Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 149 件

1MKC
DownloadVisualize
BU of 1mkc by Molmil
C-TERMINAL DOMAIN OF MIDKINE
分子名称: PROTEIN (MIDKINE)
著者Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
登録日1999-03-16
公開日1999-03-23
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
1MKN
DownloadVisualize
BU of 1mkn by Molmil
N-TERMINAL HALF OF MIDKINE
分子名称: PROTEIN (MIDKINE)
著者Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
登録日1999-03-16
公開日1999-03-23
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
1E8T
DownloadVisualize
BU of 1e8t by Molmil
Structure of the multifunctional paramyxovirus hemagglutinin-neuraminidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Crennell, S, Takimoto, T, Portner, A, Taylor, G.
登録日2000-10-01
公開日2001-04-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the Multifunctional Paramyxovirus Hemagglutinin-Neuraminidase
Nat.Struct.Biol., 7, 2000
1UKL
DownloadVisualize
BU of 1ukl by Molmil
Crystal structure of Importin-beta and SREBP-2 complex
分子名称: Importin beta-1 subunit, Sterol regulatory element binding protein-2
著者Lee, S.J, Sekimoto, T, Yamashita, E, Nagoshi, E, Nakagawa, A, Imamoto, N, Yoshimura, M, Sakai, H, Tsukihara, T, Yoneda, Y.
登録日2003-08-26
公開日2003-12-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Structure of Importin-beta Bound to SREBP-2: Nuclear Import of a Transcription Factor
Science, 302, 2003
1WQ3
DownloadVisualize
BU of 1wq3 by Molmil
Escherichia coli tyrosyl-tRNA synthetase mutant complexed with 3-iodo-L-tyrosine
分子名称: 3-IODO-TYROSINE, Tyrosyl-tRNA synthetase
著者Kobayashi, T, Sakamoto, K, Nureki, O, Takimura, T, Kamata, K, Sekine, R, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-09-20
公開日2005-01-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of nonnatural amino acid recognition by an engineered aminoacyl-tRNA synthetase for genetic code expansion
Proc.Natl.Acad.Sci.USA, 102, 2005
1WQ4
DownloadVisualize
BU of 1wq4 by Molmil
Escherichia coli tyrosyl-tRNA synthetase mutant complexed with L-tyrosine
分子名称: TYROSINE, Tyrosyl-tRNA synthetase
著者Kobayashi, T, Sakamoto, K, Nureki, O, Takimura, T, Kamata, K, Sekine, R, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-09-20
公開日2005-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of nonnatural amino acid recognition by an engineered aminoacyl-tRNA synthetase for genetic code expansion
Proc.Natl.Acad.Sci.USA, 102, 2005
1P3C
DownloadVisualize
BU of 1p3c by Molmil
Glutamyl endopeptidase from Bacillus intermedius
分子名称: glutamyl-endopeptidase
著者Meijers, R, Blagova, E.V, Levdikov, V.M, Rudenskaya, G.N, Chestukhina, G.G, Akimkina, T.V, Kostrov, S.V, Lamzin, V.S, Kuranova, I.P.
登録日2003-04-17
公開日2004-04-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structure of glutamyl endopeptidase from Bacillus intermedius reveals a structural link between zymogen activation and charge compensation.
Biochemistry, 43, 2004
1P3E
DownloadVisualize
BU of 1p3e by Molmil
Structure of Glu endopeptidase in complex with MPD
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, glutamyl-endopeptidase
著者Meijers, R, Blagova, E.V, Levdikov, V.M, Rudenskaya, G.N, Chestukhina, G.G, Akimkina, T.V, Kostrov, S.V, Lamzin, V.S, Kuranova, I.P.
登録日2003-04-17
公開日2004-04-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The crystal structure of glutamyl endopeptidase from Bacillus intermedius reveals a structural link between zymogen activation and charge compensation.
Biochemistry, 43, 2004
3W81
DownloadVisualize
BU of 3w81 by Molmil
Human alpha-l-iduronidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, ...
著者Maita, N, Tsukimura, T, Taniguchi, T, Saito, S, Ohno, K, Taniguchi, H, Sakuraba, H.
登録日2013-03-11
公開日2013-08-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Human alpha-L-iduronidase uses its own N-glycan as a substrate-binding and catalytic module
Proc.Natl.Acad.Sci.USA, 110, 2013
1VBM
DownloadVisualize
BU of 1vbm by Molmil
Crystal structure of the Escherichia coli tyrosyl-tRNA synthetase complexed with Tyr-AMS
分子名称: 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE, SULFATE ION, Tyrosyl-tRNA synthetase
著者Kobayashi, T, Sakamoto, K, Takimura, T, Kamata, K, Sekine, R, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-27
公開日2005-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural snapshots of the KMSKS loop rearrangement for amino acid activation by bacterial tyrosyl-tRNA synthetase.
J.Mol.Biol., 346, 2005
3W82
DownloadVisualize
BU of 3w82 by Molmil
Human alpha-L-iduronidase in complex with iduronic acid
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-L-iduronidase, ...
著者Maita, N, Tsukimura, T, Taniguchi, T, Saito, S, Ohno, K, Taniguchi, H, Sakuraba, H.
登録日2013-03-11
公開日2013-08-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Human alpha-L-iduronidase uses its own N-glycan as a substrate-binding and catalytic module
Proc.Natl.Acad.Sci.USA, 110, 2013
1VBN
DownloadVisualize
BU of 1vbn by Molmil
Escherichia coli tyrosyl-tRNA synthetase mutant complexed with Tyr-AMS
分子名称: 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE, Tyrosyl-tRNA synthetase
著者Kobayashi, T, Sakamoto, K, Takimura, T, Kamata, K, Sekine, R, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-02-27
公開日2005-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of nonnatural amino acid recognition by an engineered aminoacyl-tRNA synthetase for genetic code expansion
Proc.Natl.Acad.Sci.USA, 102, 2005
1USX
DownloadVisualize
BU of 1usx by Molmil
Crystal structure of the Newcastle disease virus hemagglutinin-neuraminidase complexed with thiosialoside
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, HEMAGGLUTININ-NEURAMINIDASE GLYCOPROTEIN, N-acetyl-alpha-neuraminic acid-(2-6)-methyl 6-thio-beta-D-galactopyranoside
著者Zaitsev, V, Itzstein, M, Groves, D, Kiefel, M, Takimoto, T, Portner, A, Taylor, G.
登録日2003-12-01
公開日2004-03-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Second Sialic Acid Binding Site in Newcastle Disease Virus Hemagglutinin-Neuraminidase: Implications for Fusion
J.Virol., 78, 2004
1USR
DownloadVisualize
BU of 1usr by Molmil
Newcastle disease virus hemagglutinin-neuraminidase: Evidence for a second sialic acid binding site and implications for fusion
分子名称: 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID, 2-acetamido-2-deoxy-alpha-D-glucopyranose, CALCIUM ION, ...
著者Zaitsev, V, Von Itzstein, M, Groves, D, Kiefel, M, Takimoto, T, Portner, A, Taylor, G.
登録日2003-11-28
公開日2004-01-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Second Sialic Acid Binding Site in Newcastle Disease Virus Hemagglutinin-Neuraminidase: Implications for Fusion
J.Virol., 78, 2004
3A2O
DownloadVisualize
BU of 3a2o by Molmil
Crystal Structure of HIV-1 Protease Complexed with KNI-1689
分子名称: (4R)-3-[(2S,3S)-3-{[(4-amino-2,6-dimethylphenoxy)acetyl]amino}-2-hydroxy-4-phenylbutanoyl]-5,5-dimethyl-N-(2-methylprop -2-en-1-yl)-1,3-thiazolidine-4-carboxamide, GLYCEROL, PROTEASE
著者Adachi, M, Tamada, T, Hidaka, K, Kimura, T, Kiso, Y, Kuroki, R.
登録日2009-05-26
公開日2010-03-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (0.88 Å)
主引用文献Small-sized human immunodeficiency virus type-1 protease inhibitors containing allophenylnorstatine to explore the S2' pocket.
J.Med.Chem., 52, 2009
5XT2
DownloadVisualize
BU of 5xt2 by Molmil
Crystal structures of full-length FixJ from B. japonicum crystallized in space group P212121
分子名称: FORMIC ACID, GLYCEROL, MAGNESIUM ION, ...
著者Nishizono, Y, Hisano, T, Shiro, Y, Sawai, H, Wright, G.S.A, Saeki, A, Hikima, T, Nakamura, H, Yamamoto, M, Antonyuk, S.V, Hasnain, S.S.
登録日2017-06-16
公開日2018-05-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.652 Å)
主引用文献Architecture of the complete oxygen-sensing FixL-FixJ two-component signal transduction system.
Sci Signal, 11, 2018
2EIH
DownloadVisualize
BU of 2eih by Molmil
Crystal Structure of NAD-dependent alcohol dehydrogenase
分子名称: Alcohol dehydrogenase, ZINC ION
著者Kamiya, N, Hikima, T, Matsu, T, Maoka, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-13
公開日2008-03-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure analysis of putative NAD-dependent alcohol dehydrogenase from Thermus thermophilus HB8
To be published
5XSO
DownloadVisualize
BU of 5xso by Molmil
Crystal structure of full-length FixJ from B. japonicum crystallized in space group C2221
分子名称: FORMIC ACID, GLYCEROL, Response regulator FixJ
著者Nishizono, Y, Hisano, T, Sawai, H, Shiro, Y, Nakamura, H, Wright, G.S.A, Saeki, A, Hikima, T, Yamamoto, M, Antonyuk, S.V, Hasnain, S.S.
登録日2017-06-14
公開日2018-05-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.778 Å)
主引用文献Architecture of the complete oxygen-sensing FixL-FixJ two-component signal transduction system.
Sci Signal, 11, 2018
1IT6
DownloadVisualize
BU of 1it6 by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CALYCULIN A AND THE CATALYTIC SUBUNIT OF PROTEIN PHOSPHATASE 1
分子名称: CALYCULIN A, MANGANESE (II) ION, SERINE/THREONINE PROTEIN PHOSPHATASE 1 GAMMA (PP1-GAMMA) CATALYTIC SUBUNIT
著者Kita, A, Matsunaga, S, Takai, A, Kataiwa, H, Wakimoto, T, Fusetani, N, Isobe, M, Miki, K.
登録日2002-01-09
公開日2002-05-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the complex between calyculin A and the catalytic subunit of protein phosphatase 1.
Structure, 10, 2002
1YJ7
DownloadVisualize
BU of 1yj7 by Molmil
Crystal structure of enteropathogenic E.coli (EPEC) type III secretion system protein EscJ
分子名称: GLYCEROL, PHOSPHATE ION, escJ
著者Yip, C.K, Kimbrough, T.G, Felise, H.B, Vuckovic, M, Thomas, N.A, Pfuetzner, R.A, Frey, E.A, Finlay, B.B, Miller, S.I, Strynadka, N.C.J.
登録日2005-01-13
公開日2005-06-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural characterization of the molecular platform for type III secretion system assembly.
Nature, 435, 2005
2ANL
DownloadVisualize
BU of 2anl by Molmil
X-ray crystal structure of the aspartic protease plasmepsin 4 from the malarial parasite plasmodium malariae bound to an allophenylnorstatine based inhibitor
分子名称: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, plasmepsin IV
著者Clemente, J.C, Govindasamy, L, Madabushi, A, Fisher, S.Z, Moose, R.E, Yowell, C.A, Hidaka, K, Kimura, T, Hayashi, Y, Kiso, Y, Agbandje-McKenna, M, Dame, J.B, Dunn, B.M, McKenna, R.
登録日2005-08-11
公開日2006-04-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the aspartic protease plasmepsin 4 from the malarial parasite Plasmodium malariae bound to an allophenylnorstatine-based inhibitor.
Acta Crystallogr.,Sect.D, 62, 2006
3W5K
DownloadVisualize
BU of 3w5k by Molmil
Crystal structure of Snail1 and importin beta complex
分子名称: Importin subunit beta-1, ZINC ION, Zinc finger protein SNAI1
著者Choi, S, Yamashita, E, Yasuhara, N, Song, J, Son, S.Y, Won, Y.H, Shin, Y.S, Sekimoto, T, Park, I.Y, Yoneda, Y, Lee, S.J.
登録日2013-01-30
公開日2014-03-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the selective nuclear import of the C2H2 zinc-finger protein Snail by importin beta.
Acta Crystallogr.,Sect.D, 70, 2014
2YR5
DownloadVisualize
BU of 2yr5 by Molmil
Crystal structure of L-phenylalanine oxidase from Psuedomonas sp.P501
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Pro-enzyme of L-phenylalanine oxidase, ...
著者Ida, K, Kurabayashi, M, Suguro, M, Hikima, T, Yamamoto, M, Suzuki, H.
登録日2007-04-02
公開日2008-04-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural basis of proteolytic activation of L-phenylalanine oxidase from Pseudomonas sp. P-501.
J.Biol.Chem., 283, 2008
2EHD
DownloadVisualize
BU of 2ehd by Molmil
Crystal Structure Analysis of Oxidoreductase
分子名称: COBALT (II) ION, Oxidoreductase, short-chain dehydrogenase/reductase family
著者Kamiya, N, Hikima, T, Ebihara, A, Inoue, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-06
公開日2008-03-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure analysis of putative oxidoreductase from Thermus thermophilus HB8
to be published

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon