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PDB: 139 results

4CZ5
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Truncated tetramerization domain of zebrafish p53 (crystal form I)
Descriptor: CELLULAR TUMOR ANTIGEN P53
Authors:Joerger, A.C.
Deposit date:2014-04-16
Release date:2014-08-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Tracing the Evolution of the P53 Tetramerization Domain
Structure, 22, 2014
4CZ7
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BU of 4cz7 by Molmil
Truncated tetramerization domain of zebrafish p53 (crystal form III)
Descriptor: CELLULAR TUMOR ANTIGEN P53, GLYCEROL, PHOSPHATE ION
Authors:Joerger, A.C.
Deposit date:2014-04-16
Release date:2014-08-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Tracing the Evolution of the P53 Tetramerization Domain
Structure, 22, 2014
4CZ6
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BU of 4cz6 by Molmil
Truncated tetramerization domain of zebrafish p53 (crystal form II)
Descriptor: CELLULAR TUMOR ANTIGEN P53, DI(HYDROXYETHYL)ETHER
Authors:Joerger, A.C.
Deposit date:2014-04-16
Release date:2014-08-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Tracing the Evolution of the P53 Tetramerization Domain
Structure, 22, 2014
4D1L
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BU of 4d1l by Molmil
Tetramerization domain of zebrafish p53 (crystal form I)
Descriptor: CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C.
Deposit date:2014-05-02
Release date:2014-08-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Tracing the Evolution of the P53 Tetramerization Domain
Structure, 22, 2014
4D1M
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BU of 4d1m by Molmil
Tetramerization domain of zebrafish p53 (crystal form II)
Descriptor: CELLULAR TUMOR ANTIGEN P53, ZINC ION
Authors:Joerger, A.C.
Deposit date:2014-05-02
Release date:2014-08-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Tracing the Evolution of the P53 Tetramerization Domain
Structure, 22, 2014
1DZY
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BU of 1dzy by Molmil
L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant E214A
Descriptor: BETA-MERCAPTOETHANOL, L-FUCULOSE-1-PHOSPHATE ALDOLASE, SULFATE ION, ...
Authors:Joerger, A.C, Schulz, G.E.
Deposit date:2000-03-07
Release date:2000-06-02
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis
Biochemistry, 39, 2000
1DZZ
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BU of 1dzz by Molmil
L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant Y113F
Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ...
Authors:Joerger, A.C, Schulz, G.E.
Deposit date:2000-03-07
Release date:2000-06-02
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis
Biochemistry, 39, 2000
1DZV
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BU of 1dzv by Molmil
L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant Y113F/Y209F
Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ...
Authors:Joerger, A.C, Schulz, G.E.
Deposit date:2000-03-07
Release date:2000-06-02
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis
Biochemistry, 39, 2000
1DZU
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BU of 1dzu by Molmil
L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant T26A
Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ...
Authors:Joerger, A.C, Schulz, G.E.
Deposit date:2000-03-07
Release date:2000-06-02
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis
Biochemistry, 39, 2000
1DZX
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BU of 1dzx by Molmil
L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant R212A
Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ...
Authors:Joerger, A.C, Schulz, G.E.
Deposit date:2000-03-07
Release date:2000-06-02
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis
Biochemistry, 39, 2000
1DZW
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BU of 1dzw by Molmil
L-Fuculose-1-Phosphate Aldolase from Escherichia coli Mutant F131A
Descriptor: BETA-MERCAPTOETHANOL, L-fuculose phosphate aldolase, SULFATE ION, ...
Authors:Joerger, A.C, Schulz, G.E.
Deposit date:2000-03-07
Release date:2000-06-02
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Catalytic Action of Fuculose 1-Phosphate Aldolase (Class II) as Derived from Structure-Directed Mutagenesis
Biochemistry, 39, 2000
8A31
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BU of 8a31 by Molmil
p53 cancer mutant Y220C in complex with iodophenol-based small-molecule stabilizer JC694
Descriptor: 4-(3-fluoranylpyrrol-1-yl)-3,5-bis(iodanyl)-2-oxidanyl-benzoic acid, Cellular tumor antigen p53, GLYCEROL, ...
Authors:Balourdas, D.I, Stephenson Clarke, J.R, Baud, M.G.J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2022-06-06
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Discovery of Nanomolar-Affinity Pharmacological Chaperones Stabilizing the Oncogenic p53 Mutant Y220C.
Acs Pharmacol Transl Sci, 5, 2022
8A32
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p53 cancer mutant Y220C in complex with iodophenol-based small-molecule stabilizer JC769
Descriptor: 1,2-ETHANEDIOL, 4-[3,4-bis(fluoranyl)pyrrol-1-yl]-3,5-bis(iodanyl)-2-oxidanyl-benzoic acid, Cellular tumor antigen p53, ...
Authors:Balourdas, D.I, Stephenson Clarke, J.R, Baud, M.G.J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2022-06-06
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovery of Nanomolar-Affinity Pharmacological Chaperones Stabilizing the Oncogenic p53 Mutant Y220C.
Acs Pharmacol Transl Sci, 5, 2022
6ZS3
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BU of 6zs3 by Molmil
Crystal structure of the fifth bromodomain of human protein polybromo-1 in complex with 2-(6-amino-5-(piperazin-1-yl)pyridazin-3-yl)phenol
Descriptor: 1,2-ETHANEDIOL, 2-(6-azanyl-5-piperazin-4-ium-1-yl-pyridazin-3-yl)phenol, Protein polybromo-1
Authors:Preuss, F, Joerger, A.C, Wanior, M, Kraemer, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2020-07-15
Release date:2020-10-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
J.Med.Chem., 63, 2020
6ZN6
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BU of 6zn6 by Molmil
Protein polybromo-1 (PB1 BD2) Bound To MW278
Descriptor: 1,2-ETHANEDIOL, 2-[6-azanyl-5-[(3~{R})-3-phenoxypiperidin-1-yl]pyridazin-3-yl]phenol, Protein polybromo-1
Authors:Preuss, F, Mathea, S, Chatterjee, D, Wanior, M, Joerger, A.C, Knapp, S.
Deposit date:2020-07-06
Release date:2020-08-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
J.Med.Chem., 63, 2020
8BI8
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BU of 8bi8 by Molmil
Structure of a cyclic beta-hairpin peptide derived from neuronal nitric oxide synthase
Descriptor: Nitric oxide synthase, brain
Authors:Balboa, J.R, Ostergaard, S, Stromgaard, K, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2022-11-01
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Development of a Potent Cyclic Peptide Inhibitor of the nNOS/PSD-95 Interaction.
J.Med.Chem., 66, 2023
8BI9
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BU of 8bi9 by Molmil
Structure of a cyclic beta-hairpin peptide derived from neuronal nitric oxide synthase (T112W/T116E variant)
Descriptor: Nitric oxide synthase, brain, TERTIARY-BUTYL ALCOHOL
Authors:Balboa, J.R, Ostergaard, S, Stromgaard, K, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2022-11-01
Release date:2022-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Development of a Potent Cyclic Peptide Inhibitor of the nNOS/PSD-95 Interaction.
J.Med.Chem., 66, 2023
8BZJ
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BU of 8bzj by Molmil
Human MST3 (STK24) kinase in complex with inhibitor MRLW5
Descriptor: 1,2-ETHANEDIOL, 8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one, Serine/threonine-protein kinase 24
Authors:Balourdas, D.I, Rak, M, Tesch, R, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2022-12-14
Release date:2023-01-18
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Development of Selective Pyrido[2,3- d ]pyrimidin-7(8 H )-one-Based Mammalian STE20-Like (MST3/4) Kinase Inhibitors.
J.Med.Chem., 67, 2024
8BZI
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BU of 8bzi by Molmil
Human MST3 (STK24) kinase in complex with inhibitor MR39
Descriptor: 1,2-ETHANEDIOL, 8-(4-azanylbutyl)-6-[2,5-bis(fluoranyl)-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one, Serine/threonine-protein kinase 24
Authors:Balourdas, D.I, Rak, M, Tesch, R, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2022-12-14
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Shifting the selectivity of pyrido[2,3-d]pyrimidin-7(8H)-one inhibitors towards the salt-inducible kinase (SIK) subfamily.
Eur.J.Med.Chem., 254, 2023
8CG7
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BU of 8cg7 by Molmil
Structure of p53 cancer mutant Y220C with arylation at Cys182 and Cys277
Descriptor: 1,2-ETHANEDIOL, 5-iodanyl-2-methylsulfonyl-pyrimidine, Cellular tumor antigen p53, ...
Authors:Balourdas, D.I, Pichon, M.M, Baud, M.G.J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2023-02-03
Release date:2023-12-13
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structure-Reactivity Studies of 2-Sulfonylpyrimidines Allow Selective Protein Arylation.
Bioconjug.Chem., 34, 2023
3ZY1
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BU of 3zy1 by Molmil
Crystal structure of the human p63 tetramerization domain
Descriptor: TUMOR PROTEIN 63
Authors:Natan, E, Joerger, A.C.
Deposit date:2011-08-16
Release date:2011-11-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and Kinetic Stability of the P63 Tetramerization Domain.
J.Mol.Biol., 415, 2012
7PC6
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BU of 7pc6 by Molmil
DNA-binding domain of a p53 homolog from the hydrothermal vent annelid Alvinella pompejana
Descriptor: 1,2-ETHANEDIOL, DNA-binding domain, ZINC ION
Authors:Balourdas, D.-I, Knapp, S, Soussi, T, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2021-08-03
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Evolutionary history of the p53 family DNA-binding domain: insights from an Alvinella pompejana homolog.
Cell Death Dis, 13, 2022
7Q8A
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BU of 7q8a by Molmil
Crystal structure of tandem domain RRM1-2 of FUBP-interacting repressor (FIR) bound to FUSE ssDNA fragment
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(P*GP*T)-3'), Poly(U)-binding-splicing factor PUF60, ...
Authors:Ni, X, Joerger, A.C, Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-11-10
Release date:2022-11-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of tandem domain RRM1-2 of FIR bound to FUSE ssDNA fragment
To Be Published
9F1M
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BU of 9f1m by Molmil
First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 45
Descriptor: 1,2-ETHANEDIOL, 1-[2-[7-[2-[4-[2-[2-[2-[4-[3-(dimethylamino)propoxy]phenyl]ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzimidazol-1-yl]ethyl]piperazin-1-yl]ethanoylamino]heptanoylamino]-3,3-dimethyl-butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Bromodomain-containing protein 4, ...
Authors:Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2024-04-19
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.90001261 Å)
Cite:First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 45
to be published
9F1N
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First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 46
Descriptor: (2S,4R)-1-[(2S)-2-[9-[2-[4-[2-[2-[2-[4-[3-(dimethylamino)propoxy]phenyl]ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)benzimidazol-1-yl]ethyl]piperazin-1-yl]ethanoylamino]nonanoylamino]-3,3-dimethyl-butanoyl]-N-[[4-(4-methyl-4H-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ...
Authors:Balourdas, D.I, Edmonds, A.K, Marsh, G.P, Maple, H.J, Spencer, J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2024-04-19
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.71000016 Å)
Cite:First bromodomain of BRD4 in complex with ISOX-DUAL based degrader 46
to be published

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