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PDB: 62 results

6TH7
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BU of 6th7 by Molmil
Structure of porcine pancreatic elastase in complex with tutuilamide
Descriptor: CALCIUM ION, Chymotrypsin-like elastase family member 1, Tutuilamide
Authors:Koehnke, J, Sikandar, A.
Deposit date:2019-11-18
Release date:2020-03-04
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Tutuilamides A-C: Vinyl-Chloride-Containing Cyclodepsipeptides from Marine Cyanobacteria with Potent Elastase Inhibitory Properties.
Acs Chem.Biol., 15, 2020
5O22
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BU of 5o22 by Molmil
E. coli FolD in complex with carolacton
Descriptor: Bifunctional protein FolD, Carolacton
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-05-19
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The natural product carolacton inhibits folate-dependent C1 metabolism by targeting FolD/MTHFD.
Nat Commun, 8, 2017
6T6X
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BU of 6t6x by Molmil
Structure of the Bottromycin epimerase BotH in complex with substrate
Descriptor: (4~{R})-2-[(1~{R})-1-[[(2~{S})-2-[[(2~{S})-3-methyl-2-[[(4~{Z},6~{S},9~{S},12~{S})-2,8,11-tris(oxidanylidene)-6,9-di(propan-2-yl)-1,4,7,10-tetrazabicyclo[10.3.0]pentadec-4-en-5-yl]amino]butanoyl]amino]-3-phenyl-propanoyl]amino]-3-oxidanyl-3-oxidanylidene-propyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid, BotH
Authors:Koehnke, J, Sikandar, A.
Deposit date:2019-10-20
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes.
Nat.Chem.Biol., 16, 2020
5O2A
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BU of 5o2a by Molmil
FolD Q98H
Descriptor: Bifunctional protein FolD
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-05-19
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The natural product carolacton inhibits folate-dependent C1 metabolism by targeting FolD/MTHFD.
Nat Commun, 8, 2017
6T6H
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BU of 6t6h by Molmil
Apo structure of the Bottromycin epimerase BotH
Descriptor: BotH, SODIUM ION, SULFATE ION
Authors:Koehnke, J, Sikandar, A.
Deposit date:2019-10-18
Release date:2020-07-15
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes.
Nat.Chem.Biol., 16, 2020
6T6Z
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BU of 6t6z by Molmil
Structure of the Bottromycin epimerase BotH in complex with a bottromycin A2 derivative
Descriptor: BotH, Bottromycin A2 derivative
Authors:Koehnke, J, Sikandar, A.
Deposit date:2019-10-20
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes.
Nat.Chem.Biol., 16, 2020
5O28
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BU of 5o28 by Molmil
E. coli FolD apo
Descriptor: Bifunctional protein FolD
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-05-19
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The natural product carolacton inhibits folate-dependent C1 metabolism by targeting FolD/MTHFD.
Nat Commun, 8, 2017
5ODU
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BU of 5odu by Molmil
PllA lectin, monosaccharide complex
Descriptor: CALCIUM ION, PllA, methyl alpha-D-galactopyranoside
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-07-06
Release date:2017-10-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Photorhabdus luminescens lectin A (PllA): A new probe for detecting alpha-galactoside-terminating glycoconjugates.
J. Biol. Chem., 292, 2017
6T6Y
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BU of 6t6y by Molmil
Structure of the Bottromycin epimerase BotH in complex with Bottromycin A2
Descriptor: BotH, Bottromycin A2
Authors:Koehnke, J, Sikandar, A.
Deposit date:2019-10-20
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes.
Nat.Chem.Biol., 16, 2020
5OFI
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BU of 5ofi by Molmil
PllA lectin, Fluorophore carbohydrate complex
Descriptor: 5-[2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyethylcarbamothioylamino]-2-(6-oxidanyl-3-oxidanylidene-4,9-dihydroxanthen-9-yl)benzoic acid, CALCIUM ION, PIIA
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-07-11
Release date:2017-10-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Photorhabdus luminescens lectin A (PllA): A new probe for detecting alpha-galactoside-terminating glycoconjugates.
J. Biol. Chem., 292, 2017
6T70
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BU of 6t70 by Molmil
Structure of the Bottromycin epimerase BotH in complex with Bottromycin A2 derivative
Descriptor: BotH, Bottromycin A2 derivative, CHLORIDE ION, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2019-10-20
Release date:2020-07-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes.
Nat.Chem.Biol., 16, 2020
4BS9
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BU of 4bs9 by Molmil
Structure of the heterocyclase TruD
Descriptor: TRUD, ZINC ION
Authors:Koehnke, J, Bent, A.F, Zollman, D, Smith, K, Houssen, W.E, Zhu, X, Mann, G, Lebl, T, Scharff, R, Shirran, S, Botting, C.H, Jaspars, M, Schwarz-Linek, U, Naismith, J.H.
Deposit date:2013-06-09
Release date:2013-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Cyanobactin Heterocyclase Enzyme: A Processive Adenylase that Operates with a Defined Order of Reaction.
Angew.Chem.Int.Ed.Engl., 52, 2013
4AKT
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BU of 4akt by Molmil
PatG macrocyclase in complex with peptide
Descriptor: SUBSTRATE ANALOGUE, THIAZOLINE OXIDASE/SUBTILISIN-LIKE PROTEASE
Authors:Koehnke, J, Bent, A, Houssen, W.E, Zollman, D, Morawitz, F, Shirran, S, Vendome, J, Nneoyiegbe, A.F, Trembleau, L, Botting, C.H, Smith, M.C.M, Jaspars, M, Naismith, J.H.
Deposit date:2012-02-28
Release date:2012-07-18
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:The Mechanism of Patellamide Macrocyclization Revealed by the Characterization of the Patg Macrocyclase Domain.
Nat.Struct.Mol.Biol., 19, 2012
4AKS
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BU of 4aks by Molmil
PatG macrocyclase domain
Descriptor: THIAZOLINE OXIDASE/SUBTILISIN-LIKE PROTEASE
Authors:Koehnke, J, Bent, A, Houssen, W.E, Zollman, D, Morawitz, F, Shirran, S, Vendome, J, Nneoyiegbe, A.F, Trembleau, L, Botting, C.H, Smith, M.C.M, Jaspars, M, Naismith, J.H.
Deposit date:2012-02-28
Release date:2012-07-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The Mechanism of Patellamide Macrocyclization Revealed by the Characterization of the Patg Macrocyclase Domain.
Nat.Struct.Mol.Biol., 19, 2012
7OC7
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BU of 7oc7 by Molmil
LasB, alpha-alkyl-N-aryl mercaptoacetamide
Descriptor: (2R)-N,3-diphenyl-2-sulfanyl-propanamide, CALCIUM ION, Neutral metalloproteinase, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2021-04-26
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Substrate-Inspired Fragment Merging and Growing Affords Efficacious LasB Inhibitors.
Angew.Chem.Int.Ed.Engl., 61, 2022
6F8B
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BU of 6f8b by Molmil
LasB bound to thiol based inhibitor
Descriptor: CALCIUM ION, Elastase, ZINC ION, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-12-12
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Binding Mode Characterization and Early in Vivo Evaluation of Fragment-Like Thiols as Inhibitors of the Virulence Factor LasB from Pseudomonas aeruginosa.
ACS Infect Dis, 4, 2018
6FZX
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BU of 6fzx by Molmil
LasB, hydroxymate Inhibitor Complex
Descriptor: CALCIUM ION, GLYCEROL, Keratinase KP2, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2018-03-15
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Tackling Pseudomonas aeruginosa Virulence by a Hydroxamic Acid-Based LasB Inhibitor.
ACS Chem. Biol., 13, 2018
4UVQ
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BU of 4uvq by Molmil
PatG Domain of Unknown Function
Descriptor: THIAZOLINE OXIDASE/SUBTILISIN-LIKE PROTEASE, ZINC ION
Authors:Mann, G, Koehnke, J, Bent, A.F, Graham, R, Schwarz-Linek, U, Naismith, J.H.
Deposit date:2014-08-07
Release date:2014-09-17
Last modified:2014-12-17
Method:X-RAY DIFFRACTION (1.724 Å)
Cite:The Structure of the Cyanobactin Domain of Unknown Function from Patg in the Patellamide Gene Cluster
Acta Crystallogr.,Sect.F, 70, 2014
7ABB
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BU of 7abb by Molmil
The truncated structure of the Bottromycin biosynthetic protein SalCYP
Descriptor: HEME C, SalCYP truncation
Authors:Adam, S, Koehnke, J.
Deposit date:2020-09-07
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.50004339 Å)
Cite:Characterization of the Stereoselective P450 Enzyme BotCYP Enables the In Vitro Biosynthesis of the Bottromycin Core Scaffold.
J.Am.Chem.Soc., 142, 2020
8R1B
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BU of 8r1b by Molmil
Crystal structure of recombinant LasB from Pseudomonas aeruginosa PAO1 in complex with 6466
Descriptor: CALCIUM ION, GLYCEROL, Pro-elastase, ...
Authors:Kolling, D, Koehnke, J.
Deposit date:2023-11-01
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Dipeptidic Phosphonates: Potent Inhibitors of Pseudomonas aeruginosa Elastase B Showing Efficacy in a Murine Keratitis Model
Chemrxiv, 2024
8OII
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BU of 8oii by Molmil
Cryo-EM KSB domain of RhiE from Burkholderia rhizoxinica
Descriptor: RhiE protein,Polyketide synthase domain protein RhiE
Authors:Capper, M.J, Koehnke, J.
Deposit date:2023-03-22
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structural Analysis of a Chain-Branching Polyketide Synthase Module
To Be Published
7PD7
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BU of 7pd7 by Molmil
Crocagin methyl transferase CgnL
Descriptor: GLYCEROL, Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Zheng, D, Koehnke, J.
Deposit date:2021-08-04
Release date:2022-08-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis.
Nat.Chem., 15, 2023
8A2N
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BU of 8a2n by Molmil
Structure of crocagin biosynthetic protein CgnD
Descriptor: CgnD, SULFATE ION
Authors:Adam, S, Koehnke, J.
Deposit date:2022-06-06
Release date:2023-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Unusual peptide-binding proteins guide pyrroloindoline alkaloid formation in crocagin biosynthesis.
Nat.Chem., 15, 2023
8AHD
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BU of 8ahd by Molmil
The apo structure of the Corramycin phosphotransferase
Descriptor: Corramycin phosphotransferase, GLYCEROL
Authors:Adam, S, Mueller, R, Koehnke, J.
Deposit date:2022-07-21
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The apo structure of the Corramycin phosphotransferase
To Be Published
8CR7
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BU of 8cr7 by Molmil
Crystal structure of recombinant LasB from Pseudomonas aeruginosa PA7
Descriptor: CALCIUM ION, Pro-elastase, ZINC ION
Authors:Kolling, D, Koehnke, J.
Deposit date:2023-03-07
Release date:2023-07-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Facile Production of the Pseudomonas aeruginosa Virulence Factor LasB in Escherichia coli for Structure-Based Drug Design.
Chembiochem, 24, 2023

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