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PDB: 135 results

4CEV
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ARGINASE FROM BACILLUS CALDEVELOX, L-ORNITHINE COMPLEX
Descriptor: GUANIDINE, L-ornithine, MANGANESE (II) ION, ...
Authors:Bewley, M.C, Jeffrey, P.D, Patchett, M.L, Kanyo, Z.F, Baker, E.N.
Deposit date:1999-03-15
Release date:1999-04-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily.
Structure Fold.Des., 7, 1999
6CFI
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BU of 6cfi by Molmil
Crystal structure of Rad4-Rad23 bound to a 6-4 photoproduct UV lesion
Descriptor: DNA (5'-D(*AP*TP*TP*GP*TP*AP*GP*CP*(T64)P*TP*GP*GP*AP*TP*GP*TP*TP*GP*AP*GP*TP*CP*A)-3'), DNA repair protein RAD4, DNA('-D(*TP*TP*GP*AP*CP*TP*CP*AP*AP*CP*AP*TP*CP*CP*AP*AP*AP*GP*CP*TP*AP*CP*AP*A)-'), ...
Authors:Min, J, Jeffrey, P.D.
Deposit date:2018-02-15
Release date:2019-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.36241913 Å)
Cite:Structure and mechanism of pyrimidine-pyrimidone (6-4) photoproduct recognition by the Rad4/XPC nucleotide excision repair complex.
Nucleic Acids Res., 47, 2019
6D0H
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BU of 6d0h by Molmil
ParT: Prs ADP-ribosylating toxin bound to cognate antitoxin ParS
Descriptor: GLYCEROL, ParS: COG5642 (DUF2384) antitoxin, ParT: COG5654 (RES domain) toxin
Authors:Piscotta, F.J, Jeffrey, P.D, Link, A.J.
Deposit date:2018-04-10
Release date:2019-01-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:ParST is a widespread toxin-antitoxin module that targets nucleotide metabolism.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5BV0
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BU of 5bv0 by Molmil
Crystal Structure of a Complex Between the SNARE Nyv1 and the HOPS Vps33-Vps16 subcomplex from Chaetomium thermophilum
Descriptor: SM (Sec1/Munc18-like) protein, SNARE domain, Vps16
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-06-04
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
5BUZ
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Crystal Structure of a Complex Between the SNARE Vam3 and the HOPS Vps33-Vps16 subcomplex from Chaetomium thermophilum
Descriptor: Putative vacuolar protein sorting-associated protein, SM (Sec1/Munc18-like) protein, SNAP receptor-like protein
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-06-04
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
5BV1
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Crystal Structure of a Vps33-Vps16 Complex from Chaetomium thermophilum
Descriptor: D-MALATE, Putative vacuolar protein sorting-associated protein, VPS33
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-06-04
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
6E95
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BU of 6e95 by Molmil
Chimeric structure of Saccharomyces cerevisiae GCN4 leucine zipper fused to Staphylococcus aureus AgrC cytoplasmic histidine kinase module (dataset isotropically truncated by HKL2000)
Descriptor: Staphylococcus aureus AgrC histidine kinase module fused to Saccharomyces cerevisiae GCN4 leucine zipper
Authors:Xie, Q, Jeffrey, P.D, Muir, T.W.
Deposit date:2018-07-31
Release date:2019-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of a Molecular Latch that Regulates Staphylococcal Virulence.
Cell Chem Biol, 26, 2019
6D0I
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ParT: Prs ADP-ribosylating toxin bound to cognate antitoxin ParS. L48M ParT, SeMet-substituted complex.
Descriptor: GLYCEROL, ParS: COG5642 (DUF2384) antitoxin fragment, ParT: COG5654 (RES domain) toxin
Authors:Piscotta, F.J, Jeffrey, P.D, Link, A.J.
Deposit date:2018-04-10
Release date:2019-01-09
Last modified:2019-01-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:ParST is a widespread toxin-antitoxin module that targets nucleotide metabolism.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1YY8
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BU of 1yy8 by Molmil
Crystal structure of the Fab fragment from the monoclonal antibody cetuximab/Erbitux/IMC-C225
Descriptor: Cetuximab Fab Heavy chain, Cetuximab Fab Light chain
Authors:Li, S, Schmitz, K.R, Jeffrey, P.D, Wiltzius, J.J.W, Kussie, P, Ferguson, K.M.
Deposit date:2005-02-24
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for inhibition of the epidermal growth factor receptor by cetuximab
Cancer Cell, 7, 2005
1YY9
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Structure of the extracellular domain of the epidermal growth factor receptor in complex with the Fab fragment of cetuximab/Erbitux/IMC-C225
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cetuximab Fab Heavy chain, ...
Authors:Li, S, Schmitz, K.R, Jeffrey, P.D, Wiltzius, J.J.W, Kussie, P, Ferguson, K.M.
Deposit date:2005-02-24
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.605 Å)
Cite:Structural basis for inhibition of the epidermal growth factor receptor by cetuximab
Cancer Cell, 7, 2005
6E52
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BU of 6e52 by Molmil
Chimeric structure of Saccharomyces cerevisiae GCN4 leucine zipper fused to Staphylococcus aureus AgrC cytoplasmic histidine kinase module (dataset anisotropically truncated by STARANISO)
Descriptor: Staphylococcus aureus AgrC histidine kinase module fused to Saccharomyces cerevisiae GCN4 leucine zipper
Authors:Xie, Q, Jeffrey, P.D, Muir, T.W.
Deposit date:2018-07-19
Release date:2019-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Identification of a Molecular Latch that Regulates Staphylococcal Virulence.
Cell Chem Biol, 26, 2019
5CEV
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BU of 5cev by Molmil
ARGINASE FROM BACILLUS CALDEVELOX, L-LYSINE COMPLEX
Descriptor: GUANIDINE, LYSINE, MANGANESE (II) ION, ...
Authors:Bewley, M.C, Jeffrey, P.D, Patchett, M.L, Kanyo, Z.F, Baker, E.N.
Deposit date:1999-03-16
Release date:1999-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily.
Structure Fold.Des., 7, 1999
8CUK
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BU of 8cuk by Molmil
X-ray Structure of the WD40 domain of HOPS subunit Vps11 from Yeast
Descriptor: E3 ubiquitin-protein ligase PEP5
Authors:Port, S.A, Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2022-05-17
Release date:2022-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:X-ray Structure of the WD40 domain of HOPS subunit Vps11 from Yeast
to be published
2IE3
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BU of 2ie3 by Molmil
Structure of the Protein Phosphatase 2A Core Enzyme Bound to Tumor-inducing Toxins
Descriptor: MANGANESE (II) ION, Protein Phosphatase 2, regulatory subunit A (PR 65), ...
Authors:Xing, Y, Xu, Y, Chen, Y, Jeffrey, P.D, Chao, Y, Shi, Y.
Deposit date:2006-09-17
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Protein Phosphatase 2A Core Enzyme Bound to Tumor-Inducing Toxins
Cell(Cambridge,Mass.), 127, 2006
2IE4
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BU of 2ie4 by Molmil
Structure of the Protein Phosphatase 2A Core Enzyme Bound to okadaic acid
Descriptor: MANGANESE (II) ION, OKADAIC ACID, Protein Phosphatase 2, ...
Authors:Xing, Y, Xu, Y, Chen, Y, Jeffrey, P.D, Chao, Y, Shi, Y.
Deposit date:2006-09-17
Release date:2006-11-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Protein Phosphatase 2A Core Enzyme Bound to Tumor-Inducing Toxins
Cell(Cambridge,Mass.), 127, 2006
2HV6
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BU of 2hv6 by Molmil
Crystal structure of the phosphotyrosyl phosphatase activator
Descriptor: MAGNESIUM ION, Protein phosphatase 2A, regulatory subunit B
Authors:Chao, Y, Jeffrey, P.D, Shi, Y.
Deposit date:2006-07-27
Release date:2006-08-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and mechanism of the phosphotyrosyl phosphatase activator.
Mol.Cell, 23, 2006
1P22
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BU of 1p22 by Molmil
Structure of a beta-TrCP1-Skp1-beta-catenin complex: destruction motif binding and lysine specificity on the SCFbeta-TrCP1 ubiquitin ligase
Descriptor: Beta-catenin, F-box/WD-repeat protein 1A, Skp1
Authors:Wu, G, Xu, G, Schulman, B.A, Jeffrey, P.D, Harper, J.W, Pavletich, N.P.
Deposit date:2003-04-14
Release date:2003-07-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of a beta-TrCP1-Skp1-beta-Catenin complex: destruction motif binding and lysine specificity of the SCFbeta-TrCP1 ubiquitin ligase
Mol.Cell, 11, 2003
1PI1
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BU of 1pi1 by Molmil
Crystal structure of a human Mob1 protein; toward understanding Mob-regulated cell cycle pathways.
Descriptor: Mob1A, ZINC ION
Authors:Stavridi, E.S, Harris, K.G, Huyen, Y, Bothos, J, Voewerd, P.M, Stayrook, S.E, Jeffrey, P.D, Pavletich, N.P, Luca, F.C.
Deposit date:2003-05-29
Release date:2003-09-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a human mob1 protein. Toward understanding mob-regulated cell cycle pathways.
Structure, 11, 2003
1P8T
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BU of 1p8t by Molmil
Crystal structure of Nogo-66 Receptor
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, Reticulon 4 receptor
Authors:Barton, W.A, Liu, B.P, Tzvetkova, D, Jeffrey, P.D, Fournier, A.E, Sah, D, Cate, R, Strittmatter, S.M, Nikolov, D.B.
Deposit date:2003-05-07
Release date:2003-05-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and axon outgrowth inhibitor binding of the Nogo-66 receptor and related proteins
Embo J., 22, 2003
5VAE
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BU of 5vae by Molmil
Crystal structure of accessory secretion protein 1 and 3
Descriptor: Accessory Sec system protein Asp1, Accessory Sec system protein Asp3
Authors:Chen, Y, Rapoport, T.A, Jeffrey, P.D.
Deposit date:2017-03-25
Release date:2018-02-21
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (3.106 Å)
Cite:Unraveling the sequence of cytosolic reactions in the export of GspB adhesin fromStreptococcus gordonii.
J. Biol. Chem., 293, 2018
5VAF
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BU of 5vaf by Molmil
Crystal structure of accessory secretion protein 1
Descriptor: Accessory Sec system protein Asp1
Authors:Chen, Y, Rapoport, T.A, Jeffrey, P.D.
Deposit date:2017-03-25
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.771 Å)
Cite:Unraveling the sequence of cytosolic reactions in the export of GspB adhesin fromStreptococcus gordonii.
J. Biol. Chem., 293, 2018
1MYK
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BU of 1myk by Molmil
CRYSTAL STRUCTURE, FOLDING, AND OPERATOR BINDING OF THE HYPERSTABLE ARC REPRESSOR MUTANT PL8
Descriptor: ARC REPRESSOR
Authors:Schildbach, J.F, Milla, M.E, Jeffrey, P.D, Raumann, B.E, Sauer, R.T.
Deposit date:1994-10-12
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure, folding, and operator binding of the hyperstable Arc repressor mutant PL8.
Biochemistry, 34, 1995
5EP1
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BU of 5ep1 by Molmil
Quorum-Sensing Signal Integrator LuxO - Catalytic Domain
Descriptor: ACETATE ION, Putative repressor protein luxO
Authors:Shah, T, Selcuk, H.B, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-11-11
Release date:2016-04-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure, Regulation, and Inhibition of the Quorum-Sensing Signal Integrator LuxO.
Plos Biol., 14, 2016
5EP4
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Structure, Regulation, and Inhibition of the Quorum-Sensing Signal Integrator LuxO
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Shah, T, Selcuk, H.B, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-11-11
Release date:2016-04-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure, Regulation, and Inhibition of the Quorum-Sensing Signal Integrator LuxO.
Plos Biol., 14, 2016
5EP3
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Quorum-Sensing Signal Integrator LuxO - Catalytic Domain Bound to CV-133 Inhibitor
Descriptor: 1,2-ETHANEDIOL, 2,2-dimethylpropyl 2-[(3-oxidanylidene-5-sulfanylidene-2~{H}-1,2,4-triazin-6-yl)amino]ethanoate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Shah, T, Selcuk, H.B, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-11-11
Release date:2016-04-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure, Regulation, and Inhibition of the Quorum-Sensing Signal Integrator LuxO.
Plos Biol., 14, 2016

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