5NIY

Signal recognition particle-docking protein FtsY

Summary for 5NIY

• Entry DOI: 10.2210/pdb5niy/pdb
• Descriptor: Signal recognition particle-docking protein FtsY, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER (3 entities in total)
• Functional Keywords: srp, gtpase, nucleotide, receptor, signaling protein
• Biological source: Escherichia coli
• Total number of polymer chains: 1
• Total formula weight: 34526.26

Authors

Kempf, G.,Stjepanovic, G.,Lapouge, K.,Sinning, I. (deposition date: 2017-03-27, release date: 2018-10-10, Last modification date: 2024-01-17)

Primary citation

Kempf, G.,Stjepanovic, G.,Sloan, J.,Hendricks, A.,Lapouge, K.,Sinning, I.
The Escherichia coli SRP Receptor Forms a Homodimer at the Membrane.
Structure, 26:1440-1450.e5, 2018

PubMed Abstract: The Escherichia coli signal recognition particle (SRP) receptor, FtsY, plays a fundamental role in co-translational targeting of membrane proteins via the SRP pathway. Efficient targeting relies on membrane interaction of FtsY and heterodimerization with the SRP protein Ffh, which is driven by detachment of α helix (αN1) in FtsY. Here we show that apart from the heterodimer, FtsY forms a nucleotide-dependent homodimer on the membrane, and upon αN1 removal also in solution. Homodimerization triggers reciprocal stimulation of GTP hydrolysis and occurs in vivo. Biochemical characterization together with integrative modeling suggests that the homodimer employs the same interface as the heterodimer. Structure determination of FtsY NG+1 with GMPPNP shows that a dimerization-induced conformational switch of the γ-phosphate is conserved in Escherichia coli, filling an important gap in SRP GTPase activation. Our findings add to the current understanding of SRP GTPases and may challenge previous studies that did not consider homodimerization of FtsY.

PubMed: 30146170
DOI: 10.1016/j.str.2018.07.008

Experimental method

X-RAY DIFFRACTION (1.7 Å)