Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 188 results

2XB5
DownloadVisualize
BU of 2xb5 by Molmil
Tet repressor (class D) in complex with 7-Iodotetracycline
Descriptor: 7-IODOTETRACYCLINE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Kisker, C, Saenger, W, Hinrichs, W.
Deposit date:2010-04-05
Release date:2010-10-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Tet repressor-tetracycline complex and regulation of antibiotic resistance.
Science, 264, 1994
1SOX
DownloadVisualize
BU of 1sox by Molmil
SULFITE OXIDASE FROM CHICKEN LIVER
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, MOLYBDENUM ATOM, ...
Authors:Kisker, C, Schindelin, H, Rees, D.C.
Deposit date:1997-12-31
Release date:1998-04-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis of sulfite oxidase deficiency from the structure of sulfite oxidase.
Cell(Cambridge,Mass.), 91, 1997
1THJ
DownloadVisualize
BU of 1thj by Molmil
CARBONIC ANHYDRASE FROM METHANOSARCINA
Descriptor: CARBONIC ANHYDRASE, ZINC ION
Authors:Kisker, C, Schindelin, H, Rees, D.C.
Deposit date:1996-04-02
Release date:1996-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A left-hand beta-helix revealed by the crystal structure of a carbonic anhydrase from the archaeon Methanosarcina thermophila.
EMBO J., 15, 1996
5G2O
DownloadVisualize
BU of 5g2o by Molmil
Yersinia pestis FabV variant T276A
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, DIMETHYL SULFOXIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Pschibul, A, Kuper, J, HIrschbeck, M, Kisker, C.
Deposit date:2016-04-11
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selectivity of Pyridone- and Diphenyl Ether-Based Inhibitors for the Yersinia Pestis Fabv Enoyl-Acp Reductase.
Biochemistry, 55, 2016
4V98
DownloadVisualize
BU of 4v98 by Molmil
The 8S snRNP Assembly Intermediate
Descriptor: CG10419, Icln, LD23602p, ...
Authors:Grimm, C, Pelz, J.P, Schindelin, H, Diederichs, K, Kuper, J, Kisker, C.
Deposit date:2012-05-15
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis of Assembly Chaperone- Mediated snRNP Formation.
Mol.Cell, 49, 2013
8REV
DownloadVisualize
BU of 8rev by Molmil
Structure of XPD stalled at a Y-fork DNA containing a interstrand crosslink
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase CHL1, DNA (46-MER), ...
Authors:Kuper, J, Hove, T, Kisker, C.
Deposit date:2023-12-12
Release date:2024-05-29
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:XPD stalled on cross-linked DNA provides insight into damage verification.
Nat.Struct.Mol.Biol., 31, 2024
7AD8
DownloadVisualize
BU of 7ad8 by Molmil
Core TFIIH-XPA-DNA complex with modelled p62 subunit
Descriptor: DNA (49-MER), DNA repair protein complementing XP-A cells, General transcription and DNA repair factor IIH helicase subunit XPB, ...
Authors:Koelmel, W, Kuper, J, Kisker, C.
Deposit date:2020-09-14
Release date:2021-07-28
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The TFIIH subunits p44/p62 act as a damage sensor during nucleotide excision repair.
Nucleic Acids Res., 48, 2020
8P1P
DownloadVisualize
BU of 8p1p by Molmil
USP28 in complex with AZ1
Descriptor: 2-[[5-bromanyl-2-[[4-fluoranyl-3-(trifluoromethyl)phenyl]methoxy]phenyl]methylamino]ethanol, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Sauer, F, Karal-Nair, R, Kisker, C.
Deposit date:2023-05-12
Release date:2024-05-22
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structural basis for the bi-specificity of USP25 and USP28 inhibitors.
Embo Rep., 25, 2024
1QRE
DownloadVisualize
BU of 1qre by Molmil
A CLOSER LOOK AT THE ACTIVE SITE OF GAMMA-CARBONIC ANHYDRASES: HIGH RESOLUTION CRYSTALLOGRAPHIC STUDIES OF THE CARBONIC ANHYDRASE FROM METHANOSARCINA THERMOPHILA
Descriptor: BICARBONATE ION, CARBONIC ANHYDRASE, COBALT (II) ION
Authors:Iverson, T.M, Alber, B.E, Kisker, C, Ferry, J.G, Rees, D.C.
Deposit date:1999-06-13
Release date:1999-06-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila.
Biochemistry, 39, 2000
1QRL
DownloadVisualize
BU of 1qrl by Molmil
A CLOSER LOOK AT THE ACTIVE SITE OF GAMMA-CARBONIC ANHYDRASES: HIGH RESOLUTION CRYSTALLOGRAPHIC STUDIES OF THE CARBONIC ANHYDRASE FROM METHANOSARCINA THERMOPHILA
Descriptor: BICARBONATE ION, CARBONIC ANHYDRASE, ZINC ION
Authors:Iverson, T.M, Alber, B.E, Kisker, C, Ferry, J.G, Rees, D.C.
Deposit date:1999-06-15
Release date:1999-06-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila.
Biochemistry, 39, 2000
1Q51
DownloadVisualize
BU of 1q51 by Molmil
Crystal Structure of Mycobacterium tuberculosis MenB in Complex with Acetoacetyl-Coenzyme A, a Key Enzyme in Vitamin K2 Biosynthesis
Descriptor: ACETOACETYL-COENZYME A, menB
Authors:Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-08-05
Release date:2004-01-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003
1Q52
DownloadVisualize
BU of 1q52 by Molmil
Crystal Structure of Mycobacterium tuberculosis MenB, a Key Enzyme in Vitamin K2 Biosynthesis
Descriptor: menB
Authors:Truglio, J.J, Theis, K, Feng, Y, Gajda, R, Machutta, C, Tonge, P.J, Kisker, C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-08-05
Release date:2004-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.
J.Biol.Chem., 278, 2003
8P1Q
DownloadVisualize
BU of 8p1q by Molmil
USP28 in complex with FT206
Descriptor: 3-azanyl-N-[(2S)-6-[(1S,5R)-3,8-diazabicyclo[3.2.1]octan-3-yl]-1,2,3,4-tetrahydronaphthalen-2-yl]-6-methyl-thieno[2,3-b]pyridine-2-carboxamide, DIMETHYL SULFOXIDE, Ubiquitin carboxyl-terminal hydrolase 28
Authors:Sauer, F, Karal Nair, R, Kisker, C.
Deposit date:2023-05-12
Release date:2024-05-22
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural basis for the bi-specificity of USP25 and USP28 inhibitors.
Embo Rep., 25, 2024
8P19
DownloadVisualize
BU of 8p19 by Molmil
USP28 USP domain apo
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase 28
Authors:Sauer, F, Karal Nair, R, Kisker, C.
Deposit date:2023-05-11
Release date:2024-05-22
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis for the bi-specificity of USP25 and USP28 inhibitors.
Embo Rep., 25, 2024
8P14
DownloadVisualize
BU of 8p14 by Molmil
USP28 USP domain in complex with Vismodegib
Descriptor: 2-chloranyl-~{N}-(4-chloranyl-3-pyridin-2-yl-phenyl)-4-methylsulfonyl-benzamide, CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase 28
Authors:Sauer, F, Karal Nair, R, Kisker, C.
Deposit date:2023-05-11
Release date:2024-05-22
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Structural basis for the bi-specificity of USP25 and USP28 inhibitors.
Embo Rep., 25, 2024
3T88
DownloadVisualize
BU of 3t88 by Molmil
Crystal structure of Escherichia coli MenB in complex with substrate analogue, OSB-NCoA
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, CHLORIDE ION, GLYCEROL, ...
Authors:Li, H.-J, Li, X, Liu, N, Zhang, H, Truglio, J, Mishra, S, Kisker, C, Garcia-Diaz, M, Tonge, P.
Deposit date:2011-08-01
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Mechanism of the Intramolecular Claisen Condensation Reaction Catalyzed by MenB, a Crotonase Superfamily Member.
Biochemistry, 50, 2011
3T8A
DownloadVisualize
BU of 3t8a by Molmil
Crystal structure of Mycobacterium tuberculosis MenB in complex with substrate analogue, OSB-NCoA
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, o-succinylbenzoyl-N-coenzyme A
Authors:Li, H.-J, Li, X, Liu, N, Zhang, H, Truglio, J, Mishra, S, Kisker, C, Garcia-Diaz, M, Tonge, P.
Deposit date:2011-08-01
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:Mechanism of the Intramolecular Claisen Condensation Reaction Catalyzed by MenB, a Crotonase Superfamily Member.
Biochemistry, 50, 2011
2X23
DownloadVisualize
BU of 2x23 by Molmil
crystal structure of M. tuberculosis InhA inhibited by PT70
Descriptor: 5-HEXYL-2-(2-METHYLPHENOXY)PHENOL, DIMETHYL SULFOXIDE, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], ...
Authors:Luckner, S.R, Liu, N, am Ende, C.W, Tonge, P.J, Kisker, C.
Deposit date:2010-01-10
Release date:2010-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:A Slow, Tight Binding Inhibitor of Inha, the Enoyl-Acyl Carrier Protein Reductase from Mycobacterium Tuberculosis.
J.Biol.Chem., 285, 2010
2X22
DownloadVisualize
BU of 2x22 by Molmil
crystal structure of M. tuberculosis InhA inhibited by PT70
Descriptor: 5-HEXYL-2-(2-METHYLPHENOXY)PHENOL, DIMETHYL SULFOXIDE, ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], ...
Authors:Luckner, S.R, Liu, N, am Ende, C.W, Tonge, P.J, Kisker, C.
Deposit date:2010-01-10
Release date:2010-03-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Slow, Tight Binding Inhibitor of Inha, the Enoyl-Acyl Carrier Protein Reductase from Mycobacterium Tuberculosis.
J.Biol.Chem., 285, 2010
3T89
DownloadVisualize
BU of 3t89 by Molmil
Crystal structure of Escherichia coli MenB, the 1,4-dihydroxy-2-naphthoyl-CoA synthase in vitamin K2 biosynthesis
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, GLYCEROL, MALONATE ION
Authors:Li, H.-J, Li, X, Liu, N, Zhang, H, Truglio, J, Mishra, S, Kisker, C, Garcia-Diaz, M, Tonge, P.
Deposit date:2011-08-01
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Mechanism of the Intramolecular Claisen Condensation Reaction Catalyzed by MenB, a Crotonase Superfamily Member.
Biochemistry, 50, 2011
4PN7
DownloadVisualize
BU of 4pn7 by Molmil
Crystal Structure of the TFIIH p34 N-terminal Domain
Descriptor: Putative transcription factor
Authors:Schmitt, D.R, Kuper, J, Elias, A, Kisker, C.
Deposit date:2014-05-23
Release date:2014-07-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The Structure of the TFIIH p34 Subunit Reveals a Von Willebrand Factor A Like Fold.
Plos One, 9, 2014
3T8B
DownloadVisualize
BU of 3t8b by Molmil
Crystal structure of Mycobacterium tuberculosis MenB with altered hexameric assembly
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, GLYCEROL
Authors:Li, H.-J, Li, X, Liu, N, Zhang, H, Truglio, J, Mishra, S, Kisker, C, Garcia-Diaz, M, Tonge, P.
Deposit date:2011-08-01
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Mechanism of the Intramolecular Claisen Condensation Reaction Catalyzed by MenB, a Crotonase Superfamily Member.
Biochemistry, 50, 2011
5LY9
DownloadVisualize
BU of 5ly9 by Molmil
Structure of MITat 1.1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Variant surface glycoprotein MITAT 1.1, ...
Authors:Schaefer, C, Bartossek, T, Jones, N, Kuper, J, Kisker, C, Engstler, M.
Deposit date:2016-09-26
Release date:2017-09-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for the shielding function of the dynamic trypanosome variant surface glycoprotein coat.
Nat Microbiol, 2, 2017
6FDU
DownloadVisualize
BU of 6fdu by Molmil
Structure of Chlamydia trachomatis effector protein Cdu1 bound to Compound 3
Descriptor: (2~{S},3~{S})-2-[[(2~{S})-2-[3,5-bis(chloranyl)phenyl]-2-(dimethylamino)ethanoyl]amino]-~{N}-[[2-(iminomethyl)pyrimidin-4-yl]methyl]-3-methyl-pentanamide, CHLORIDE ION, Deubiquitinase and deneddylase Dub1
Authors:Ramirez, Y, Kisker, C, Altmann, E.
Deposit date:2017-12-26
Release date:2018-08-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis of Substrate Recognition and Covalent Inhibition of Cdu1 from Chlamydia trachomatis.
ChemMedChem, 13, 2018
6FDQ
DownloadVisualize
BU of 6fdq by Molmil
Structure of Chlamydia trachomatis effector protein Cdu1 bound to Compound 5
Descriptor: Deubiquitinase and deneddylase Dub1, N-benzyl-2-[(Z)-iminomethyl]pyrimidine-5-carboxamide
Authors:Ramirez, Y, Kisker, C, Altmann, E.
Deposit date:2017-12-26
Release date:2018-08-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis of Substrate Recognition and Covalent Inhibition of Cdu1 from Chlamydia trachomatis.
ChemMedChem, 13, 2018

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon