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PDB: 118 results

5IDL
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Crystal structure of the germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT8
Authors:Julien, J.P, Ereno-Orbea, J, Jardine, J.G, Schief, W.R, Wilson, I.A.
Deposit date:2016-02-24
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:HIV-1 broadly neutralizing antibody precursor B cells revealed by germline-targeting immunogen.
Science, 351, 2016
5VKJ
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Crystal structure of human CD22 Ig domains 1-3
Descriptor: B-cell receptor CD22, GLYCEROL, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Julien, J.P, Ereno-Orbea, J, Sicard, T.
Deposit date:2017-04-21
Release date:2017-10-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Molecular basis of human CD22 function and therapeutic targeting.
Nat Commun, 8, 2017
5VKM
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Crystal structure of human CD22 Ig domains 1-3 in complex with alpha 2-6 sialyllactose
Descriptor: B-cell receptor CD22, GLYCEROL, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Julien, J.P, Ereno-Orbea, J, Sicard, T.
Deposit date:2017-04-21
Release date:2017-10-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis of human CD22 function and therapeutic targeting.
Nat Commun, 8, 2017
2P8L
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Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ELLELDKWASLWN
Descriptor: gp41 peptide, nmAb 2F5, heavy chain, ...
Authors:Julien, J.P, Bryson, S, Pai, E.F.
Deposit date:2007-03-22
Release date:2007-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
2P8M
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Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ELLELDKWASLWN in new crystal form
Descriptor: gp41 peptide, nmAb 2F5, heavy chain, ...
Authors:Julien, J.P, Bryson, S, Pai, E.F.
Deposit date:2007-03-22
Release date:2007-05-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural details of HIV-1 recognition by the broadly neutralizing monoclonal antibody 2F5: epitope conformation, antigen-recognition loop mobility, and anion-binding site.
J.Mol.Biol., 384, 2008
3IDG
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Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ALDKWD
Descriptor: 2F5 Fab heavy chain, 2F5 Fab light chain, gp41 MPER peptide
Authors:Julien, J.P, Bryson, S, Pai, E.F.
Deposit date:2009-07-21
Release date:2010-03-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications.
J.Virol., 83, 2009
6CCB
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BU of 6ccb by Molmil
Crystal structure of 253-11 SOSIP trimer in complex with 10-1074 Fab
Descriptor: 10-1074 FAB heavy chain, 10-1074 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Moyo, T, Ereno-Orbea, J, Dorfman, J, Julien, J.P.
Deposit date:2018-02-06
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (6.5 Å)
Cite:Molecular Basis of Unusually High Neutralization Resistance in Tier 3 HIV-1 Strain 253-11.
J. Virol., 92, 2018
7O52
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CD22 d6-d7 in complex with Fab m971
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD22 d6-d7 Ig domains, GLYCEROL, ...
Authors:Ereno-Orbea, J, Sicard, T, Julien, J.P.
Deposit date:2021-04-07
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural details of monoclonal antibody m971 recognition of the membrane-proximal domain of CD22.
J.Biol.Chem., 297, 2021
7O4Y
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m971 Fab in complex with anti-Kappa VHH domain
Descriptor: Anti-Kappa VHH domain, m971 Fab heavy chain, m971 Fab light chain
Authors:Ereno-Orbea, J, Sicard, T, Julien, J.P.
Deposit date:2021-04-07
Release date:2021-07-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural details of monoclonal antibody m971 recognition of the membrane-proximal domain of CD22.
J.Biol.Chem., 297, 2021
4YAQ
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Crystal structure of a computationally optimized PG9 mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PG9_N100FY Fab heavy chain, ...
Authors:Murrell, S, Julien, J.P, Wilson, I.A.
Deposit date:2015-02-17
Release date:2015-06-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Redesigned HIV antibodies exhibit enhanced neutralizing potency and breadth.
J.Clin.Invest., 125, 2015
7K9Z
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Crystal structure of SARS-CoV-2 receptor binding domain in complex with the Fab fragments of neutralizing antibodies 298 and 52
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 298 Fab Heavy Chain, 298 Fab Light Chain, ...
Authors:Newton, J.C, Kucharska, I, Rujas, E, Cui, H, Julien, J.P.
Deposit date:2020-09-29
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Multivalency transforms SARS-CoV-2 antibodies into ultrapotent neutralizers.
Nat Commun, 12, 2021
6PHG
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BU of 6phg by Molmil
Predicted germline variant of human transmission blocking antibody 2544
Descriptor: GLYCEROL, Germline 2544 Antibody Fab, Heavy Chain, ...
Authors:McLeod, B.R, Julien, J.P.
Deposit date:2019-06-25
Release date:2019-10-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25.
Nat Commun, 10, 2019
6PHD
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BU of 6phd by Molmil
Pfs25 in complex with the human transmission blocking antibody 2586
Descriptor: 25 kDa ookinete surface antigen, 2586 Antibody Fab, Heavy Chain, ...
Authors:McLeod, B.R, Julien, J.P.
Deposit date:2019-06-25
Release date:2019-10-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Potent antibody lineage against malaria transmission elicited by human vaccination with Pfs25.
Nat Commun, 10, 2019
7JOO
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BU of 7joo by Molmil
Crystal structure of ICOS in complex with antibody STIM003 and anti-kappa VHH domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Inducible T-cell costimulator, ...
Authors:Rujas, E, Sicard, T, Julien, J.P.
Deposit date:2020-08-06
Release date:2020-10-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural characterization of the ICOS/ICOS-L immune complex reveals high molecular mimicry by therapeutic antibodies.
Nat Commun, 11, 2020
7N0A
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BU of 7n0a by Molmil
Structure of Human Leukaemia Inhibitory Factor with Fab MSC1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Leukemia inhibitory factor, ...
Authors:Raman, S, Bosch, A, Fransson, J, Julien, J.P.
Deposit date:2021-05-25
Release date:2022-06-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Therapeutic Targeting of LIF Overcomes Macrophage-mediated Immunosuppression of the Local Tumor Microenvironment.
Clin.Cancer Res., 29, 2023
7OOI
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BU of 7ooi by Molmil
Anti-EphA1 JD1 VH domain
Descriptor: JD1 VH domain, SULFATE ION
Authors:Ereno-Orbea, J, Nilvebrant, J, Sidhu, S, Julien, J.P.
Deposit date:2021-05-27
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Systematic Engineering of Optimized Autonomous Heavy-Chain Variable Domains.
J.Mol.Biol., 433, 2021
7OMN
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BU of 7omn by Molmil
Anti-EphA1 JD1-1 VH domain
Descriptor: GLYCEROL, IMIDAZOLE, JD1-1 VH domain
Authors:Ereno Orbea, J, Nilvebrant, J, Sidhu, S, Julien, J.P.
Deposit date:2021-05-24
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Systematic Engineering of Optimized Autonomous Heavy-Chain Variable Domains.
J.Mol.Biol., 433, 2021
8DNN
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BU of 8dnn by Molmil
Crystal structure of neutralizing antibody 80 in complex with SARS-CoV-2 receptor binding domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 80 FAB HEAVY CHAIN, 80 FAB LIGHT CHAIN, ...
Authors:Muthuraman, K, Kucharska, I, Ivanochko, D, Julien, J.P.
Deposit date:2022-07-11
Release date:2023-05-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:A multi-specific, multi-affinity antibody platform neutralizes sarbecoviruses and confers protection against SARS-CoV-2 in vivo.
Sci Transl Med, 15, 2023
8F9E
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BU of 8f9e by Molmil
Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein KQPA peptide
Descriptor: Circumsporozoite protein KQPA peptide, Ky15.2 Antibody, heavy chain, ...
Authors:Thai, E, Julien, J.P.
Deposit date:2022-11-23
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
8F95
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Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein DND peptide
Descriptor: 1,2-ETHANEDIOL, Circumsporozoite protein DND peptide, Ky15.2 Antibody, ...
Authors:Thai, E, Julien, J.P.
Deposit date:2022-11-23
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
8F9F
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BU of 8f9f by Molmil
Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein NANP3 peptide
Descriptor: 1,2-ETHANEDIOL, Circumsporozoite protein NANP peptide, Ky15.2 Antibody, ...
Authors:Thai, E, Julien, J.P.
Deposit date:2022-11-23
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
8FG0
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Crystal structure of the 3764 Fab in complex with the C-terminal PfCSP linker, PfCSP281-294.
Descriptor: 3764 Fab Heavy chain, 3764 Fab Light chain, Circumsporozoite protein
Authors:Burn Aschner, C, Julien, J.P.
Deposit date:2022-12-11
Release date:2023-05-10
Last modified:2023-06-14
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Molecular and functional properties of human Plasmodium falciparum CSP C-terminus antibodies.
Embo Mol Med, 15, 2023
8FAT
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BU of 8fat by Molmil
Crystal structure of Ky224 Fab in complex with circumsporozoite protein NPDP peptide
Descriptor: Circumsporozoite protein NPDP peptide, Ky224 Antibody, heavy chain, ...
Authors:Kassardjian, A, Thai, E, Julien, J.P.
Deposit date:2022-11-28
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
8F9S
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BU of 8f9s by Molmil
Crystal structure of Ky15.2 Fab in complex with circumsporozoite protein NDN peptide
Descriptor: 1,2-ETHANEDIOL, Circumsporozoite protein NDN peptide, Ky15.2 Antibody, ...
Authors:Thai, E, Julien, J.P.
Deposit date:2022-11-24
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023
8FAN
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BU of 8fan by Molmil
Crystal structure of Ky15.1 Fab in complex with circumsporozoite protein KQPA peptide
Descriptor: Circumsporozoite protein KQPA peptide, Ky15.1 Antibody, heavy chain, ...
Authors:Burn Aschner, C, Thai, E, Julien, J.P.
Deposit date:2022-11-28
Release date:2023-11-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular determinants of cross-reactivity and potency by VH3-33 antibodies against the Plasmodium falciparum circumsporozoite protein.
Cell Rep, 42, 2023

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