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PDB: 93 件

5UHO
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Crystal structure of the core catalytic domain of human O-GlcNAcase complexed with PUGNAc
分子名称: O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE, O-GlcNAcase TIM-barrel domain, O-GlcNAcase stalk domain
著者Klein, D.J, Elsen, N.L.
登録日2017-01-11
公開日2017-03-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Crystal structure of the core catalytic domain of human O-GlcNAcase and molecular basis of activity and inhibition
To Be Published
5UHL
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Crystal structure of the core catalytic domain of human O-GlcNAcase complexed with Thiamet G
分子名称: (2Z,3aR,5R,6S,7R,7aR)-2-(ethylimino)-5-(hydroxymethyl)hexahydro-3aH-pyrano[3,2-d][1,3]thiazole-6,7-diol, O-GlcNAcase TIM-barrel domain, O-GlcNAcase stalk domain
著者Klein, D.J, Elsen, N.L.
登録日2017-01-11
公開日2017-03-29
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.14 Å)
主引用文献Crystal structure of the core catalytic domain of human O-GlcNAcase and molecular basis of activity and inhibition
To Be Published
2HO7
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BU of 2ho7 by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-07-13
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2H0Z
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BU of 2h0z by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
3CA7
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BU of 3ca7 by Molmil
High Resolution Crystal Structure of the EGF domain of Spitz
分子名称: Protein spitz
著者Klein, D.E, Stayrook, S.E, Lemmon, M.A.
登録日2008-02-19
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for EGFR ligand sequestration by Argos.
Nature, 453, 2008
4GSX
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BU of 4gsx by Molmil
High resolution structure of dengue virus serotype 1 sE containing stem
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, CHLORIDE ION, ...
著者Klein, D.E, Choi, J.L, Harrison, S.C.
登録日2012-08-28
公開日2012-12-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Structure of a dengue virus envelope protein late-stage fusion intermediate.
J.Virol., 87, 2013
2GCS
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BU of 2gcs by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme amino RNA inhibitor
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-03-14
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2GCV
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BU of 2gcv by Molmil
Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-03-14
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2H0X
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BU of 2h0x by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme amino RNA inhibitor
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2H0S
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BU of 2h0s by Molmil
Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: MAGNESIUM ION, glmS ribozyme RNA, glmS ribozyme deoxy RNA inhibitor
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
4GT0
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BU of 4gt0 by Molmil
Structure of dengue virus serotype 1 sE containing stem to residue 421
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, CHLORIDE ION, ...
著者Klein, D.E, Choi, J.L, Harrison, S.C.
登録日2012-08-28
公開日2012-12-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structure of a dengue virus envelope protein late-stage fusion intermediate.
J.Virol., 87, 2013
2H0W
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BU of 2h0w by Molmil
Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-05-15
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
2HO6
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BU of 2ho6 by Molmil
Post-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, glmS ribozyme RNA, ...
著者Klein, D.J, Ferre-D'Amare, A.R.
登録日2006-07-13
公開日2006-09-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of glmS ribozyme activation by glucosamine-6-phosphate
Science, 313, 2006
7LTG
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BU of 7ltg by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH APICIDIN
分子名称: (3S,6S,9S,15aR)-9-[(2S)-butan-2-yl]-3-(6,6-dihydroxyoctyl)-6-[(1-methoxy-1H-indol-3-yl)methyl]octahydro-2H-pyrido[1,2-a][1,4,7,10]tetraazacyclododecine-1,4,7,10(3H,12H)-tetrone, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Beshore, D.C.
登録日2021-02-19
公開日2021-05-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Redefining the Histone Deacetylase Inhibitor Pharmacophore: High Potency with No Zinc Cofactor Interaction.
Acs Med.Chem.Lett., 12, 2021
7LTK
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BU of 7ltk by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN INHIBITOR THAT LACKS A ZINC BINDING GROUP (COMPOUND 12)
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Beshore, D.C.
登録日2021-02-19
公開日2021-05-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Redefining the Histone Deacetylase Inhibitor Pharmacophore: High Potency with No Zinc Cofactor Interaction.
Acs Med.Chem.Lett., 12, 2021
7LTL
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BU of 7ltl by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN INHIBITOR LACKING A ZINC BINDING GROUP (COMPOUND 19)
分子名称: (2R)-2-(5-hydroxy-2-methyl-1H-indol-3-yl)-N-{(1S)-1-[5-(2-methoxyquinolin-3-yl)-1H-imidazol-2-yl]pentyl}propanamide, ACETATE ION, CALCIUM ION, ...
著者Klein, D.J, Beshore, D.C.
登録日2021-02-19
公開日2021-05-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Redefining the Histone Deacetylase Inhibitor Pharmacophore: High Potency with No Zinc Cofactor Interaction.
Acs Med.Chem.Lett., 12, 2021
1DSV
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BU of 1dsv by Molmil
STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (C-TERMINAL ZINC FINGER)
分子名称: NUCLEIC ACID BINDING PROTEIN P14, ZINC ION
著者Klein, D.J, Johnson, P.E, Zollars, E.S, De Guzman, R.N, Summers, M.F.
登録日2000-01-08
公開日2000-01-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The NMR structure of the nucleocapsid protein from the mouse mammary tumor virus reveals unusual folding of the C-terminal zinc knuckle.
Biochemistry, 39, 2000
1DSQ
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BU of 1dsq by Molmil
STRUCTURE OF THE MMTV NUCLEOCAPSID PROTEIN (ZINC FINGER 1)
分子名称: NUCLEIC ACID BINDING PROTEIN P14, ZINC ION
著者Klein, D.J, Johnson, P.E, Zollars, E.S, De Guzman, R.N, Summers, M.F.
登録日2000-01-08
公開日2000-01-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The NMR structure of the nucleocapsid protein from the mouse mammary tumor virus reveals unusual folding of the C-terminal zinc knuckle.
Biochemistry, 39, 2000
3FU2
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BU of 3fu2 by Molmil
Cocrystal structure of a class-I preQ1 riboswitch
分子名称: 7-DEAZA-7-AMINOMETHYL-GUANINE, CALCIUM ION, PreQ1 riboswitch
著者Klein, D.J, Edwards, T.E, Ferre-D'Amare, A.R.
登録日2009-01-13
公開日2009-03-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Cocrystal structure of a class I preQ1 riboswitch reveals a pseudoknot recognizing an essential hypermodified nucleobase
Nat.Struct.Mol.Biol., 16, 2009
7KBH
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BU of 7kbh by Molmil
Structure of Human HDAC2 in complex with a 2-substituted benzamide inhibitor (compound 16)
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Histone deacetylase 2, ...
著者Klein, D.J, Liu, J.
登録日2020-10-02
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Discovery of Highly Selective and Potent HDAC3 Inhibitors Based on a 2-Substituted Benzamide Zinc Binding Group.
Acs Med.Chem.Lett., 11, 2020
7KBG
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BU of 7kbg by Molmil
Structure of Human HDAC2 in complex with a 2-substituted benzamide inhibitor (compound 20)
分子名称: 2,5-dichloro-1H-benzimidazole, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Liu, J.
登録日2020-10-02
公開日2020-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Discovery of Highly Selective and Potent HDAC3 Inhibitors Based on a 2-Substituted Benzamide Zinc Binding Group.
Acs Med.Chem.Lett., 11, 2020
3CGU
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BU of 3cgu by Molmil
Crystal Structure of unliganded Argos
分子名称: Protein giant-lens
著者Klein, D.E, Stayrook, S.E, Lemmon, M.A.
登録日2008-03-06
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structural basis for EGFR ligand sequestration by Argos.
Nature, 453, 2008
7JS8
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BU of 7js8 by Molmil
STRUCTURE OF HUMAN HDAC2 IN COMPLEX WITH AN ETHYL KETONE INHIBITOR CONTAINING A SPIRO-BICYCLIC GROUP (COMPOUND 22)
分子名称: (1S)-N-{(1S)-7,7-dihydroxy-1-[4-(2-methylquinolin-6-yl)-1H-imidazol-2-yl]nonyl}-6-methyl-6-azaspiro[2.5]octane-1-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2020-08-14
公開日2021-08-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.634 Å)
主引用文献Discovery of Ethyl Ketone-Based Highly Selective HDACs 1, 2, 3 Inhibitors for HIV Latency Reactivation with Minimum Cellular Potency Serum Shift and Reduced hERG Activity.
J.Med.Chem., 64, 2021
7MOY
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BU of 7moy by Molmil
Structure of HDAC2 in complex with an inhibitor (compound 19)
分子名称: (1S)-6-ethyl-N-{(1S)-1-[5-(2-ethyl-1-oxo-1,2-dihydroisoquinolin-6-yl)-1H-imidazol-2-yl]-7,7-dihydroxynonyl}-6-azaspiro[2.5]octane-1-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2021-05-03
公開日2021-07-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Discovery of macrocyclic HDACs 1, 2, and 3 selective inhibitors for HIV latency reactivation.
Bioorg.Med.Chem.Lett., 47, 2021
7MOT
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Structure of HDAC2 in complex with an inhibitor (compound 9)
分子名称: 5-{(1S)-7,7-dihydroxy-1-[(1-methylazetidine-3-carbonyl)amino]nonyl}-2-phenyl-1H-imidazole-4-carboxamide, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Klein, D.J, Yu, W.
登録日2021-05-03
公開日2021-07-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Discovery of macrocyclic HDACs 1, 2, and 3 selective inhibitors for HIV latency reactivation.
Bioorg.Med.Chem.Lett., 47, 2021

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件を2024-09-04に公開中

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