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PDB: 302 results

2QO3
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BU of 2qo3 by Molmil
Crystal Structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase
Descriptor: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE, ACETATE ION, ...
Authors:Khosla, C, Cane, E.D, Tang, Y, Chen, Y.A, Kim, C.Y.
Deposit date:2007-07-19
Release date:2007-09-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural and mechanistic analysis of protein interactions in module 3 of the 6-deoxyerythronolide B synthase
Chem.Biol., 14, 2007
3IIA
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BU of 3iia by Molmil
Crystal structure of apo (91-244) RIa subunit of cAMP-dependent protein kinase
Descriptor: GLYCEROL, cAMP-dependent protein kinase type I-alpha regulatory subunit
Authors:Sjoberg, T.J, Kim, C, Kornev, A.P, Taylor, S.S.
Deposit date:2009-07-31
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cyclic AMP analog blocks kinase activation by stabilizing inactive conformation: conformational selection highlights a new concept in allosteric inhibitor design.
Mol.Cell Proteomics, 10, 2011
5BV8
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BU of 5bv8 by Molmil
G1324S mutation in von Willebrand Factor A1 domain
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, von Willebrand factor
Authors:Campbell, J.C, Kim, C, Tischer, A, Auton, M.
Deposit date:2015-06-04
Release date:2015-12-23
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Mutational Constraints on Local Unfolding Inhibit the Rheological Adaptation of von Willebrand Factor.
J.Biol.Chem., 291, 2016
6BDL
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BU of 6bdl by Molmil
Crystal structure of cGMP-dependent protein kinase Ialpha (PKG Ialpha) catalytic domain in apo state
Descriptor: IMIDAZOLE, cGMP-dependent protein kinase 1
Authors:Qin, L, Sankaran, B, Kim, C.
Deposit date:2017-10-23
Release date:2018-10-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of cGMP-dependent protein kinase Ialpha (PKG Ialpha) catalytic domain
to be published
2L8E
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BU of 2l8e by Molmil
Solution NMR structure of FCS domain of Human Polyhomeotic Homolog 1 (HPH1)
Descriptor: Polyhomeotic-like protein 1, ZINC ION
Authors:Ilangovan, U, Kim, C.
Deposit date:2011-01-11
Release date:2011-12-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:1H, 15N and 13C assigned chemical shifts of FCS domain from human polyhomeotic homolog 1
To be Published
2FGG
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BU of 2fgg by Molmil
Crystal Structure of Rv2632c
Descriptor: Hypothetical protein Rv2632c/MT2708
Authors:Yu, M, Bursey, E.H, Radhakannan, T, Segelke, B.W, Lekin, T, Toppani, D, Kim, C.Y, Kaviratne, T, Woodruff, T, Terwilliger, T.C, Hung, L.W, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-12-21
Release date:2006-02-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Rv2632c
To be Published
4RZM
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BU of 4rzm by Molmil
Crystal structure of the Lsd19-lasalocid A complex
Descriptor: CHLORIDE ION, Epoxide hydrolase LasB, FORMIC ACID, ...
Authors:Mathews, I.I, Hotta, K, Chen, X, Kim, C.-Y.
Deposit date:2014-12-22
Release date:2015-01-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Epoxide hydrolase-lasalocid a structure provides mechanistic insight into polyether natural product biosynthesis.
J.Am.Chem.Soc., 137, 2015
2A7Y
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BU of 2a7y by Molmil
Solution Structure of the Conserved Hypothetical Protein Rv2302 from the Bacterium Mycobacterium tuberculosis
Descriptor: Hypothetical protein Rv2302/MT2359
Authors:Buchko, G.W, Kim, C.-Y, Terwilliger, T.C, Kennedy, M.A, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-07-06
Release date:2005-08-23
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the conserved hypothetical protein Rv2302 from Mycobacterium tuberculosis.
J.Bacteriol., 188, 2006
1I4C
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BU of 1i4c by Molmil
THE SOLUTION STRUCTURE OF THE MINOR FAMILY OF THE MUTANT STEM LOOP C 5'UUA3' TRILOOP OF BROME MOSAIC VIRUS (+) STRAND RNA
Descriptor: RNA (5'-R(*GP*GP*UP*GP*CP*UP*UP*AP*GP*CP*AP*CP*C)-3')
Authors:Tinoco Jr, I, Kim, C.-H.
Deposit date:2001-02-20
Release date:2001-04-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural and thermodynamic studies on mutant RNA motifs that impair the specificity between a viral replicase and its promoter.
J.Mol.Biol., 307, 2001
6KU6
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BU of 6ku6 by Molmil
OSM1 mutant - R326A
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Fumarate reductase 2, SUCCINIC ACID
Authors:Park, H.H, Kim, C.M.
Deposit date:2019-08-30
Release date:2020-07-08
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Crystal Structure of the Active Site Mutant Form of Soluble Fumarate Reductase, Osm1
Crystals, 2019
4HPL
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BU of 4hpl by Molmil
PCGF1 Ub fold (RAWUL)/BCOR PUFD Complex
Descriptor: BCL-6 corepressor, Polycomb group RING finger protein 1
Authors:Junco, S.E, Wang, R, Gaipa, J, Taylor, A.B, Gearhart, M.D, Bardwell, V.J, Hart, P.J, Kim, C.A.
Deposit date:2012-10-24
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Polycomb Group Protein PCGF1 in Complex with BCOR Reveals Basis for Binding Selectivity of PCGF Homologs.
Structure, 21, 2013
7UBO
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BU of 7ubo by Molmil
Crystal Structure of the first bromodomain of human BRDT in complex with the inhibitor CCD-956
Descriptor: Bromodomain testis-specific protein, DIMETHYL SULFOXIDE, N-[(2R)-1-(methylamino)-3-{1-[(4-methyl-2-oxo-1,2-dihydroquinolin-6-yl)acetyl]piperidin-4-yl}-1-oxopropan-2-yl]-5-phenylpyridine-2-carboxamide
Authors:Ta, H.M, Modukuri, R.K, Yu, Z, Tan, Z, Matzuk, M.M, Kim, C.
Deposit date:2022-03-15
Release date:2022-06-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Discovery of potent BET bromodomain 1 stereoselective inhibitors using DNA-encoded chemical library selections.
Proc.Natl.Acad.Sci.USA, 119, 2022
3J1Z
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BU of 3j1z by Molmil
Inward-Facing Conformation of the Zinc Transporter YiiP revealed by Cryo-electron Microscopy
Descriptor: Cation efflux family protein
Authors:Coudray, N, Valvo, S, Hu, M, Lasala, R, Kim, C, Vink, M, Zhou, M, Provasi, D, Filizola, M, Tao, J, Fang, J, Penczek, P.A, Ubarretxena-Belandia, I, Stokes, D.L, Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)
Deposit date:2012-07-24
Release date:2012-10-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (13 Å)
Cite:Inward-facing conformation of the zinc transporter YiiP revealed by cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 110, 2013
7L9A
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BU of 7l9a by Molmil
Crystal structure of BRDT bromodomain 2 in complex with CDD-1102
Descriptor: BETA-MERCAPTOETHANOL, Bromodomain testis-specific protein, N~1~-(5-{[3-(4-amino-2-methylphenyl)-1-methyl-1H-indazole-5-carbonyl]amino}-2-methylphenyl)-N~4~-methylbenzene-1,4-dicarboxamide
Authors:Sharma, R, Kaur, G, Yu, Z, Ku, A.F, Anglin, J.L, Ucisik, M.N, Faver, J.C, Sankaran, B, Kim, C, Matzuk, M.M.
Deposit date:2021-01-03
Release date:2021-06-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Discovery and characterization of bromodomain 2-specific inhibitors of BRDT.
Proc.Natl.Acad.Sci.USA, 118, 2021
4NEC
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BU of 4nec by Molmil
Conversion of a Disulfide Bond into a Thioacetal Group during Echinomycin Biosynthesis
Descriptor: 2-CARBOXYQUINOXALINE, ACETATE ION, Echinomycin, ...
Authors:Hotta, K, Keegan, R.M, Ranganathan, S, Fang, M, Bibby, J, Winn, M.D, Sato, M, Lian, M, Watanabe, K, Rigden, D.J, Kim, C.-Y.
Deposit date:2013-10-29
Release date:2014-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conversion of a disulfide bond into a thioacetal group during echinomycin biosynthesis.
Angew.Chem.Int.Ed.Engl., 53, 2014
2FVH
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BU of 2fvh by Molmil
Crystal Structure of Rv1848, a Urease Gamma Subunit UreA (Urea amidohydrolase), from Mycobacterium Tuberculosis
Descriptor: Urease gamma subunit
Authors:Bursey, E.H, Yu, M, TB Structural Genomics Consortium (TBSGC), Lekin, T, Rupp, B, Kim, C.Y, Rho, B.S, Terwilliger, T.C.
Deposit date:2006-01-30
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Rv1848, a Urease Gamma Subunit UreA (Urea amidohydrolase), from Mycobacterium Tuberculosis
To be Published
1W30
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BU of 1w30 by Molmil
PyrR of Mycobacterium Tuberculosis as a potential drug target
Descriptor: PYRR BIFUNCTIONAL PROTEIN
Authors:Kantardjieff, K.A, Vasquez, C, Castro, P, Warfel, N.N, Rho, B.-S, Lekin, T, Kim, C.-Y, Segelke, B.W, Terwilliger, T, Rupp, B, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-07-11
Release date:2004-09-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Pyrr (Rv1379) from Mycobacterium Tuberculosis: A Persistence Gene and Protein Drug Target
Acta Crystallogr.,Sect.D, 61, 2005
4QX5
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BU of 4qx5 by Molmil
Neutron diffraction reveals hydrogen bonds critical for cGMP-selective activation: Insights for PKG agonist design
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, IODIDE ION, cGMP-dependent protein kinase 1
Authors:Huang, G.Y, Gerlits, O.O, Blakeley, M.P, Sankaran, B, Kovalevsky, A.Y, Kim, C.
Deposit date:2014-07-18
Release date:2014-11-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.318 Å)
Cite:Neutron Diffraction Reveals Hydrogen Bonds Critical for cGMP-Selective Activation: Insights for cGMP-Dependent Protein Kinase Agonist Design.
Biochemistry, 53, 2014
4O6G
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BU of 4o6g by Molmil
Rv3902c from M. tuberculosis
Descriptor: Uncharacterized protein
Authors:Reddy, B.G, Moates, D.B, Kim, H, Green, T.J, Kim, C, Terwilliger, T.J, Delucas, L.J, TB Structural Genomics Consortium (TBSGC)
Deposit date:2013-12-20
Release date:2014-03-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:1.55 angstrom resolution X-ray crystal structure of Rv3902c from Mycobacterium tuberculosis.
Acta Crystallogr F Struct Biol Commun, 70, 2014
3IM4
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BU of 3im4 by Molmil
Crystal structure of cAMP-dependent Protein Kinase A Regulatory Subunit I alpha in complex with dual-specific A-Kinase Anchoring Protein 2
Descriptor: Dual specificity A kinase-anchoring protein 2, ZINC ION, cAMP-dependent protein kinase type I-alpha regulatory subunit
Authors:Sarma, G.N, Kinderman, F.S, Kim, C, von Daake, S, Taylor, S.S.
Deposit date:2009-08-09
Release date:2010-02-02
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:Structure of D-AKAP2:PKA RI Complex: Insights into AKAP Specificity and Selectivity
Structure, 18, 2010
1U5H
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BU of 1u5h by Molmil
Structure of Citrate Lyase beta subunit from Mycobacterium tuberculosis
Descriptor: FORMIC ACID, citE
Authors:Goulding, C.W, Lekin, T, Kim, C.Y, Segelke, B, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-07-27
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structure and computational analysis of Mycobacterium tuberculosis protein CitE suggest a novel enzymatic function.
J.Mol.Biol., 365, 2007
4HPM
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BU of 4hpm by Molmil
PCGF1 Ub fold (RAWUL)/BCORL1 PUFD Complex
Descriptor: BCL-6 corepressor-like protein 1, PHOSPHATE ION, Polycomb group RING finger protein 1
Authors:Junco, S.E, Wang, R, Gaipa, J, Taylor, A.B, Gearhart, M.D, Bardwell, V.J, Hart, P.J, Kim, C.A.
Deposit date:2012-10-24
Release date:2013-05-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the Polycomb Group Protein PCGF1 in Complex with BCOR Reveals Basis for Binding Selectivity of PCGF Homologs.
Structure, 21, 2013
3IM3
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BU of 3im3 by Molmil
Crystal structure of PKA RI alpha dimerization/docking domain
Descriptor: FORMIC ACID, cAMP-dependent protein kinase type I-alpha regulatory subunit
Authors:Sarma, G.N, Kinderman, F.S, Kim, C, von Daake, S, Taylor, S.S.
Deposit date:2009-08-09
Release date:2010-02-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of D-AKAP2:PKA RI Complex: Insights into AKAP Specificity and Selectivity
Structure, 18, 2010
1U5V
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BU of 1u5v by Molmil
Structure of CitE complexed with triphosphate group of ATP form Mycobacterium tuberculosis
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, FORMIC ACID, citE
Authors:Goulding, C.W, Lerkin, T, Kim, C.Y, Segelke, B, Terwilliger, T, Eisenberg, E, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-07-28
Release date:2004-10-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Mycobacterium tuberculosis citrate lyase beta subunit and its unusual triphosphate binding site
To be Published
4R4L
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BU of 4r4l by Molmil
Crystal structure of wt cGMP dependent protein kinase I alpha (PKGI alpha) leucine zipper
Descriptor: HEXANE-1,6-DIOL, SULFATE ION, cGMP-dependent protein kinase 1
Authors:Reger, A.S, Guo, E, Yang, M.P, Qin, L, Kim, C.
Deposit date:2014-08-19
Release date:2015-09-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:Structures of cGMP-Dependent Protein Kinase (PKG) I alpha Leucine Zippers Reveal an Interchain Disulfide Bond Important for Dimer Stability.
Biochemistry, 54, 2015

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