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PDB: 135 results

2PKG
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BU of 2pkg by Molmil
Structure of a complex between the A subunit of protein phosphatase 2A and the small t antigen of SV40
Descriptor: Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform, Small T antigen, ZINC ION
Authors:Jeffrey, P.D, Shi, Y.
Deposit date:2007-04-17
Release date:2007-05-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and biochemical insights into the regulation of protein phosphatase 2A by small t antigen of SV40.
Nat.Struct.Mol.Biol., 14, 2007
1IBG
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BU of 1ibg by Molmil
STRUCTURE AND SPECIFICITY OF THE ANTI-DIGOXIN ANTIBODY 40-50
Descriptor: COPPER (II) ION, IGG2B-KAPPA 40-50 FAB (HEAVY CHAIN), IGG2B-KAPPA 40-50 FAB (LIGHT CHAIN), ...
Authors:Jeffrey, P.D, Sheriff, S.
Deposit date:1994-10-25
Release date:1995-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and Specificity of the Anti-Digoxin Antibody 40-50
J.Mol.Biol., 248, 1995
7KGX
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BU of 7kgx by Molmil
Structure of PQS Response Protein PqsE in Complex with 4-(3-(2-methyl-2-morpholinobutyl)ureido)-N-(thiazol-2-yl)benzamide
Descriptor: 2-aminobenzoylacetyl-CoA thioesterase, 4-({[(2R)-2-methyl-2-(morpholin-4-yl)butyl]carbamoyl}amino)-N-(1,3-thiazol-2-yl)benzamide, FE (III) ION
Authors:Jeffrey, P.D, Taylor, I.R, Bassler, B.L.
Deposit date:2020-10-19
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibitor Mimetic Mutations in the Pseudomonas aeruginosa PqsE Enzyme Reveal a Protein-Protein Interaction with the Quorum-Sensing Receptor RhlR That Is Vital for Virulence Factor Production.
Acs Chem.Biol., 16, 2021
7KGW
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BU of 7kgw by Molmil
Structure of PQS Response Protein PqsE in Complex N-(3-(1H-pyrazol-5-yl)phenyl)-1H-indazole-7-carboxamide
Descriptor: 2-aminobenzoylacetyl-CoA thioesterase, FE (III) ION, N-[3-(1H-pyrazol-3-yl)phenyl]-1H-indazole-7-carboxamide
Authors:Jeffrey, P.D, Taylor, I.R, Bassler, B.L.
Deposit date:2020-10-19
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Inhibitor Mimetic Mutations in the Pseudomonas aeruginosa PqsE Enzyme Reveal a Protein-Protein Interaction with the Quorum-Sensing Receptor RhlR That Is Vital for Virulence Factor Production.
Acs Chem.Biol., 16, 2021
1IGJ
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BU of 1igj by Molmil
26-10 FAB:DIGOXIN COMPLEX-AFFINITY AND SPECIFICITY DUE TO SURFACE COMPLEMENTARITY
Descriptor: DIGOXIN, IGG2A-KAPPA 26-10 FAB (HEAVY CHAIN), IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN)
Authors:Jeffrey, P.D, Sheriff, S.
Deposit date:1993-02-19
Release date:1993-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:26-10 Fab-digoxin complex: affinity and specificity due to surface complementarity.
Proc.Natl.Acad.Sci.USA, 90, 1993
1IGI
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BU of 1igi by Molmil
26-10 FAB:DIGOXIN COMPLEX-AFFINITY AND SPECIFICITY DUE TO SURFACE COMPLEMENTARITY
Descriptor: IGG2A-KAPPA 26-10 FAB (HEAVY CHAIN), IGG2A-KAPPA 26-10 FAB (LIGHT CHAIN)
Authors:Jeffrey, P.D, Sheriff, S.
Deposit date:1993-02-19
Release date:1993-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:26-10 Fab-digoxin complex: affinity and specificity due to surface complementarity.
Proc.Natl.Acad.Sci.USA, 90, 1993
3K7W
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BU of 3k7w by Molmil
Protein phosphatase 2A core complex bound to dinophysistoxin-2
Descriptor: (2R)-2-hydroxy-3-[(2S,5R,6R,8S)-5-hydroxy-8-{(1R,2E)-3-[(2R,4a'R,5R,6'S,8'R,8a'S)-8'-hydroxy-6'-{(1S,3S)-1-hydroxy-3-[( 2S,6R,11S)-11-methyl-1,7-dioxaspiro[5.5]undec-2-yl]butyl}-7'-methylideneoctahydro-3H,3'H-spiro[furan-2,2'-pyrano[3,2-b]p yran]-5-yl]-1-methylprop-2-en-1-yl}-10-methyl-1,7-dioxaspiro[5.5]undec-10-en-2-yl]-2-methylpropanoic acid, MANGANESE (II) ION, SULFATE ION, ...
Authors:Jeffrey, P.D, Huhn, J, Shi, Y.
Deposit date:2009-10-13
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:A structural basis for the reduced toxicity of dinophysistoxin-2.
Chem.Res.Toxicol., 22, 2009
3K7V
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BU of 3k7v by Molmil
Protein phosphatase 2A core complex bound to dinophysistoxin-1
Descriptor: (2R)-3-[(2S,5R,6R,8S)-8-{(1R,2E)-3-[(2R,4a'R,5R,6'S,8'R,8a'S)-6'-{(1S,3S)-3-[(2S,3R,6R,11R)-3,11-dimethyl-1,7-dioxaspiro[5.5]undec-2-yl]-1-hydroxybutyl}-8'-hydroxy-7'-methylideneoctahydro-3H,3'H-spiro[furan-2,2'-pyrano[3,2-b]pyran]-5-yl]-1-methylprop-2-en-1-yl}-5-hydroxy-10-methyl-1,7-dioxaspiro[5.5]undec-10-en-2-yl]-2-hydroxy-2-methylpropanoic acid, MANGANESE (II) ION, SULFATE ION, ...
Authors:Jeffrey, P.D, Huhn, J, Shi, Y.
Deposit date:2009-10-13
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A structural basis for the reduced toxicity of dinophysistoxin-2.
Chem.Res.Toxicol., 22, 2009
8VCN
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BU of 8vcn by Molmil
GluER mutant - W66F F269Y Q293T F68Y T36E P263L
Descriptor: ACETATE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Jeffrey, P.D, Sorigue, D.R, Liu, Y, Hyster, T.K.
Deposit date:2023-12-14
Release date:2024-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Asymmetric Synthesis of alpha-Chloroamides via Photoenzymatic Hydroalkylation of Olefins.
J.Am.Chem.Soc., 146, 2024
3H11
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BU of 3h11 by Molmil
Zymogen caspase-8:c-FLIPL protease domain complex
Descriptor: CASP8 and FADD-like apoptosis regulator, Caspase-8, IETD aldehyde inhibitor
Authors:Jeffrey, P.D, Yu, J.W, Shi, Y.
Deposit date:2009-04-10
Release date:2009-04-28
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of procaspase-8 activation by c-FLIPL.
Proc.Natl.Acad.Sci.USA, 106, 2009
3H4P
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BU of 3h4p by Molmil
Proteasome 20S core particle from Methanocaldococcus jannaschii
Descriptor: Proteasome subunit alpha, Proteasome subunit beta
Authors:Jeffrey, P.D, Zhang, F, Hu, M, Tian, G, Zhang, P, Finley, D, Shi, Y.
Deposit date:2009-04-20
Release date:2009-06-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structural Insights into the Regulatory Particle of the Proteasome from Methanocaldococcus jannaschii.
Mol.Cell, 34, 2009
3H13
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BU of 3h13 by Molmil
c-FLIPL protease-like domain
Descriptor: CASP8 and FADD-like apoptosis regulator
Authors:Jeffrey, P.D, Yu, J.W, Shi, Y.
Deposit date:2009-04-10
Release date:2009-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of procaspase-8 activation by c-FLIPL.
Proc.Natl.Acad.Sci.USA, 106, 2009
3H43
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BU of 3h43 by Molmil
N-terminal domain of the proteasome-activating nucleotidase of Methanocaldococcus jannaschii
Descriptor: Proteasome-activating nucleotidase
Authors:Jeffrey, P.D, Zhang, F, Hu, M, Tian, G, Zhang, P, Finley, D, Shi, Y.
Deposit date:2009-04-17
Release date:2009-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into the Regulatory Particle of the Proteasome from Methanocaldococcus jannaschii.
Mol.Cell, 34, 2009
1MJE
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BU of 1mje by Molmil
STRUCTURE OF A BRCA2-DSS1-SSDNA COMPLEX
Descriptor: 5'-D(P*TP*TP*TP*TP*TP*T)-3', Deleted in split hand/split foot protein 1, breast cancer 2
Authors:Yang, H, Jeffrey, P.D, Miller, J, Kinnucan, E, Sun, Y, Thoma, N.H, Zheng, N, Chen, P.L, Lee, W.H, Pavletich, N.P.
Deposit date:2002-08-27
Release date:2002-09-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:BRCA2 function in DNA binding and recombination from a BRCA2-DSS1-ssDNA structure.
Science, 297, 2002
6E52
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BU of 6e52 by Molmil
Chimeric structure of Saccharomyces cerevisiae GCN4 leucine zipper fused to Staphylococcus aureus AgrC cytoplasmic histidine kinase module (dataset anisotropically truncated by STARANISO)
Descriptor: Staphylococcus aureus AgrC histidine kinase module fused to Saccharomyces cerevisiae GCN4 leucine zipper
Authors:Xie, Q, Jeffrey, P.D, Muir, T.W.
Deposit date:2018-07-19
Release date:2019-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Identification of a Molecular Latch that Regulates Staphylococcal Virulence.
Cell Chem Biol, 26, 2019
7N29
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BU of 7n29 by Molmil
Structure of NAD kinase
Descriptor: NAD kinase 2, mitochondrial, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Du, J, Estrella, M.A, Jeffrey, P.D, Korennykh, A.V.
Deposit date:2021-05-28
Release date:2022-05-04
Last modified:2022-06-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of human NADK2 reveals atypical assembly and regulation of NAD kinases from animal mitochondria.
Proc.Natl.Acad.Sci.USA, 119, 2022
3CEV
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BU of 3cev by Molmil
ARGINASE FROM BACILLUS CALDEVELOX, COMPLEXED WITH L-ARGININE
Descriptor: ARGININE, MANGANESE (II) ION, PROTEIN (ARGINASE)
Authors:Bewley, M.C, Jeffrey, P.D, Patchett, M.L, Kanyo, Z.F, Baker, E.N.
Deposit date:1999-03-15
Release date:1999-04-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily.
Structure Fold.Des., 7, 1999
4U6U
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BU of 4u6u by Molmil
Crystal Structure of the Cog5-Cog7 complex from Kluyveromyces lactis
Descriptor: Cog5, Cog7
Authors:Ha, J.Y, Jeffrey, P.D, Hughson, F.M.
Deposit date:2014-07-29
Release date:2014-10-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cog5-Cog7 crystal structure reveals interactions essential for the function of a multisubunit tethering complex.
Proc.Natl.Acad.Sci.USA, 111, 2014
6PRK
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BU of 6prk by Molmil
X-ray Crystal Structure of Bacillus subtilis RicA in complex with RicF
Descriptor: RicA, RicF
Authors:Khaja, F.T, Jeffrey, P.D, Neiditch, M.B, Dubnau, D.
Deposit date:2019-07-10
Release date:2019-10-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure-Function Studies of the Bacillus subtilis Ric Proteins Identify the Fe-S Cluster-Ligating Residues and Their Roles in Development and RNA Processing.
Mbio, 10, 2019
4CEV
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BU of 4cev by Molmil
ARGINASE FROM BACILLUS CALDEVELOX, L-ORNITHINE COMPLEX
Descriptor: GUANIDINE, L-ornithine, MANGANESE (II) ION, ...
Authors:Bewley, M.C, Jeffrey, P.D, Patchett, M.L, Kanyo, Z.F, Baker, E.N.
Deposit date:1999-03-15
Release date:1999-04-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of Bacillus caldovelox arginase in complex with substrate and inhibitors reveal new insights into activation, inhibition and catalysis in the arginase superfamily.
Structure Fold.Des., 7, 1999
6E95
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BU of 6e95 by Molmil
Chimeric structure of Saccharomyces cerevisiae GCN4 leucine zipper fused to Staphylococcus aureus AgrC cytoplasmic histidine kinase module (dataset isotropically truncated by HKL2000)
Descriptor: Staphylococcus aureus AgrC histidine kinase module fused to Saccharomyces cerevisiae GCN4 leucine zipper
Authors:Xie, Q, Jeffrey, P.D, Muir, T.W.
Deposit date:2018-07-31
Release date:2019-02-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of a Molecular Latch that Regulates Staphylococcal Virulence.
Cell Chem Biol, 26, 2019
5BV0
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BU of 5bv0 by Molmil
Crystal Structure of a Complex Between the SNARE Nyv1 and the HOPS Vps33-Vps16 subcomplex from Chaetomium thermophilum
Descriptor: SM (Sec1/Munc18-like) protein, SNARE domain, Vps16
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-06-04
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
5BUZ
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BU of 5buz by Molmil
Crystal Structure of a Complex Between the SNARE Vam3 and the HOPS Vps33-Vps16 subcomplex from Chaetomium thermophilum
Descriptor: Putative vacuolar protein sorting-associated protein, SM (Sec1/Munc18-like) protein, SNAP receptor-like protein
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-06-04
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
5BV1
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BU of 5bv1 by Molmil
Crystal Structure of a Vps33-Vps16 Complex from Chaetomium thermophilum
Descriptor: D-MALATE, Putative vacuolar protein sorting-associated protein, VPS33
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2015-06-04
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:A direct role for the Sec1/Munc18-family protein Vps33 as a template for SNARE assembly.
Science, 349, 2015
4JC8
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BU of 4jc8 by Molmil
Crystal Structure of HOPS component Vps33 from Chaetomium thermophilum
Descriptor: HOPS component Vps33
Authors:Baker, R.W, Jeffrey, P.D, Hughson, F.M.
Deposit date:2013-02-21
Release date:2013-05-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of the Sec1/Munc18 (SM) Protein Vps33, Alone and Bound to the Homotypic Fusion and Vacuolar Protein Sorting (HOPS) Subunit Vps16*
Plos One, 8, 2013

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