Structural Genomics Target JR32.
To be Published
2G3Q
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BU of 2g3q by Molmil
Solution Structure of Ede1 UBA-ubiquitin complex
Descriptor: Protein YBL047C, Ubiquitin
Authors:Swanson, K.A, Hicke, L, Radhakrishnan, I.
Deposit date:2006-02-20
Release date:2006-05-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Basis for Monoubiquitin Recognition by the Ede1 UBA Domain.
J.Mol.Biol., 358, 2006
3LJD
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BU of 3ljd by Molmil
The X-ray structure of zebrafish RNase1 from a new crystal form at pH 4.5
Descriptor: ACETATE ION, SULFATE ION, Zebrafish RNase1
Authors:Russo Krauss, I, Merlino, A, Mazzarella, L, Sica, F.
Deposit date:2010-01-26
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.
Biochem.J., 433, 2010
4UHG
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BU of 4uhg by Molmil
Crystal structure of human tankyrase 2 in complex with TA-21
Descriptor: 2-(4-METHYLPHENYL)-3,4-DIHYDROQUINAZOLIN-4-ONE, GLYCEROL, SULFATE ION, ...
Authors:Haikarainen, T, Lehtio, L.
Deposit date:2015-03-24
Release date:2016-04-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Activity Relationships of 2-Arylquinazolin-4-Ones as Highly Selective and Potent Inhibitors of the Tankyrases.
Eur.J.Med.Chem., 118, 2016

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