Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 946 results

4Q33
DownloadVisualize
BU of 4q33 by Molmil
Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and A110
Descriptor: 4-[(1R)-1-[1-(4-chlorophenyl)-1,2,3-triazol-4-yl]ethoxy]-1-oxidanyl-quinoline, ACETIC ACID, FORMIC ACID, ...
Authors:Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Gu, M, Zhang, M, Mandapati, K, Gollapalli, D.R, Gorla, S.K, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-04-10
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.885 Å)
Cite:Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and A110
TO BE PUBLISHED
4PZK
DownloadVisualize
BU of 4pzk by Molmil
Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Maltseva, N, Kim, Y, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-03-31
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.
To be Published
4PWZ
DownloadVisualize
BU of 4pwz by Molmil
Crystal structure of TolB protein from Yersinia pestis CO92
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Maltseva, N, Kim, Y, Osipiuk, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-03-21
Release date:2014-04-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.732 Å)
Cite:Crystal structure of TolB protein from Yersinia pestis CO92
To be Published
4Q32
DownloadVisualize
BU of 4q32 by Molmil
Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and C91
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, N-(naphthalen-2-yl)-2-[2-(pyridin-2-yl)-1H-benzimidazol-1-yl]acetamide
Authors:Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Gu, M, Zhang, M, Mandapati, K, Gollapalli, D.R, Gorla, S.K, Hedstrom, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-04-10
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.788 Å)
Cite:Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and C91
To be Published
4QI9
DownloadVisualize
BU of 4qi9 by Molmil
Crystal structure of dihydrofolate reductase from Yersinia pestis complexed with methotrexate
Descriptor: Dihydrofolate reductase, METHOTREXATE
Authors:Maltseva, N, Kim, Y, Makowska-Grzyska, M, Mulligan, R, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-05-30
Release date:2014-07-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.297 Å)
Cite:Crystal structure of dihydrofolate reductase from Yersinia pestis complexed with methotrexate
To be Published
7W9W
DownloadVisualize
BU of 7w9w by Molmil
2.02 angstrom cryo-EM structure of the pump-like channelrhodopsin ChRmine
Descriptor: CHOLESTEROL, ChRmine, PALMITIC ACID, ...
Authors:Kishi, K.E, Kim, Y, Fukuda, M, Yamashita, K, Deisseroth, K, Kato, H.E.
Deposit date:2021-12-11
Release date:2022-02-02
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (2 Å)
Cite:Structural basis for channel conduction in the pump-like channelrhodopsin ChRmine.
Cell, 185, 2022
5YO9
DownloadVisualize
BU of 5yo9 by Molmil
Crystal structure of KAS III from Acinetobacter baumannii
Descriptor: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein, COENZYME A, GLYCEROL
Authors:Lee, W.C, Jung, M, Lee, J, Kim, Y.
Deposit date:2017-10-27
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of a novel KAS III from Acinetobacter baumannii
to be published
5YOA
DownloadVisualize
BU of 5yoa by Molmil
Crystal structure of KAS III from Acinetobacter baumannii
Descriptor: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein, OCTANOYL-COENZYME A
Authors:Lee, W.C, Jung, M, Lee, J, Kim, Y.
Deposit date:2017-10-27
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of a novel KAS III from Acinetobacter baumannii
to be published
5YPV
DownloadVisualize
BU of 5ypv by Molmil
Crystal structure of FabD from Acinetobacter baumannii
Descriptor: Malonyl CoA-acyl carrier protein transacylase
Authors:Lee, W.C, Kim, Y.
Deposit date:2017-11-03
Release date:2018-11-07
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Elucidation of the crystal structure of FabD from the multidrug-resistant bacterium Acinetobacter baumannii.
Biochem.Biophys.Res.Commun., 505, 2018
5YZU
DownloadVisualize
BU of 5yzu by Molmil
Crystal structure of KAS III from Acinetobacter baumannii
Descriptor: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein
Authors:Lee, W.C, Jung, M, Lee, J, Kim, Y.
Deposit date:2017-12-15
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.122 Å)
Cite:Crystal structure of a novel KAS III from Acinetobacter baumannii
to be published
6A9N
DownloadVisualize
BU of 6a9n by Molmil
Crystal structure of KAS III from Propionibacterium acnes
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3, GLYCEROL, POTASSIUM ION
Authors:Lee, W.C, Cheon, D, Kim, Y.
Deposit date:2018-07-14
Release date:2019-07-17
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Crystal structure of KAS III from Propionibacterium acnes
to be published
6BLG
DownloadVisualize
BU of 6blg by Molmil
Crystal Structure of Sugar Transaminase from Klebsiella pneumoniae Complexed with PLP
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Maltseva, N, Kim, Y, Shatsman, S, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-11-10
Release date:2017-11-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Crystal Structure of Sugar Transaminase from Klebsiella pneumoniae Complexed with PLP
To Be Published
6BIC
DownloadVisualize
BU of 6bic by Molmil
2.25 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic inhibitor
Descriptor: (phenylmethyl) ~{N}-[(9~{S},12~{S},15~{S})-9-(hydroxymethyl)-12-(2-methylpropyl)-6,11,14-tris(oxidanylidene)-1,5,10,13,18,19-hexazabicyclo[15.2.1]icosa-17(20),18-dien-15-yl]carbamate, 3C-like protease
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Weerawarna, P.M, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2017-11-01
Release date:2018-11-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Putative structural rearrangements associated with the interaction of macrocyclic inhibitors with norovirus 3CL protease.
Proteins, 87, 2019
6BIB
DownloadVisualize
BU of 6bib by Molmil
1.95 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic inhibitor
Descriptor: 3C-like protease, benzyl [(9S,12S,15S)-12-(cyclohexylmethyl)-9-(hydroxymethyl)-6,11,14-trioxo-1,5,10,13,18,19-hexaazabicyclo[15.2.1]icosa-17(20),18-dien-15-yl]carbamate
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Weerawarna, P.M, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2017-11-01
Release date:2018-11-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Putative structural rearrangements associated with the interaction of macrocyclic inhibitors with norovirus 3CL protease.
Proteins, 87, 2019
6BID
DownloadVisualize
BU of 6bid by Molmil
1.15 A resolution structure of Norovirus 3CL protease in complex with a triazole-based macrocyclic inhibitor
Descriptor: 3C-like protease, benzyl [(8S,11S,14S)-11-(cyclohexylmethyl)-8-(hydroxymethyl)-5,10,13-trioxo-1,4,9,12,17,18-hexaazabicyclo[14.2.1]nonadeca-16(19),17-dien-14-yl]carbamate
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Weerawarna, P.M, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2017-11-01
Release date:2018-11-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Putative structural rearrangements associated with the interaction of macrocyclic inhibitors with norovirus 3CL protease.
Proteins, 87, 2019
6MN5
DownloadVisualize
BU of 6mn5 by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(3)-IVa, H154A mutant, in complex with gentamicin C1A
Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDR OXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ...
Authors:Stogios, P.J, Evdokimova, E, Kim, Y, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-10-01
Release date:2018-10-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
6LVU
DownloadVisualize
BU of 6lvu by Molmil
Crystal structure of apo acyl carrier protein from Thermotoga maritima
Descriptor: Acyl carrier protein, ZINC ION
Authors:Lee, Y, Lee, W.C, Kim, Y.
Deposit date:2020-02-05
Release date:2020-04-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.294 Å)
Cite:Structural Characterization of an ACP fromThermotoga maritima: Insights into Hyperthermal Adaptation.
Int J Mol Sci, 21, 2020
6LVT
DownloadVisualize
BU of 6lvt by Molmil
Solution structure of holo acyl carrier protein from Thermotoga maritima
Descriptor: Acyl carrier protein
Authors:Lee, Y, Kim, Y.
Deposit date:2020-02-05
Release date:2020-12-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of an ACP from Thermotoga maritima : Insights into Hyperthermal Adaptation.
Int J Mol Sci, 21, 2020
7RH8
DownloadVisualize
BU of 7rh8 by Molmil
Crystal structure of Fur1p from Candida albicans, in complex with UTP
Descriptor: URIDINE 5'-TRIPHOSPHATE, Uracil phosphoribosyltransferase
Authors:Stogios, P.J, Skarina, T, Kim, Y, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-16
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of Fur1p from Candida albicans, in complex with UTP
To Be Published
6N9M
DownloadVisualize
BU of 6n9m by Molmil
Crystal Structure of Adenosine Deaminase from Salmonella typhimurium with Pentostatin (Deoxycoformycin)
Descriptor: 2'-DEOXYCOFORMYCIN, Adenosine deaminase, CALCIUM ION, ...
Authors:Maltseva, N, Kim, Y, Grimshaw, S, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-12-03
Release date:2019-02-06
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Crystal Structure of Adenosine Deaminase from Salmonella typhimurium Complexed with Pentostatin (Deoxycoformycin) (CASP target)
To Be Published
8D5I
DownloadVisualize
BU of 8d5i by Molmil
Crystal structure of dihydropteroate synthase H182G mutant (folP-SMZ_B27) from soil uncultured bacterium in complex with pteroic acid and pyrophosphate
Descriptor: PTEROIC ACID, PYROPHOSPHATE 2-, folP-SMZ_B27
Authors:Stogios, P.J, Skarina, T, Kim, Y, Di Leo, R, Venkatesan, M, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-06-04
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of dihydropteroate synthase H182G mutant (folP-SMZ_B27) from soil uncultured bacterium in complex with pteroic acid
To Be Published
1S9U
DownloadVisualize
BU of 1s9u by Molmil
Atomic structure of a putative anaerobic dehydrogenase component
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, putative component of anaerobic dehydrogenases
Authors:Qiu, Y, Zhang, R, Tereshko, V, Kim, Y, Collart, F, Joachimiak, A, Kossiakoff, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-02-05
Release date:2004-06-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:The 1.38 A crystal structure of DmsD protein from Salmonella typhimurium, a proofreading chaperone on the Tat pathway.
Proteins, 71, 2008
3FLE
DownloadVisualize
BU of 3fle by Molmil
SE_1780 protein of unknown function from Staphylococcus epidermidis.
Descriptor: SE_1780 protein
Authors:Osipiuk, J, Hatzos, C, Clancy, S, Kim, Y, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-12-18
Release date:2009-01-13
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.009 Å)
Cite:X-ray crystal structure of SE_1780 protein of unknown function from Staphylococcus epidermidis.
To be Published
7LAP
DownloadVisualize
BU of 7lap by Molmil
Crystal structure of aminoglycoside acetyltransferase AAC(3)-Xa
Descriptor: Aminoglycoside N(3)-acetyltransferase, CHLORIDE ION, D(-)-TARTARIC ACID, ...
Authors:Stogios, P.J, Skarina, T, Kim, Y, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-01-06
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural and molecular rationale for the diversification of resistance mediated by the Antibiotic_NAT family.
Commun Biol, 5, 2022
7KAG
DownloadVisualize
BU of 7kag by Molmil
Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2
Descriptor: 1,2-ETHANEDIOL, Non-structural protein 3, SULFATE ION
Authors:Stogios, P.J, Skarina, T, Chang, C, Kim, Y, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-09-30
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Crystal structure of the ubiquitin-like domain 1 (Ubl1) of Nsp3 from SARS-CoV-2
To Be Published

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon