Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 142 results

2XB1
DownloadVisualize
BU of 2xb1 by Molmil
Crystal structure of the human Pygo2 PHD finger in complex with the B9L HD1 domain
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, PYGOPUS HOMOLOG 2, ...
Authors:Miller, T.C, Rutherford, T.J, Johnson, C.M, Fiedler, M, Bienz, M.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Allosteric Remodeling of the Histone H3 Binding Pocket in the Pygo2 Phd Finger Triggered by its Binding to the B9L/Bcl9 Co-Factor.
J.Mol.Biol., 401, 2010
1XGK
DownloadVisualize
BU of 1xgk by Molmil
CRYSTAL STRUCTURE OF N12G AND A18G MUTANT NMRA
Descriptor: CHLORIDE ION, GLYCEROL, NITROGEN METABOLITE REPRESSION REGULATOR NMRA, ...
Authors:Lamb, H.K, Ren, J, Park, A, Johnson, C, Leslie, K, Cocklin, S, Thompson, P, Mee, C, Cooper, A, Stammers, D.K, Hawkins, A.R.
Deposit date:2004-09-17
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Modulation of the ligand binding properties of the transcription repressor NmrA by GATA-containing DNA and site-directed mutagenesis
Protein Sci., 13, 2004
3S1A
DownloadVisualize
BU of 3s1a by Molmil
Crystal structure of the phosphorylation-site double mutant S431E/T432E of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Williams, D.W, Rossi, G, Weigand, S, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
Deposit date:2011-05-14
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Combined SAXS/EM Based Models of the S. elongatus Post-Translational Circadian Oscillator and its Interactions with the Output His-Kinase SasA.
Plos One, 6, 2011
1TI7
DownloadVisualize
BU of 1ti7 by Molmil
CRYSTAL STRUCTURE OF NMRA, A NEGATIVE TRANSCRIPTIONAL REGULATOR, IN COMPLEX WITH NADP AT 1.7A RESOLUTION
Descriptor: CHLORIDE ION, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Lamb, H.K, Leslie, K, Dodds, A.L, Nutley, M, Cooper, A, Johnson, C, Thompson, P, Stammers, D.K, Hawkins, A.R.
Deposit date:2004-06-02
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The negative transcriptional regulator NmrA discriminates between oxidized and reduced dinucleotides.
J.Biol.Chem., 278, 2003
2J5C
DownloadVisualize
BU of 2j5c by Molmil
Rational conversion of substrate and product specificity in a monoterpene synthase. Structural insights into the molecular basis of rapid evolution.
Descriptor: 1,8-CINEOLE SYNTHASE, BETA-MERCAPTOETHANOL
Authors:Kampranis, S.C, Ioannidis, D, Purvis, A, Mahrez, W, Ninga, E, Katerelos, N.A, Anssour, S, Dunwell, J.M, Makris, A.M, Goodenough, P.W, Johnson, C.B.
Deposit date:2006-09-14
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rational Conversion of Substrate and Product Specificity in a Salvia Monoterpene Synthase: Structural Insights Into the Evolution of Terpene Synthase Function.
Plant Cell, 19, 2007
4CB9
DownloadVisualize
BU of 4cb9 by Molmil
Structure of full-length CTNNBL1 in P43212 space group
Descriptor: BETA-CATENIN-LIKE PROTEIN 1
Authors:Ganesh, K, vanMaldegem, F, Telerman, S.B, Simpson, P, Johnson, C.M, Williams, R.L, Neuberger, M.S, Rada, C.
Deposit date:2013-10-10
Release date:2013-12-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and Mutational Analysis Reveals that Ctnnbl1 Binds Nlss in a Manner Distinct from that of its Closest Armadillo-Relative, Karyopherin Alpha
FEBS Lett., 588, 2014
4BL6
DownloadVisualize
BU of 4bl6 by Molmil
Bicaudal-D uses a parallel, homodimeric coiled coil with heterotypic registry to co-ordinate recruitment of cargos to dynein
Descriptor: ARGININE, PROTEIN BICAUDAL D
Authors:Liu, Y, Salter, H.K, Holding, A.N, Johnson, C.M, Stephens, E, Lukavsky, P.J, Walshaw, J, Bullock, S.L.
Deposit date:2013-05-02
Release date:2013-06-12
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Bicaudal-D Uses a Parallel, Homodimeric Coiled Coil with Heterotypic Registry to Coordinate Recruitment of Cargos to Dynein
Genes Dev., 27, 2013
3RHY
DownloadVisualize
BU of 3rhy by Molmil
Crystal structure of the dimethylarginine dimethylaminohydrolase adduct with 4-chloro-2-hydroxymethylpyridine
Descriptor: (4-chloropyridin-2-yl)methanol, N(G),N(G)-dimethylarginine dimethylaminohydrolase
Authors:Monzingo, A.F, Johnson, C.M, Ke, Z, Yoon, D.-W, Linsky, T.W, Guo, H, Fast, W, Robertus, J.D.
Deposit date:2011-04-12
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:On the mechanism of dimethylarginine dimethylaminohydrolase inactivation by 4-halopyridines.
J.Am.Chem.Soc., 133, 2011
2YMT
DownloadVisualize
BU of 2ymt by Molmil
gamma 2 adaptin EAR domain crystal structure with phage peptide GEEWGPWV
Descriptor: 1,3-PROPANDIOL, AP-1 COMPLEX SUBUNIT GAMMA-LIKE 2, PHAGE DISPLAY DERIVED GAMMA 2 ADAPTIN EAR DOMAIN BINDING PEPTIDE
Authors:Juergens, M.C, Voros, J, Rautureau, G, Shepherd, D, Pye, V.E, Muldoon, J, Johnson, C.M, Ashcroft, A, Freund, S.M.V, Ferguson, N.
Deposit date:2012-10-10
Release date:2013-07-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:The Hepatitis B Virus Pres1 Domain Hijacks Host Trafficking Proteins by Motif Mimicry.
Nat.Chem.Biol., 9, 2013
2GBL
DownloadVisualize
BU of 2gbl by Molmil
Crystal Structure of Full Length Circadian Clock Protein KaiC with Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Williams, D.R, Pattanayek, S, Xu, Y, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
Deposit date:2006-03-10
Release date:2007-01-23
Last modified:2021-07-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Analysis of KaiA-KaiC protein interactions in the cyano-bacterial circadian clock using hybrid structural methods.
Embo J., 25, 2006
1TF7
DownloadVisualize
BU of 1tf7 by Molmil
Crystal Structure of Circadian Clock Protein KaiC
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, KaiC
Authors:Pattanayek, R, Wang, J, Mori, T, Xu, Y, Johnson, C.H, Egli, M.
Deposit date:2004-05-26
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Visualizing a Circadian Clock Protein; Crystal Structure of KaiC and Functional Insights
Mol.Cell, 15, 2004
2J2S
DownloadVisualize
BU of 2j2s by Molmil
Solution structure of the nonmethyl-CpG-binding CXXC domain of the leukaemia-associated MLL histone methyltransferase
Descriptor: ZINC FINGER PROTEIN HRX, ZINC ION
Authors:Allen, M.D, Grummitt, C.G, Hilcenko, C, Young-Min, S, Tonkin, L.M, Johnson, C.M, Bycroft, M, Warren, A.J.
Deposit date:2006-08-17
Release date:2006-08-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of the Nonmethyl-Cpg-Binding Cxxc Domain of the Leukaemia-Associated Mll Histone Methyltransferase
Embo J., 25, 2006
2Y9U
DownloadVisualize
BU of 2y9u by Molmil
Structural basis of p63a SAM domain mutants involved in AEC syndrome
Descriptor: SULFATE ION, TUMOR PROTEIN 63
Authors:Sathyamurthy, A, Freund, S.M.V, Johnson, C.M, Allen, M.D.
Deposit date:2011-02-16
Release date:2011-08-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of P63Alpha Sam Domain Mutants Involved in Aec Syndrome.
FEBS J., 278, 2011
2WQG
DownloadVisualize
BU of 2wqg by Molmil
SAP domain from Tho1: L31W (fluorophore) mutant
Descriptor: PROTEIN THO1
Authors:Dodson, C.A, Ferguson, N, Rutherford, T.J, Johnson, C.M, Fersht, A.R.
Deposit date:2009-08-21
Release date:2010-02-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Engineering a Two-Helix Bundle Protein for Folding Studies.
Protein Eng.Des.Sel., 23, 2010
1KMV
DownloadVisualize
BU of 1kmv by Molmil
HUMAN DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND (Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE (SRI-9662), A LIPOPHILIC ANTIFOLATE
Descriptor: (Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE, DIHYDROFOLATE REDUCTASE, DIMETHYL SULFOXIDE, ...
Authors:Klon, A.E, Heroux, A, Ross, L.J, Pathak, V, Johnson, C.A, Piper, J.R, Borhani, D.W.
Deposit date:2001-12-17
Release date:2002-07-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Atomic structures of human dihydrofolate reductase complexed with NADPH and two lipophilic antifolates at 1.09 a and 1.05 a resolution.
J.Mol.Biol., 320, 2002
1U9I
DownloadVisualize
BU of 1u9i by Molmil
Crystal Structure of Circadian Clock Protein KaiC with Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, KaiC, MAGNESIUM ION
Authors:Xu, Y, Mori, T, Pattanayek, R, Pattanayek, S, Egli, M, Johnson, C.H.
Deposit date:2004-08-09
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses
PROC.NATL.ACAD.SCI.USA, 101, 2004
1KMS
DownloadVisualize
BU of 1kms by Molmil
HUMAN DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND 6-([5-QUINOLYLAMINO]METHYL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE (SRI-9439), A LIPOPHILIC ANTIFOLATE
Descriptor: 6-([5-QUINOLYLAMINO]METHYL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE, DIHYDROFOLATE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Klon, A.E, Heroux, A, Ross, L.J, Pathak, V, Johnson, C.A, Piper, J.R, Borhani, D.W.
Deposit date:2001-12-17
Release date:2002-07-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Atomic structures of human dihydrofolate reductase complexed with NADPH and two lipophilic antifolates at 1.09 a and 1.05 a resolution.
J.Mol.Biol., 320, 2002
2Y9T
DownloadVisualize
BU of 2y9t by Molmil
Structural basis of p63a SAM domain mutants involved in AEC syndrome
Descriptor: TUMOR PROTEIN 63
Authors:Sathyamurthy, A, Freund, S.M.V, Johnson, C.M, Allen, M.D.
Deposit date:2011-02-16
Release date:2011-08-03
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural Basis of P63Alpha Sam Domain Mutants Involved in Aec Syndrome.
FEBS J., 278, 2011
1COA
DownloadVisualize
BU of 1coa by Molmil
THE EFFECT OF CAVITY CREATING MUTATIONS IN THE HYDROPHOBIC CORE OF CHYMOTRYPSIN INHIBITOR 2
Descriptor: CHYMOTRYPSIN INHIBITOR 2
Authors:Jackson, S.E, Moracci, M, Elmasry, N, Johnson, C.M, Fersht, A.R.
Deposit date:1993-05-14
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Effect of cavity-creating mutations in the hydrophobic core of chymotrypsin inhibitor 2.
Biochemistry, 32, 1993
3UMS
DownloadVisualize
BU of 3ums by Molmil
Crystal structure of the G202A mutant of human G-alpha-i1
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Lambert, N.A, Johnston, C.A, Cappell, S.D, Kuravi, S, Kimple, A.J, Willard, F.S, Siderovski, D.P.
Deposit date:2011-11-14
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.343 Å)
Cite:Correction for Regulators of G-protein Signaling accelerate GPCR signaling kinetics and govern sensitivity solely by accelerating GTPase activity
Proc.Natl.Acad.Sci.USA, 2012
4S1Z
DownloadVisualize
BU of 4s1z by Molmil
Crystal structure of TRABID NZF1 in complex with K29 linked di-Ubiquitin
Descriptor: Ubiquitin, Ubiquitin thioesterase ZRANB1, ZINC ION
Authors:Kristariyanto, Y.A, Abdul Rehman, S.A, Campbell, D.G, Morrice, N.A, Johnson, C, Toth, R, Kulathu, Y.
Deposit date:2015-01-16
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:K29-selective ubiquitin binding domain reveals structural basis of specificity and heterotypic nature of k29 polyubiquitin.
Mol.Cell, 58, 2015
2WUS
DownloadVisualize
BU of 2wus by Molmil
Bacterial actin MreB assembles in complex with cell shape protein RodZ
Descriptor: PUTATIVE UNCHARACTERIZED PROTEIN, ROD SHAPE-DETERMINING PROTEIN MREB
Authors:van den Ent, F, Johnson, C.M, Persons, L, deBoer, P, Lowe, J.
Deposit date:2009-10-08
Release date:2010-06-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Bacterial Actin Mreb Assembles in Complex with Cell Shape Protein Rodz.
Embo J., 29, 2010
1XUF
DownloadVisualize
BU of 1xuf by Molmil
TRYPSIN-BABIM-ZN+2, PH 8.2
Descriptor: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE ZINC, CALCIUM ION, TRYPSIN
Authors:Katz, B.A, Clark, J.M, Finer-Moore, J.S, Jenkins, T.E, Johnson, C.R, Rose, M.J, Luong, C, Moore, W.R, Stroud, R.M.
Deposit date:1997-10-10
Release date:1998-12-16
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of potent selective zinc-mediated serine protease inhibitors.
Nature, 391, 1998
1XUH
DownloadVisualize
BU of 1xuh by Molmil
TRYPSIN-KETO-BABIM-CO+2, PH 8.2
Descriptor: BIS(5-AMIDINO-2-BENZIMIDAZOLYL)METHANONE, CALCIUM ION, COBALT (II) ION, ...
Authors:Katz, B.A, Clark, J.M, Finer-Moore, J.S, Jenkins, T.E, Johnson, C.R, Rose, M.J, Luong, C, Moore, W.R, Stroud, R.M.
Deposit date:1997-10-10
Release date:1998-11-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design of potent selective zinc-mediated serine protease inhibitors.
Nature, 391, 1998
1XUK
DownloadVisualize
BU of 1xuk by Molmil
TRYPSIN-BABIM-SULFATE, PH 5.9
Descriptor: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, CALCIUM ION, SULFATE ION, ...
Authors:Katz, B.A, Clark, J.M, Finer-Moore, J.S, Jenkins, T.E, Johnson, C.R, Rose, M.J, Luong, C, Moore, W.R, Stroud, R.M.
Deposit date:1997-10-10
Release date:1998-11-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design of potent selective zinc-mediated serine protease inhibitors.
Nature, 391, 1998

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon