Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 57 件

4WFM
DownloadVisualize
BU of 4wfm by Molmil
Structure of the complete bacterial SRP Alu domain
分子名称: Bacillus subtilis small cytoplasmic RNA (scRNA),RNA, COBALT HEXAMMINE(III), MAGNESIUM ION
著者Kempf, G, Wild, K, Sinning, I.
登録日2014-09-15
公開日2014-10-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the complete bacterial SRP Alu domain.
Nucleic Acids Res., 42, 2014
4WFL
DownloadVisualize
BU of 4wfl by Molmil
Structure of the complete bacterial SRP Alu domain
分子名称: COBALT HEXAMMINE(III), MAGNESIUM ION, RNA
著者Kempf, G, Wild, K, Sinning, I.
登録日2014-09-15
公開日2014-10-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure of the complete bacterial SRP Alu domain.
Nucleic Acids Res., 42, 2014
7QNO
DownloadVisualize
BU of 7qno by Molmil
Crystal structure of ligand-free Danio rerio HDAC6 CD1 CD2
分子名称: GLYCEROL, Histone deacetylase 6, POTASSIUM ION, ...
著者Kempf, G, Langousis, G, Sanchez, J, Matthias, P.
登録日2021-12-21
公開日2022-02-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Expression and Crystallization of HDAC6 Tandem Catalytic Domains.
Methods Mol.Biol., 2589, 2023
5NIY
DownloadVisualize
BU of 5niy by Molmil
Signal recognition particle-docking protein FtsY
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Signal recognition particle-docking protein FtsY
著者Kempf, G, Stjepanovic, G, Lapouge, K, Sinning, I.
登録日2017-03-27
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Escherichia coli SRP Receptor Forms a Homodimer at the Membrane.
Structure, 26, 2018
2M7X
DownloadVisualize
BU of 2m7x by Molmil
Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2
分子名称: Na(+)/H(+) antiporter
著者Ullah, A, Kemp, G, Lee, B, Alves, C, Young, H, Sykes, B.D, Fliegel, L.
登録日2013-05-02
公開日2013-06-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and Functional Analysis of Transmembrane Segment IV of the Salt Tolerance Protein Sod2.
J.Biol.Chem., 288, 2013
8PBA
DownloadVisualize
BU of 8pba by Molmil
Cryo-EM structure of Caenorhabditis elegans DPF-3 (apo)
分子名称: Dipeptidyl Peptidase Four (IV) family
著者Gudipati, R.K, Cavadini, S, Kempf, G, Grosshans, H.
登録日2023-06-08
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Cryo-EM structure of Caenorhabditis elegans DPF-3 (apo)
To Be Published
6Y5E
DownloadVisualize
BU of 6y5e by Molmil
Structure of human cGAS (K394E) bound to the nucleosome (focused refinement of cGAS-NCP subcomplex)
分子名称: Cyclic GMP-AMP synthase, DNA (153-MER), Histone H2A type 2-C, ...
著者Pathare, G.R, Cavadini, S, Kempf, G, Thoma, N.H.
登録日2020-02-25
公開日2020-09-23
最終更新日2020-12-09
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural mechanism of cGAS inhibition by the nucleosome.
Nature, 587, 2020
6Y5D
DownloadVisualize
BU of 6y5d by Molmil
Structure of human cGAS (K394E) bound to the nucleosome
分子名称: Cyclic GMP-AMP synthase, DNA (153-MER), Histone H2A type 2-A, ...
著者Pathare, G.R, Cavadini, S, Kempf, G, Thoma, N.H.
登録日2020-02-25
公開日2020-09-23
最終更新日2020-12-09
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural mechanism of cGAS inhibition by the nucleosome.
Nature, 587, 2020
6YOV
DownloadVisualize
BU of 6yov by Molmil
OCT4-SOX2-bound nucleosome - SHL+6
分子名称: DNA (142-MER), Green fluorescent protein,POU domain, class 5, ...
著者Michael, A.K, Kempf, G, Cavadini, S, Bunker, R.D, Thoma, N.H.
登録日2020-04-15
公開日2020-05-06
最終更新日2020-07-08
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Mechanisms of OCT4-SOX2 motif readout on nucleosomes.
Science, 368, 2020
4UE5
DownloadVisualize
BU of 4ue5 by Molmil
Structural basis for targeting and elongation arrest of Bacillus signal recognition particle
分子名称: 7S RNA, SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN, SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN, ...
著者Beckert, B, Kedrov, A, Sohmen, D, Kempf, G, Wild, K, Sinning, I, Stahlberg, H, Wilson, D.N, Beckmann, R.
登録日2014-12-15
公開日2015-09-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Translational Arrest by a Prokaryotic Signal Recognition Particle is Mediated by RNA Interactions.
Nat.Struct.Mol.Biol., 22, 2015
4UE4
DownloadVisualize
BU of 4ue4 by Molmil
Structural basis for targeting and elongation arrest of Bacillus signal recognition particle
分子名称: 6S RNA, FTSQ SIGNAL SEQUENCE, SIGNAL RECOGNITION PARTICLE PROTEIN
著者Beckert, B, Kedrov, A, Sohmen, D, Kempf, G, Wild, K, Sinning, I, Stahlberg, H, Wilson, D.N, Beckmann, R.
登録日2014-12-15
公開日2015-09-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Translational Arrest by a Prokaryotic Signal Recognition Particle is Mediated by RNA Interactions.
Nat.Struct.Mol.Biol., 22, 2015
7Q3E
DownloadVisualize
BU of 7q3e by Molmil
Structure of the mouse CPLANE-RSG1 complex
分子名称: Ciliogenesis and planar polarity effector 2, GUANOSINE-5'-TRIPHOSPHATE, Protein fuzzy homolog, ...
著者Langousis, G, Cavadini, S, Kempf, G, Matthias, P.
登録日2021-10-27
公開日2022-04-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structure of the ciliogenesis-associated CPLANE complex.
Sci Adv, 8, 2022
7Q3D
DownloadVisualize
BU of 7q3d by Molmil
Structure of the human CPLANE complex
分子名称: Protein fuzzy homolog, Protein inturned, WD repeat-containing and planar cell polarity effector protein fritz homolog
著者Langousis, G, Cavadini, S, Kempf, G, Matthias, P.
登録日2021-10-27
公開日2022-04-06
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structure of the ciliogenesis-associated CPLANE complex.
Sci Adv, 8, 2022
7OKQ
DownloadVisualize
BU of 7okq by Molmil
Cryo-EM Structure of the DDB1-DCAF1-CUL4A-RBX1 Complex
分子名称: Cullin-4A, DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, ...
著者Mohamed, W.I, Schenk, A.D, Kempf, G, Cavadini, S, Thoma, N.H.
登録日2021-05-18
公開日2021-10-13
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (8.4 Å)
主引用文献The CRL4 DCAF1 cullin-RING ubiquitin ligase is activated following a switch in oligomerization state.
Embo J., 40, 2021
6T90
DownloadVisualize
BU of 6t90 by Molmil
OCT4-SOX2-bound nucleosome - SHL-6
分子名称: DNA (146-MER), Green fluorescent protein,POU domain, class 5, ...
著者Michael, A.K, Kempf, G, Cavadini, S, Bunker, R.D, Thoma, N.H.
登録日2019-10-25
公開日2020-05-06
最終更新日2020-07-08
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Mechanisms of OCT4-SOX2 motif readout on nucleosomes.
Science, 368, 2020
6T93
DownloadVisualize
BU of 6t93 by Molmil
Nucleosome with OCT4-SOX2 motif at SHL-6
分子名称: DNA (153-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Michael, A.K, Kempf, G, Cavadini, S, Bunker, R.D, Thoma, N.H.
登録日2019-10-25
公開日2020-05-06
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Mechanisms of OCT4-SOX2 motif readout on nucleosomes.
Science, 368, 2020
8R1G
DownloadVisualize
BU of 8r1g by Molmil
Dimeric ternary structure of E6AP-E6-p53
分子名称: Cellular tumor antigen p53, Ubiquitin-like protein SMT3,Protein E6, Ubiquitin-protein ligase E3A, ...
著者Sandate, C.R, Chakrabory, D, Kater, L, Kempf, G, Thoma, N.H.
登録日2023-11-01
公開日2023-12-06
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structural insights into viral hijacking of p53 by E6 and E6AP
Biorxiv, 2023
8OSL
DownloadVisualize
BU of 8osl by Molmil
Cryo-EM structure of CLOCK-BMAL1 bound to the native Por enhancer nucleosome (map 2, additional 3D classification and flexible refinement)
分子名称: Basic helix-loop-helix ARNT-like protein 1, Circadian locomoter output cycles protein kaput, DNA (147-MER), ...
著者Michael, A.K, Stoos, L, Kempf, G, Cavadini, S, Thoma, N.
登録日2023-04-19
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
8OSJ
DownloadVisualize
BU of 8osj by Molmil
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL-6.2 (DNA conformation 1)
分子名称: Basic helix-loop-helix ARNT-like protein 1, Circadian locomoter output cycles protein kaput, DNA (124-MER), ...
著者Michael, A.K, Stoos, L, Kempf, G, Cavadini, S, Thoma, N.H.
登録日2023-04-19
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
8OSK
DownloadVisualize
BU of 8osk by Molmil
Cryo-EM structure of CLOCK-BMAL1 bound to a nucleosomal E-box at position SHL+5.8 (composite map)
分子名称: Basic helix-loop-helix ARNT-like protein 1, Circadian locomoter output cycles protein kaput, DNA (124-MER), ...
著者Stoos, L, Michael, A.K, Kempf, G, Cavadini, S, Thoma, N.H.
登録日2023-04-19
公開日2023-05-24
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
8OTS
DownloadVisualize
BU of 8ots by Molmil
OCT4 and MYC-MAX co-bound to a nucleosome
分子名称: DNA (127-MER), Green fluorescent protein,POU domain, class 5, ...
著者Michael, A.K, Stoos, L, Kempf, G, Cavadini, S, Thoma, N.
登録日2023-04-21
公開日2023-05-24
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
8OTT
DownloadVisualize
BU of 8ott by Molmil
MYC-MAX bound to a nucleosome at SHL+5.8
分子名称: DNA (144-MER), Histone H2A type 1-B/E, Histone H2A type 1-K, ...
著者Stoos, L, Michael, A.K, Kempf, G, Kater, L, Cavadini, S, Thoma, N.
登録日2023-04-21
公開日2023-05-24
最終更新日2023-09-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cooperation between bHLH transcription factors and histones for DNA access.
Nature, 619, 2023
8R1F
DownloadVisualize
BU of 8r1f by Molmil
Monomeric E6AP-E6-p53 ternary complex
分子名称: Cellular tumor antigen p53, Ubiquitin-like protein SMT3,Protein E6, Ubiquitin-protein ligase E3A, ...
著者Sandate, C.R, Chakraborty, D, Kater, L, Kempf, G, Thoma, N.H.
登録日2023-11-01
公開日2023-12-06
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structural insights into viral hijacking of p53 by E6 and E6AP
Biorxiv, 2023
8P82
DownloadVisualize
BU of 8p82 by Molmil
Cryo-EM structure of dimeric UBR5
分子名称: E3 ubiquitin-protein ligase UBR5, ZINC ION
著者Aguirre, J.D, Kater, L, Kempf, G, Cavadini, S, Thoma, N.H.
登録日2023-05-31
公開日2023-06-14
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献UBR5 forms ligand-dependent complexes on chromatin to regulate nuclear hormone receptor stability.
Mol.Cell, 83, 2023
8BUM
DownloadVisualize
BU of 8bum by Molmil
Structure of DDB1 bound to DS15-engaged CDK12-cyclin K
分子名称: (2R)-2-[[6-(5-naphthalen-1-ylpentylamino)-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
著者Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
登録日2022-11-30
公開日2023-09-20
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024

 

123>

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon