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PDB: 201 results

4WYS
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BU of 4wys by Molmil
Crystal structure of thiolase from Escherichia coli
Descriptor: Acetyl-CoA acetyltransferase
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2014-11-18
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4WYR
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Crystal structure of thiolase mutation (V77Q,N153Y,A286K) from Clostridium acetobutylicum
Descriptor: Acetyl-CoA acetyltransferase, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2014-11-18
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL4
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Crystal structure of thiolase from Clostridium acetobutylicum in complex with CoA
Descriptor: Acetyl-CoA acetyltransferase, COENZYME A, GLYCEROL
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2015-01-13
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL2
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Crystal structure of oxidized form of thiolase from Clostridium acetobutylicum
Descriptor: ACETATE ION, Acetyl-CoA acetyltransferase, DI(HYDROXYETHYL)ETHER, ...
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2015-01-13
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
4XL3
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Crystal structure of reduced form of thiolase from Clostridium acetobutylicum
Descriptor: Acetyl-CoA acetyltransferase, GLYCEROL
Authors:Kim, S, Ha, S.C, Ahn, J.W, Kim, E.J, Lim, J.H, Kim, K.J.
Deposit date:2015-01-13
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum
Nat Commun, 6, 2015
7DNZ
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BU of 7dnz by Molmil
Cryo-EM structure of the human ABCB6 (Hemin and GSH-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
7DNY
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Cryo-EM structure of the human ABCB6 (coproporphyrin III-bound)
Descriptor: ATP-binding cassette sub-family B member 6, mitochondrial, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kim, S, Lee, S.S, Park, J.G, Kim, J.W, Kim, S, Kim, N.J, Hong, S, Kang, J.Y, Jin, M.S.
Deposit date:2020-12-11
Release date:2022-06-22
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Insights into Porphyrin Recognition by the Human ATP-Binding Cassette Transporter ABCB6.
Mol.Cells, 45, 2022
4XGS
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Crystal structure analysis of novel iron uptake mechanism of Gram-negative bacterial ferritin
Descriptor: Ferritin, GLYCEROL, HYDROXY DIIRON-OXO MOIETY, ...
Authors:Kim, S.
Deposit date:2015-01-02
Release date:2016-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria
J. Mol. Biol., 428, 2016
6K8W
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BU of 6k8w by Molmil
Crystal structure of N-domain with NADP of baterial malonyl-CoA reductase
Descriptor: NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
Authors:Kim, S, Kim, K.-J.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structural insight into bi-functional malonyl-CoA reductase.
Environ.Microbiol., 22, 2020
6K8S
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Crystal structure of C-domain of baterial malonyl-CoA reductase
Descriptor: GLYCEROL, NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR, SULFATE ION
Authors:Kim, S, Kim, K.-J.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insight into bi-functional malonyl-CoA reductase.
Environ.Microbiol., 22, 2020
6KD7
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BU of 6kd7 by Molmil
Crystal structure of geranylgeranyl pyrophosphate synthase
Descriptor: GLYCEROL, MAGNESIUM ION, PYROPHOSPHATE, ...
Authors:Kim, S, Kim, K.-J.
Deposit date:2019-07-01
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of geranylgeranyl pyrophosphate synthase (crtE) from Nonlabens dokdonensis DSW-6.
Biochem.Biophys.Res.Commun., 518, 2019
7Y28
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Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Descriptor: 1-[6-(3-fluorophenyl)benzimidazol-1-yl]-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
Authors:Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
Deposit date:2022-06-09
Release date:2023-07-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y3S
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BU of 7y3s by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Descriptor: 1-(6-bromanyl-7-methyl-imidazo[4,5-b]pyridin-3-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
Authors:Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
Deposit date:2022-06-12
Release date:2023-07-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1W
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BU of 7y1w by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Descriptor: (2R,3S)-2-[3-[4,5-bis(chloranyl)benzimidazol-1-yl]propyl]piperidin-3-ol, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
Authors:Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
Deposit date:2022-06-09
Release date:2023-07-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
7Y1H
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BU of 7y1h by Molmil
Controlling fibrosis using compound with novel binding mode to prolyl-tRNA synthetase 1
Descriptor: 1-(5-chloranyl-4-methyl-benzimidazol-1-yl)-3-[(2R,3S)-3-oxidanylpiperidin-2-yl]propan-2-one, ADENOSINE-5'-TRIPHOSPHATE, Bifunctional glutamate/proline--tRNA ligase, ...
Authors:Kim, S, Yoon, I, Son, J, Park, S, Hwang, K.Y.
Deposit date:2022-06-08
Release date:2023-07-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Control of fibrosis with enhanced safety via asymmetric inhibition of prolyl-tRNA synthetase 1.
Embo Mol Med, 15, 2023
8I70
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BU of 8i70 by Molmil
Crystal structure of NADP-binding form of malonyl-CoA reductase C-domain from Chloroflexus aurantiacus
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Kim, S, Kim, K.-J.
Deposit date:2023-01-30
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cryo-EM structure of bifunctional malonyl-CoA reductase from Chloroflexus aurantiacus reveals a dynamic domain movement for high enzymatic activity.
Int.J.Biol.Macromol., 242, 2023
8I6Z
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BU of 8i6z by Molmil
Crystal structure of apo-form of malonyl-CoA reductase C-domain from Chloroflexus aurantiacus
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Short-chain dehydrogenase/reductase SDR
Authors:Kim, S, Kim, K.-J.
Deposit date:2023-01-30
Release date:2023-06-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Cryo-EM structure of bifunctional malonyl-CoA reductase from Chloroflexus aurantiacus reveals a dynamic domain movement for high enzymatic activity.
Int.J.Biol.Macromol., 242, 2023
6VYP
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BU of 6vyp by Molmil
Crystal structure of the LSD1/CoREST histone demethylase bound to its nucleosome substrate
Descriptor: DNA (191-MER), FLAVIN-ADENINE DINUCLEOTIDE, Histone H2A type 1, ...
Authors:Kim, S, Zhu, J, Eek, P, Yennawar, N, Song, T.
Deposit date:2020-02-27
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.99 Å)
Cite:Crystal Structure of the LSD1/CoREST Histone Demethylase Bound to Its Nucleosome Substrate.
Mol.Cell, 78, 2020
6KIE
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BU of 6kie by Molmil
Crystal structure of human leucyl-tRNA synthetase, Leu-AMS-bound form
Descriptor: 5'-O-(L-leucylsulfamoyl)adenosine, LEUCINE, Leucine--tRNA ligase, ...
Authors:Kim, S, Son, J, Kim, S, Hwang, K.Y.
Deposit date:2019-07-18
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation.
Cell Rep, 35, 2021
6KID
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BU of 6kid by Molmil
Crystal structure of human leucyl-tRNA synthetase, ATP-bound form
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, LEUCINE, Leucine--tRNA ligase, ...
Authors:Kim, S, Son, J, Kim, S, Hwang, K.Y.
Deposit date:2019-07-18
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation.
Cell Rep, 35, 2021
6KQY
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BU of 6kqy by Molmil
Crystal structure of human leucyl-tRNA synthetase, Leucine-bound form
Descriptor: LEUCINE, Leucine--tRNA ligase, cytoplasmic, ...
Authors:Kim, S, Son, J, Kim, S, Hwang, K.Y.
Deposit date:2019-08-20
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation.
Cell Rep, 35, 2021
6KR7
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BU of 6kr7 by Molmil
Crystal structure of methylated human leucyl-tRNA synthetase, Leu-AMS-bound form
Descriptor: 5'-O-(L-leucylsulfamoyl)adenosine, LEUCINE, Leucine--tRNA ligase, ...
Authors:Kim, S, Son, J, Kim, S, Hwang, K.Y.
Deposit date:2019-08-21
Release date:2021-01-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4 Å)
Cite:Leucine-sensing mechanism of leucyl-tRNA synthetase 1 for mTORC1 activation.
Cell Rep, 35, 2021
6K8U
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BU of 6k8u by Molmil
Crystal structure of C-domain with NADP of baterial malonyl-CoA reductase
Descriptor: GLYCEROL, NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Kim, S, Kim, K.-J.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into bi-functional malonyl-CoA reductase.
Environ.Microbiol., 22, 2020
6K8V
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BU of 6k8v by Molmil
Crystal structure of N-domain of baterial malonyl-CoA reductase
Descriptor: GLYCEROL, NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR, SULFATE ION
Authors:Kim, S, Kim, K.-J.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insight into bi-functional malonyl-CoA reductase.
Environ.Microbiol., 22, 2020
6K8T
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BU of 6k8t by Molmil
Crystal structure of C-domain with CoA of baterial malonyl-CoA reductase
Descriptor: COENZYME A, GLYCEROL, NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR, ...
Authors:Kim, S, Kim, K.-J.
Deposit date:2019-06-13
Release date:2020-03-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insight into bi-functional malonyl-CoA reductase.
Environ.Microbiol., 22, 2020

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