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PDB: 3278 件

7TVP
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Viral AMG chitosanase V-Csn, E157Q mutant, chitotriose complex
分子名称: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, GLYCEROL, Viral chitosanase V-Csn E157Q mutant chitotriose complex
著者Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
登録日2022-02-05
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
7TVM
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Viral AMG chitosanase V-Csn, apo structure, crystal form 2
分子名称: 1,2-ETHANEDIOL, Viral chitosanase V-Csn
著者Smith, C.A, Wu, R, Buchko, G.W, Cort, J.R, Hofmockel, K.S, Jansson, J.K.
登録日2022-02-05
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural characterization of a soil viral auxiliary metabolic gene product - a functional chitosanase.
Nat Commun, 13, 2022
7TZ1
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Crystal Structure of a Mycobacteriophage Cluster A2 Immunity Repressor:DNA Complex
分子名称: DNA (5'-D(P*CP*CP*CP*GP*CP*TP*TP*GP*AP*CP*AP*GP*CP*CP*AP*CP*CP*GP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*CP*GP*GP*TP*GP*GP*CP*TP*GP*TP*CP*AP*AP*GP*CP*GP*GP*G)-3'), Immunity repressor
著者McGinnis, R.J, Brambley, C.A, Stamey, B, Green, W.C, Gragg, K.N, Cafferty, E.R, Terwilliger, T.C, Hammel, M, Hollis, T.J, Miller, J.M, Gainey, M.D, Wallen, J.R.
登録日2022-02-15
公開日2022-07-20
最終更新日2022-07-27
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence.
Nat Commun, 13, 2022
1BLQ
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STRUCTURE AND INTERACTION SITE OF THE REGULATORY DOMAIN OF TROPONIN-C WHEN COMPLEXED WITH THE 96-148 REGION OF TROPONIN-I, NMR, 29 STRUCTURES
分子名称: N-TROPONIN C
著者Mckay, R.T, Pearlstone, J.R, Corson, D.C, Gagne, S.M, Smillie, L.B, Sykes, B.D.
登録日1998-07-19
公開日1999-01-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure and interaction site of the regulatory domain of troponin-C when complexed with the 96-148 region of troponin-I.
Biochemistry, 37, 1998
1BKM
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COCRYSTAL STRUCTURE OF D-AMINO ACID SUBSTITUTED PHOSPHOPEPTIDE COMPLEX
分子名称: PP60 V-SRC TYROSINE KINASE TRANSFORMING PROTEIN, [[O-PHOSPHONO-N-ACETYL-TYROSINYL]-GLUTAMYL-3[CYCLOHEXYLMETHYL]ALANINYL]-AMINE
著者Holland, D.R, Rubin, J.R.
登録日1997-05-02
公開日1997-07-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-Based Design of a Novel Series of Nonpeptide Ligands that Bind to the Pp60Src Sh2 Domain
J.Am.Chem.Soc., 119, 1997
2J98
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Human coronavirus 229E non structural protein 9 cys69ala mutant (Nsp9)
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, REPLICASE POLYPROTEIN 1AB
著者Ponnusamy, R, Mesters, J.R, Moll, R, Hilgenfeld, R.
登録日2006-11-03
公開日2007-11-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Variable Oligomerization Modes in Coronavirus Non-Structural Protein 9.
J.Mol.Biol., 383, 2008
2J97
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Human coronavirus 229E non structural protein 9 (Nsp9)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, REPLICASE POLYPROTEIN 1AB, SULFATE ION
著者Ponnusamy, R, Mesters, J.R, Moll, R, Hilgenfeld, R.
登録日2006-11-03
公開日2007-11-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Variable Oligomerization Modes in Coronavirus Non-Structural Protein 9.
J.Mol.Biol., 383, 2008
3S1I
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Crystal structure of oxygen-bound hell's gate globin I
分子名称: Hemoglobin-like flavoprotein, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Teh, A.H, Saito, J.A, Baharuddin, A, Tuckerman, J.R, Newhouse, J.S, Kanbe, M, Newhouse, E.I, Rahim, R.A, Favier, F, Didierjean, C, Sousa, E.H.S, Stott, M.B, Dunfield, P.F, Gonzalez, G, Gilles-Gonzalez, M.A, Najimudin, N, Alam, M.
登録日2011-05-15
公開日2011-09-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Hell's Gate globin I: an acid and thermostable bacterial hemoglobin resembling mammalian neuroglobin
Febs Lett., 585, 2011
3S3Z
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Crystal Structure an Tandem Cyanovirin-N Dimer, CVN2L10
分子名称: SODIUM ION, Tandem Cyanovirin-N Dimer CVN2L10
著者Keeffe, J.R, Bjorkman, P.J, Mayo, S.L.
登録日2011-05-18
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Designed oligomers of cyanovirin-N show enhanced HIV neutralization.
Proc.Natl.Acad.Sci.USA, 108, 2011
8UWU
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EmrE structure in the proton-bound state (WT/L51I heterodimer)
分子名称: SMR family multidrug efflux protein EmrE
著者Li, J, Sae Her, A, Besch, A, Ramirez, B, Crames, M, Banigan, J.R, Mueller, C, Marsiglia, W.M, Zhang, Y, Traaseth, N.J.
登録日2023-11-08
公開日2024-05-29
最終更新日2024-07-03
実験手法SOLID-STATE NMR, SOLUTION NMR
主引用文献Dynamics underlie the drug recognition mechanism by the efflux transporter EmrE.
Nat Commun, 15, 2024
2IRW
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Human 11-beta-Hydroxysteroid Dehydrogenase (HSD1) with NADP and Adamantane Ether Inhibitor
分子名称: (1S,3R,4S,5S,7S)-4-{[2-(4-METHOXYPHENOXY)-2-METHYLPROPANOYL]AMINO}ADAMANTANE-1-CARBOXAMIDE, Corticosteroid 11-beta-dehydrogenase isozyme 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Longenecker, K.L, Patel, J.R, Russell, J, Qin, W.
登録日2006-10-16
公開日2007-01-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Discovery of adamantane ethers as inhibitors of 11beta-HSD-1: Synthesis and biological evaluation.
Bioorg.Med.Chem.Lett., 17, 2007
2L8Q
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Solution Structure of a control DNA Duplex
分子名称: DNA (5'-D(*CP*GP*CP*AP*TP*GP*CP*TP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*AP*GP*CP*AP*TP*GP*CP*G)-3')
著者Julien, O, Beadle, J.R, Magee, W.C, Chatterjee, S, Hostetler, K.Y, Evans, D.H, Sykes, B.D.
登録日2011-01-22
公開日2011-02-23
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of a DNA duplex containing the potent anti-poxvirus agent cidofovir.
J.Am.Chem.Soc., 133, 2011
8UVL
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Crystal structure of selective IRE1a inhibitor 29 at the enzyme active site
分子名称: 1,2-ETHANEDIOL, 1-phenyl-N-(2,3,6-trifluoro-4-{[(3M)-3-(2-{[(3R,5R)-5-fluoropiperidin-3-yl]amino}pyrimidin-4-yl)pyridin-2-yl]oxy}phenyl)methanesulfonamide, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Kiefer, J.R, Wallweber, H.A, Braun, M.-G, Wei, W, Jiang, F, Wang, W, Rudolph, J, Ashkenazi, A.
登録日2023-11-03
公開日2024-05-29
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Discovery of Potent, Selective, and Orally Available IRE1 alpha Inhibitors Demonstrating Comparable PD Modulation to IRE1 Knockdown in a Multiple Myeloma Model.
J.Med.Chem., 67, 2024
2L5N
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NMR Structure of YbbR family protein Dhaf_0833 (residues 32-118) from Desulfitobacterium hafniense DCB-2: Northeast Structural Genomics Consortium target DhR29B
分子名称: YbbR family protein
著者Cort, J.R, Barb, A.W, Lee, H, Ramelot, T.A, Yang, Y, Belote, R.L, Ciccosanti, C.R, Haleema, J, Acton, T.B, Xiao, R.R, Everett, J.K, Montelione, G.T, Prestegard, J.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2010-11-02
公開日2010-12-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of domains I and IV from YbbR are representative of a widely distributed protein family.
Protein Sci., 20, 2011
7R7P
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Immature HIV-1 CACTD-SP1 lattice with Bevirimat (BVM) and Inositol hexakisphosphate (IP6)
分子名称: 3alpha-[(3-carboxy-3-methylbutanoyl)oxy]-8alpha,9beta,10alpha,13alpha,17alpha,19beta-lup-20(29)-en-28-oic acid, Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
著者Sarkar, S, Zadrozny, K.K, Zadorozhnyi, R, Russell, R.W, Quinn, C.M, Kleinpeter, A, Ablan, S, Meshkin, H, Perilla, J.R, Ganser-Pornillos, B.K, Pornillos, O, Freed, E.O, Gronenborn, A.M, Polenova, T.
登録日2021-06-25
公開日2023-02-15
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献Structural basis of HIV-1 maturation inhibitor binding and activity.
Nat Commun, 14, 2023
7R7Q
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Immature HIV-1 CACTD-SP1 lattice with Inositol hexakisphosphate (IP6)
分子名称: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
著者Sarkar, S, Zadrozny, K.K, Zadorozhnyi, R, Russell, R.W, Quinn, C.M, Kleinpeter, A, Ablan, S, Meshkin, H, Perilla, J.R, Ganser-Pornillos, B.K, Pornillos, O, Freed, E.O, Gronenborn, A.M, Polenova, T.
登録日2021-06-25
公開日2023-02-15
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献Structural basis of HIV-1 maturation inhibitor binding and activity.
Nat Commun, 14, 2023
2FYE
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Mutant Human Cathepsin S with irreversible inhibitor CRA-14013
分子名称: N-[(1R)-1-[({[(5S)-3,5-DIMETHYL-2,5-DIHYDROISOXAZOL-4-YL]METHYL}SULFONYL)METHYL]-2-OXO-2-({(1S)-3-PHENYL-1-[2-(PHENYLSULFONYL)ETHYL]PROPYL}AMINO)ETHYL]MORPHOLINE-4-CARBOXAMIDE, cathepsin S preproprotein
著者Somoza, J.R.
登録日2006-02-07
公開日2006-08-08
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mutant Human Cathepsin S with irreversible inhibitor CRA-14013
To be Published
3ROL
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Murine class I major histocompatibility complex H-2Kb in complex with post-translationally modified LCMV-derived gp34-41 peptide, comprising a nitrotyrosine at position 3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
著者Madhurantakam, C, Duru, A.D, Leong, C, Sandalova, T, Webb, J.R, Achour, A.
登録日2011-04-26
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Nitro-tyrosination of the immunodominant LCMV epitope gp34-41 alters both its capacity to stabilize H-2Kb and the molecular surface of the MHC complex, affecting TCR recognition
PLoS ONE, 2012
3RPX
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Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
分子名称: Complement component 1 Q subcomponent-binding protein, UNKNOWN ATOM OR ION
著者Tempel, W, Tong, Y, Crombet, L, Shen, Y, Guan, X, Nedyalkova, L, Walker, J.R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Park, H, Structural Genomics Consortium (SGC)
登録日2011-04-27
公開日2011-05-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of complement component 1, q subcomponent binding protein, C1QBP
to be published
3R2D
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Crystal Structure of Antitermination Factors NusB and NusE in complex with dsRNA
分子名称: 30S ribosomal protein S10, 5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3', DI(HYDROXYETHYL)ETHER, ...
著者Stagno, J.R, Ji, X.
登録日2011-03-14
公開日2011-06-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献Structural basis for RNA recognition by NusB and NusE in the initiation of transcription antitermination.
Nucleic Acids Res., 39, 2011
2L86
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Solution NMR structure of human amylin in SDS micelles at pH 7.3
分子名称: Islet amyloid polypeptide
著者Nanga, R, Brender, J.R, Vivekanandan, S, Ramamoorthy, A.
登録日2011-01-04
公開日2011-07-13
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and membrane orientation of IAPP in its natively amidated form at physiological pH in a membrane environment.
Biochim.Biophys.Acta, 1808, 2011
2FQ9
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Cathepsin S with nitrile inhibitor
分子名称: N-(1-CYANOCYCLOPROPYL)-3-({[(2S)-5-OXOPYRROLIDIN-2-YL]METHYL}SULFONYL)-N~2~-[(1S)-2,2,2-TRIFLUORO-1-(4-FLUOROPHENYL)ETHYL]-L-ALANINAMIDE, cathepsin S
著者Somoza, J.R.
登録日2006-01-17
公開日2006-03-21
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Cathepsin S with nitrile inhibitor
To be Published
2FRA
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Human Cathepsin S with CRA-27934, a Nitrile Inhibitor
分子名称: N-[1-(AMINOMETHYL)CYCLOPROPYL]-3-(BENZYLSULFONYL)-N~2~-[(1S)-2,2,2-TRIFLUORO-1-(4-HYDROXYPHENYL)ETHYL]-L-ALANINAMIDE, cathepsin S
著者Somoza, J.R.
登録日2006-01-19
公開日2006-07-25
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Human Cathepsin S with CRA-27934, a Nitrile Inhibitor
To be Published
7LNI
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SeMet CamA Adenine Methyltransferase Complexed to Cognate Substrate DNA
分子名称: 1,2-ETHANEDIOL, DNA Strand 1, DNA Strand 2, ...
著者Horton, J.R, Cheng, X, Zhou, J.
登録日2021-02-07
公開日2021-05-19
最終更新日2021-07-14
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Clostridioides difficile specific DNA adenine methyltransferase CamA squeezes and flips adenine out of DNA helix.
Nat Commun, 12, 2021
2FVT
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NMR Structure of the Rpa2829 protein from Rhodopseudomonas palustris: Northeast Structural Genomics Target RpR43
分子名称: conserved hypothetical protein
著者Cort, J.R, Ho, C.K, Cunningham, K, Ma, L.C, Conover, K, Xiao, R, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2006-01-31
公開日2006-02-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR Structure of the Rpa2829 protein from Rhodopseudomonas palustris
To be Published

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