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PDB: 5623 件
1ECG
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DON INACTIVATED ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE
分子名称: 5-OXO-L-NORLEUCINE, GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID)
著者Krahn, J.M.
登録日1996-04-23
公開日1996-11-08
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and function of the glutamine phosphoribosylpyrophosphate amidotransferase glutamine site and communication with the phosphoribosylpyrophosphate site.
J.Biol.Chem., 271, 1996
1ECC
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BU of 1ecc by Molmil
ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH MN-CPRPP AND 5-OXO-NORLEUCINE
分子名称: 1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE, 5-OXO-L-NORLEUCINE, GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, ...
著者Krahn, J.M, Smith, J.L.
登録日1997-07-09
公開日1998-04-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Coupled formation of an amidotransferase interdomain ammonia channel and a phosphoribosyltransferase active site.
Biochemistry, 36, 1997
1ECB
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BU of 1ecb by Molmil
ESCHERICHIA COLI GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE (PRPP) AMIDOTRANSFERASE COMPLEXED WITH 2 GMP, 1 MG PER SUBUNIT
分子名称: GLUTAMINE PHOSPHORIBOSYLPYROPHOSPHATE AMIDOTRANSFERASE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION
著者Krahn, J.M, Smith, J.L.
登録日1997-07-15
公開日1998-04-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Coupled formation of an amidotransferase interdomain ammonia channel and a phosphoribosyltransferase active site.
Biochemistry, 36, 1997
6U7H
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BU of 6u7h by Molmil
Cryo-EM structure of the HCoV-229E spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Li, Z, Benlekbir, S, Rubinstein, J.L, Rini, J.M.
登録日2019-09-02
公開日2019-11-13
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
6UE0
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BU of 6ue0 by Molmil
Crystal structure of dihydrodipicolinate synthase from Klebsiella pneumoniae bound to pyruvate
分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, SULFATE ION
著者Impey, R.E, Lee, M, Hawkins, D.A, Sutton, J.M, Panjikar, S, Perugini, M.A, Soares da Costa, T.P.
登録日2019-09-20
公開日2020-02-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.892 Å)
主引用文献Mis-annotations of a promising antibiotic target in high-priority gram-negative pathogens.
Febs Lett., 594, 2020
6U0X
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BU of 6u0x by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS Q123D at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Jeliazkov, J.R, Robinson, A.C, Berger, J.M, Garcia-Moreno E, B, Gray, J.G.
登録日2019-08-15
公開日2019-08-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Toward the computational design of protein crystals with improved resolution.
Acta Crystallogr D Struct Biol, 75, 2019
6U1V
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BU of 6u1v by Molmil
Crystal structure of acyl-ACP/acyl-CoA dehydrogenase from allylmalonyl-CoA and FK506 biosynthesis, TcsD
分子名称: Acyl-CoA dehydrogenase domain-containing protein, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
著者Blake-Hedges, J.M, Pereira, J.H, Barajas, J.F, Adams, P.D, Keasling, J.D.
登録日2019-08-16
公開日2019-12-18
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Mechanism of Regioselectivity in an Unusual Bacterial Acyl-CoA Dehydrogenase.
J.Am.Chem.Soc., 142, 2020
6U7E
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BU of 6u7e by Molmil
HCoV-229E RBD Class III in complex with human APN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
著者Tomlinson, A.C.A, Li, Z, Rini, J.M.
登録日2019-09-02
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
6U8E
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Human IMPDH2 treated with ATP, IMP, and NAD+. Filament assembly interface reconstruction.
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Johnson, M.C, Kollman, J.M.
登録日2019-09-04
公開日2020-03-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UDQ
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BU of 6udq by Molmil
Human IMPDH2 treated with ATP, IMP, and 20 mM GTP. Fully compressed filament end reconstruction.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
著者Johnson, M.C, Kollman, J.M.
登録日2019-09-19
公開日2020-03-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6UDO
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BU of 6udo by Molmil
Human IMPDH2 treated with ATP, IMP, and 20 mM GTP. Fully compressed filament segment reconstruction.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
著者Johnson, M.C, Kollman, J.M.
登録日2019-09-19
公開日2020-03-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
6ULU
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BU of 6ulu by Molmil
D104A/S128A S. typhimurium siroheme synthase
分子名称: CHLORIDE ION, S-ADENOSYL-L-HOMOCYSTEINE, Siroheme synthase
著者Pennington, J.M, Stroupe, M.E.
登録日2019-10-08
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Siroheme synthase orients substrates for dehydrogenase and chelatase activities in a common active site.
Nat Commun, 11, 2020
1F21
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BU of 1f21 by Molmil
DIVALENT METAL COFACTOR BINDING IN THE KINETIC FOLDING TRAJECTORY OF E. COLI RIBONUCLEASE HI
分子名称: RIBONUCLEASE HI
著者Goedken, E.R, Keck, J.L, Berger, J.M, Marqusee, S.
登録日2000-05-22
公開日2000-12-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Divalent metal cofactor binding in the kinetic folding trajectory of Escherichia coli ribonuclease HI.
Protein Sci., 9, 2000
5IEA
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BU of 5iea by Molmil
TRIM5 B-box2 and coiled-coil chimera
分子名称: Tripartite motif-containing protein 5, Serine--tRNA ligase Chimera, ZINC ION
著者Wagner, J.M, Doss, G, Pornillos, O.
登録日2016-02-25
公開日2016-06-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.258 Å)
主引用文献Mechanism of B-box 2 domain-mediated higher-order assembly of the retroviral restriction factor TRIM5 alpha.
Elife, 5, 2016
6AFP
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BU of 6afp by Molmil
Crystal structure of class A b-lactamase, PenL, variant Asn136Asp, from Burkholderia thailandensis, in complex with ceftazidime-like boronic acid
分子名称: ACETATE ION, Beta-lactamase, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE
著者Cao, T.-P, Choi, J.M, Lee, S.H.
登録日2018-08-08
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.398 Å)
主引用文献Non-catalytic-Region Mutations Conferring Transition of Class A beta-Lactamases Into ESBLs.
Front Mol Biosci, 2020
6UDP
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BU of 6udp by Molmil
Human IMPDH2 treated with ATP, IMP, and 20 mM GTP. Filament assembly interface reconstruction.
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2
著者Johnson, M.C, Kollman, J.M.
登録日2019-09-19
公開日2020-03-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020
5I4T
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BU of 5i4t by Molmil
Immature hexagonal lattice of HIV-1 Gag
分子名称: CTD-SP1 fragment of HIV-1 Gag
著者Pornillos, O, Wagner, J.M, Zadrozny, K, Ganser-Pornillos, B.K.
登録日2016-02-12
公開日2016-07-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.273 Å)
主引用文献Crystal structure of an HIV assembly and maturation switch.
Elife, 5, 2016
5ISC
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BU of 5isc by Molmil
Crystal structure of mouse CARM1 in complex with inhibitor SA0491
分子名称: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 1-METHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
著者Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
登録日2016-03-15
公開日2017-03-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of mouse CARM1 in complex with inhibitor SA0491
To Be Published
1F5W
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BU of 1f5w by Molmil
DIMERIC STRUCTURE OF THE COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR D1 DOMAIN
分子名称: COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR, SULFATE ION
著者van Raaij, M.J, Chouin, E, van der Zandt, H, Bergelson, J.M, Cusack, S.
登録日2000-06-18
公開日2000-11-08
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dimeric structure of the coxsackievirus and adenovirus receptor D1 domain at 1.7 A resolution.
Structure Fold.Des., 8, 2000
1F69
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CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*GP*CP*C)-3'), MAGNESIUM ION
著者Vargason, J.M, Eichman, B.F, Ho, P.S.
登録日2000-06-20
公開日2000-08-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1F6C
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BU of 1f6c by Molmil
CRYSTAL STRUCTURE OF THE B-DNA HEXAMER GGCGCC WITH SPERMINE
分子名称: DNA (5'-D(*GP*GP*CP*GP*CP*C)-3'), SPERMINE
著者Vargason, J.M, Eichman, B.F, Ho, P.S.
登録日2000-06-21
公開日2000-08-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1F6E
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CRYSTAL STRUCTURE OF THE A-DNA HEXAMER GGCGM5CC
分子名称: DNA (5'-D(*GP*GP*CP*GP*(5CM)P*C)-3')
著者Vargason, J.M, Eichman, B.F, Ho, P.S.
登録日2000-06-21
公開日2000-08-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1F6I
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CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGM5CC
分子名称: DNA (5'-D(*GP*GP*CP*GP*(5CM)P*C)-3')
著者Vargason, J.M, Eichman, B.F, Ho, P.S.
登録日2000-06-21
公開日2000-08-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
1F6J
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BU of 1f6j by Molmil
CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGBR5CC
分子名称: DNA (5'-D(*GP*GP*CP*GP*(CBR)P*C)-3')
著者Vargason, J.M, Eichman, B.F, Ho, P.S.
登録日2000-06-21
公開日2000-08-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献The extended and eccentric E-DNA structure induced by cytosine methylation or bromination.
Nat.Struct.Biol., 7, 2000
6UA4
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BU of 6ua4 by Molmil
Human IMPDH2 treated with ATP, IMP, NAD+, and 2 mM GTP. Bent (3/4 compressed, 1/4 extended) segment reconstruction.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ...
著者Johnson, M.C, Kollman, J.M.
登録日2019-09-10
公開日2020-03-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.65 Å)
主引用文献Cryo-EM structures demonstrate human IMPDH2 filament assembly tunes allosteric regulation.
Elife, 9, 2020

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