2BSG
 
 | | The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4 | | 分子名称: | FIBRITIN | | 著者 | Kostyuchenko, V.A, Chipman, P.R, Leiman, P.G, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2005-05-20 | | 公開日 | 2005-09-21 | | 最終更新日 | 2024-05-08 | | 実験手法 | ELECTRON MICROSCOPY (15 Å) | | 主引用文献 | The Tail Structure of Bacteriophage T4 and its Mechanism of Contraction.
Nat.Struct.Mol.Biol., 12, 2005
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1S2E
 | | BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9), THE TRIGGER OF TAIL CONTRACTION AND THE LONG TAIL FIBERS CONNECTOR, ALTERNATIVE FIT OF THE FIRST 19 RESIDUES | | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Baseplate structural protein Gp9 | | 著者 | Kostyuchenko, V.A, Navruzbekov, G.A, Kurochkina, L.P, Strelkov, S.V, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2004-01-08 | | 公開日 | 2004-01-13 | | 最終更新日 | 2024-02-14 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | The Structure of Bacteriophage T4 Gene Product 9: The Trigger for Tail Contraction
Structure Fold.Des., 7, 1999
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5IZ7
 | | Cryo-EM structure of thermally stable Zika virus strain H/PF/2013 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, structural protein E, structural protein M | | 著者 | Kostyuchenko, V.A, Zhang, S, Fibriansah, G, Lok, S.M. | | 登録日 | 2016-03-25 | | 公開日 | 2016-05-25 | | 最終更新日 | 2024-10-23 | | 実験手法 | ELECTRON MICROSCOPY (3.7 Å) | | 主引用文献 | Structure of the thermally stable Zika virus
Nature, 533, 2016
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1ZKU
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2YEW
 | | Modeling Barmah Forest virus structural proteins | | 分子名称: | CAPSID PROTEIN, E1 ENVELOPE GLYCOPROTEIN, E2 ENVELOPE GLYCOPROTEIN | | 著者 | Kostyuchenko, V.A, Jakana, J, Liu, X, Haddow, A.D, Aung, M, Weaver, S.C, Chiu, W, Lok, S.M. | | 登録日 | 2011-03-31 | | 公開日 | 2012-04-18 | | 最終更新日 | 2024-10-23 | | 実験手法 | ELECTRON MICROSCOPY (5 Å) | | 主引用文献 | The Structure of Barmah Forest Virus as Revealed by Cryo-Electron Microscopy at a 6-Angstrom Resolution Has Detailed Transmembrane Protein Architecture and Interactions.
J.Virol., 85, 2011
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1PDM
 | | Fitting of gp8 structure into the cryoEM reconstruction of the bacteriophage T4 baseplate | | 分子名称: | Baseplate structural protein Gp8 | | 著者 | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2003-05-19 | | 公開日 | 2003-09-09 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (12 Å) | | 主引用文献 | Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
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1PDL
 | | Fitting of gp5 in the cryoEM reconstruction of the bacteriophage T4 baseplate | | 分子名称: | Tail-associated lysozyme | | 著者 | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2003-05-19 | | 公開日 | 2003-09-09 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (12 Å) | | 主引用文献 | Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
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1PDF
 | | Fitting of gp11 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 baseplate-tail tube complex | | 分子名称: | Baseplate structural protein Gp11 | | 著者 | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2003-05-19 | | 公開日 | 2003-09-09 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (12 Å) | | 主引用文献 | Three-dimensional structure of bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
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4B03
 | | 6A Electron cryomicroscopy structure of immature Dengue virus serotype 1 | | 分子名称: | DENGUE VIRUS 1 E PROTEIN, DENGUE VIRUS 1 PRM PROTEIN | | 著者 | Kostyuchenko, V.A, Zhang, Q, Tan, L.C, Ng, T.S, Lok, S.M. | | 登録日 | 2012-06-28 | | 公開日 | 2013-06-05 | | 最終更新日 | 2024-05-08 | | 実験手法 | ELECTRON MICROSCOPY (6 Å) | | 主引用文献 | Immature and Mature Dengue Serotype 1 Virus Structures Provide Insight Into the Maturation Process.
J.Virol., 87, 2013
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1PDJ
 | | Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate | | 分子名称: | Baseplate structural protein Gp27 | | 著者 | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2003-05-19 | | 公開日 | 2003-09-09 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (12 Å) | | 主引用文献 | Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
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1PDP
 | | Fitting of gp9 structure into the bacteriophage T4 baseplate cryoEM reconstruction | | 分子名称: | Baseplate structural protein Gp9 | | 著者 | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2003-05-19 | | 公開日 | 2003-09-09 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (12 Å) | | 主引用文献 | Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
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4CBF
 | | Near-atomic resolution cryo-EM structure of Dengue serotype 4 virus | | 分子名称: | ENVELOPE PROTEIN E, M PROTEIN | | 著者 | Kostyuchenko, V.A, Chew, P.L, Ng, T.S, Lok, S.M. | | 登録日 | 2013-10-14 | | 公開日 | 2013-11-06 | | 最終更新日 | 2024-05-08 | | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | | 主引用文献 | Near-Atomic Resolution Cryo-Electron Microscopic Structure of Dengue Serotype 4 Virus.
J.Virol., 88, 2014
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4CCT
 | | Dengue 1 cryo-EM reconstruction | | 分子名称: | DENGUE VIRUS 1 E PROTEIN, DENGUE VIRUS 1 M PROTEIN | | 著者 | Kostyuchenko, V.A, Zhang, Q, Tan, J.L, Ng, T.S, Lok, S.M. | | 登録日 | 2013-10-28 | | 公開日 | 2013-11-06 | | 最終更新日 | 2024-05-08 | | 実験手法 | ELECTRON MICROSCOPY (4.5 Å) | | 主引用文献 | Immature and Mature Dengue Serotype 1 Virus Structures Provide Insight Into the Maturation Process.
J.Virol., 87, 2013
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1PDI
 | | Fitting of the C-terminal part of the short tail fibers into the cryo-EM reconstruction of T4 baseplate | | 分子名称: | Short tail fiber protein | | 著者 | Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2003-05-19 | | 公開日 | 2003-09-09 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (12 Å) | | 主引用文献 | Three-dimensional structure of bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
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1QEX
 | | BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9), THE TRIGGER OF TAIL CONTRACTION AND THE LONG TAIL FIBERS CONNECTOR | | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PROTEIN (BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9)) | | 著者 | Kostyuchenko, V.A, Navruzbekov, G.A, Kurochkina, L.P, Strelkov, S.V, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 1999-03-30 | | 公開日 | 1999-10-05 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | The structure of bacteriophage T4 gene product 9: the trigger for tail contraction.
Structure Fold.Des., 7, 1999
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5A1Z
 | | Cryo-EM structure of Dengue virus serotype 2 strain PVP94-07 complexed with human antibody 2D22 Fab at 37 degrees C | | 分子名称: | ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 - HEAVY CHAIN, ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 - LIGHT CHAIN, ENVELOPE PROTEIN, ... | | 著者 | Fibriansah, G, Ibarra, K.D, Ng, T.S, Smith, S.A, Tan, J.L, Lim, X.N, Ooi, J.S.G, Kostyuchenko, V.A, Wang, J, de Silva, A.M, Harris, E, Crowe Jr, J.E, Lok, S.M. | | 登録日 | 2015-05-06 | | 公開日 | 2015-07-15 | | 最終更新日 | 2024-05-08 | | 実験手法 | ELECTRON MICROSCOPY (6.9 Å) | | 主引用文献 | Cryo-EM structure of an antibody that neutralizes dengue virus type 2 by locking E protein dimers.
Science, 349, 2015
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1TJA
 | | Fitting of gp8, gp9, and gp11 into the cryo-EM reconstruction of the bacteriophage T4 contracted tail | | 分子名称: | Baseplate structural protein Gp11, Baseplate structural protein Gp8, Baseplate structural protein Gp9 | | 著者 | Leiman, P.G, Chipman, P.R, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2004-06-03 | | 公開日 | 2004-08-31 | | 最終更新日 | 2024-02-14 | | 実験手法 | ELECTRON MICROSCOPY (16 Å) | | 主引用文献 | Three-dimensional rearrangement of proteins in the tail of bacteriophage t4 on infection of its host
Cell(Cambridge,Mass.), 118, 2004
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3C6R
 | | Low pH Immature Dengue Virus | | 分子名称: | Envelope protein, Peptide pr | | 著者 | Yu, I, Zhang, W, Holdway, H.A, Li, L, Kostyuchenko, V.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J. | | 登録日 | 2008-02-05 | | 公開日 | 2008-04-22 | | 最終更新日 | 2024-02-21 | | 実験手法 | ELECTRON MICROSCOPY (25 Å) | | 主引用文献 | Structure of the immature dengue virus at low pH primes proteolytic maturation
Science, 319, 2008
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1EL6
 | | STRUCTURE OF BACTERIOPHAGE T4 GENE PRODUCT 11, THE INTERFACE BETWEEN THE BASEPLATE AND SHORT TAIL FIBERS | | 分子名称: | BASEPLATE STRUCTURAL PROTEIN GP11 | | 著者 | Leiman, P.G, Kostyuchenko, V.A, Schneider, M.M, Kurochkina, L.P, Mesyanzhinov, V.V, Rossmann, M.G. | | 登録日 | 2000-03-13 | | 公開日 | 2000-04-05 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Structure of bacteriophage T4 gene product 11, the interface between the baseplate and short tail fibers.
J.Mol.Biol., 301, 2000
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4UIF
 | | Cryo-EM structure of Dengue virus serotype 2 in complex with antigen-binding fragments of human antibody 2D22 | | 分子名称: | ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 - HEAVY CHAIN, ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 - LIGHT CHAIN, DENGUE VIRUS SEROTYPE 2 STRAIN PVP94 07 - ENVELOPE PROTEIN, ... | | 著者 | Fibriansah, G, Ibarra, K.D, Ng, T.-S, Smith, S.A, Tan, J.L, Lim, X.-N, Ooi, J.S.G, Kostyuchenko, V.A, Wang, J, de Silva, A.M, Harris, E, Crowe Junior, J.E, Lok, S.-M. | | 登録日 | 2015-03-30 | | 公開日 | 2015-07-15 | | 最終更新日 | 2024-05-08 | | 実験手法 | ELECTRON MICROSCOPY (6.5 Å) | | 主引用文献 | Cryo-EM structure of an antibody that neutralizes dengue virus type 2 by locking E protein dimers.
Science, 349, 2015
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4UIH
 | | Cryo-EM structure of Dengue virus serotype 2 strain New Guinea-C complexed with human antibody 2D22 Fab at 37 degree C. The Fab molecules were added to the virus before 37 degree C incubation. | | 分子名称: | ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 -HEAVY CHAIN, ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 -LIGHT CHAIN, DENGUE VIRUS SEROTYPE 2 STRAIN NEW GUINEA-C E PROTEIN ECTODOMAIN | | 著者 | Fibriansah, G, Ibarra, K.D, Ng, T.-S, Smith, S.A, Tan, J.L, Lim, X.N, Ooi, J.S.G, Kostyuchenko, V.A, Wang, J, de Silva, A.M, Harris, E, Crowe, J.E, Lok, S.-M. | | 登録日 | 2015-03-30 | | 公開日 | 2015-07-15 | | 最終更新日 | 2024-05-08 | | 実験手法 | ELECTRON MICROSCOPY (20 Å) | | 主引用文献 | Cryo-EM structure of an antibody that neutralizes dengue virus type 2 by locking E protein dimers.
Science, 349, 2015
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6LNU
 | | Cryo-EM structure of immature Zika virus | | 分子名称: | Genome polyprotein | | 著者 | Tan, T.Y, Fibriansah, G, Kostyuchenko, V.A, Ng, T.S, Lim, X.X, Lim, X.N, Shi, J, Morais, M.C, Corti, D, Lok, S.M. | | 登録日 | 2020-01-02 | | 公開日 | 2020-02-26 | | 最終更新日 | 2024-03-27 | | 実験手法 | ELECTRON MICROSCOPY (9 Å) | | 主引用文献 | Capsid protein structure in Zika virus reveals the flavivirus assembly process.
Nat Commun, 11, 2020
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6LNT
 | | Cryo-EM structure of immature Zika virus in complex with human antibody DV62.5 Fab | | 分子名称: | Envelope protein, Fab DV62.5 heavy-chain variable region, Fab DV62.5 light-chain variable region, ... | | 著者 | Tan, T.Y, Fibriansah, G, Kostyuchenko, V.A, Ng, T.S, Lim, X.X, Lim, X.N, Shi, J, Morais, M.C, Corti, D, Lok, S.M. | | 登録日 | 2020-01-02 | | 公開日 | 2020-02-26 | | 最終更新日 | 2024-03-27 | | 実験手法 | ELECTRON MICROSCOPY (8 Å) | | 主引用文献 | Capsid protein structure in Zika virus reveals the flavivirus assembly process.
Nat Commun, 11, 2020
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6IDI
 | | Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0. | | 分子名称: | Envelope protein, Fab 1H10 heavy chain (V-region), Fab 1H10 light chain (V-region), ... | | 著者 | Wirawan, M, Fibriansah, G, Ng, T.S, Zhang, Q, Kostyuchenko, V.A, Shi, J, Lok, S.M. | | 登録日 | 2018-09-10 | | 公開日 | 2018-12-12 | | 最終更新日 | 2024-03-27 | | 実験手法 | ELECTRON MICROSCOPY (12 Å) | | 主引用文献 | Mechanism of Enhanced Immature Dengue Virus Attachment to Endosomal Membrane Induced by prM Antibody.
Structure, 27, 2019
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6IDK
 | | Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle) | | 分子名称: | Envelope protein, Fab 1H10 heavy chain (V-region), Fab 1H10 light chain (V-region), ... | | 著者 | Wirawan, M, Fibriansah, G, Ng, T.S, Zhang, Q, Kostyuchenko, V.A, Shi, J, Lok, S.M. | | 登録日 | 2018-09-10 | | 公開日 | 2018-12-12 | | 最終更新日 | 2024-03-27 | | 実験手法 | ELECTRON MICROSCOPY (25 Å) | | 主引用文献 | Mechanism of Enhanced Immature Dengue Virus Attachment to Endosomal Membrane Induced by prM Antibody.
Structure, 27, 2019
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