Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5587 件

6CCH
DownloadVisualize
BU of 6cch by Molmil
NMR data-driven model of GTPase KRas-GMPPNP tethered to a nanodisc (E3 state)
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ...
著者Fang, Z, Marshall, C.B, Nishikawa, T, Gossert, A.D, Jansen, J.M, Jahnke, W, Ikura, M.
登録日2018-02-07
公開日2018-08-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Inhibition of K-RAS4B by a Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site.
Cell Chem Biol, 25, 2018
1L2M
DownloadVisualize
BU of 1l2m by Molmil
Minimized Average Structure of the N-terminal, DNA-binding domain of the replication initiation protein from a geminivirus (Tomato yellow leaf curl virus-Sardinia)
分子名称: Rep protein
著者Campos-Olivas, R, Louis, J.M, Clerot, D, Gronenborn, B, Gronenborn, A.M.
登録日2002-02-22
公開日2002-09-18
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of a replication initiator unites diverse aspects of nucleic acid metabolism
Proc.Natl.Acad.Sci.USA, 99, 2002
1L3L
DownloadVisualize
BU of 1l3l by Molmil
Crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA
分子名称: 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE, 5'-D(*GP*AP*TP*GP*TP*GP*CP*AP*GP*AP*TP*CP*TP*GP*CP*AP*CP*AP*TP*C)-3', Transcriptional activator protein traR
著者Zhang, R, Pappas, T, Brace, J.L, Miller, P.C, Oulmassov, T, Molyneaux, J.M, Anderson, J.C, Bashkin, J.K, Winans, S.C, Joachimiak, A.
登録日2002-02-27
公開日2002-07-03
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structure of a bacterial quorum-sensing transcription factor complexed with pheromone and DNA.
Nature, 417, 2002
1L5E
DownloadVisualize
BU of 1l5e by Molmil
The domain-swapped dimer of CV-N in solution
分子名称: Cyanovirin-N
著者Barrientos, L.G, Louis, J.M, Botos, I, Mori, T, Han, Z, O'Keefe, B.R, Boyd, M.R, Wlodawer, A, Gronenborn, A.M.
登録日2002-03-06
公開日2002-06-05
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献The domain-swapped dimer of cyanovirin-N is in a metastable folded state: reconciliation of X-ray and NMR structures.
Structure, 10, 2002
6BU6
DownloadVisualize
BU of 6bu6 by Molmil
Crystal Structure of the Human vaccinia-related kinase bound to a bis-difluorophenol-aminopyridine inhibitor
分子名称: 4,4'-(2-aminopyridine-3,5-diyl)bis(2,6-difluorophenol), CHLORIDE ION, GLYCEROL, ...
著者Counago, R.M, dos Reis, C.V, de Souza, G.P, Santiago, A.S, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2017-12-08
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Human vaccinia-related kinase bound to a bis-difluorophenol-aminopyridine inhibitor
To Be Published
2OLP
DownloadVisualize
BU of 2olp by Molmil
Structure and ligand selection of hemoglobin II from Lucina pectinata
分子名称: Hemoglobin II, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Gavira, J.A, Camara-Artigas, A, de Jesus, W, Lopez-Garriga, J, Garcia-Ruiz, J.M.
登録日2007-01-19
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.932 Å)
主引用文献Structure and Ligand Selection of Hemoglobin II from Lucina pectinata
J.Biol.Chem., 283, 2008
1LF7
DownloadVisualize
BU of 1lf7 by Molmil
Crystal Structure of Human Complement Protein C8gamma at 1.2 A Resolution
分子名称: CITRIC ACID, Complement Protein C8gamma
著者Ortlund, E, Parker, C.L, Schreck, S.F, Ginell, S, Minor, W, Sodetz, J.M, Lebioda, L.
登録日2002-04-10
公開日2002-06-12
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of human complement protein C8gamma at 1.2 A resolution reveals a lipocalin fold and a distinct ligand binding site.
Biochemistry, 41, 2002
1K4F
DownloadVisualize
BU of 1k4f by Molmil
CRYSTAL STRUCTURE OF THE CLASS D BETA-LACTAMASE OXA-10 AT 1.6 A RESOLUTION
分子名称: Beta-lactamase PSE-2, SULFATE ION
著者Kerff, F, Fonze, E, Bouillene, F, Frere, J.M, Charlier, P.
登録日2001-10-08
公開日2001-10-31
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the class D beta-lactamase OXA-2
To be Published
6BNZ
DownloadVisualize
BU of 6bnz by Molmil
Crystal structure of E144Q-glyoxalase I mutant from Zea mays in space group P4(1)2(1)2
分子名称: COBALT (II) ION, FORMIC ACID, GLUTATHIONE, ...
著者Alvarez, C.E, Agostini, R.B, Gonzalez, J.M, Drincovich, M.F, Campos Bermudez, V.A, Klinke, S.
登録日2017-11-17
公開日2018-11-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Deciphering the number and location of active sites in the monomeric glyoxalase I of Zea mays.
Febs J., 286, 2019
1K64
DownloadVisualize
BU of 1k64 by Molmil
NMR Structue of alpha-conotoxin EI
分子名称: alpha-conotoxin EI
著者Park, K.H, Suk, J.E, Jacobsen, R, Gray, W.R, McIntosh, J.M, Han, K.H.
登録日2001-10-15
公開日2003-09-09
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution conformation of alpha-conotoxin EI, a neuromuscular toxin specific for the alpha 1/delta subunit interface of torpedo nicotinic acetylcholine receptor
J.BIOL.CHEM., 276, 2001
6BPZ
DownloadVisualize
BU of 6bpz by Molmil
Structure of the mechanically activated ion channel Piezo1
分子名称: Piezo-type mechanosensitive ion channel component 1,Piezo-type mechanosensitive ion channel component 1,mouse Piezo1,Piezo-type mechanosensitive ion channel component 1,Piezo-type mechanosensitive ion channel component 1
著者Saotome, K, Kefauver, J.M, Patapoutian, A, Ward, A.B.
登録日2017-11-27
公開日2017-12-27
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the mechanically activated ion channel Piezo1.
Nature, 554, 2018
6BKU
DownloadVisualize
BU of 6bku by Molmil
Crystal Structure of the Human CAMKK2B bound to GSK650394
分子名称: 2-cyclopentyl-4-(5-phenyl-1H-pyrrolo[2,3-b]pyridin-3-yl)benzoic acid, Calcium/calmodulin-dependent protein kinase kinase 2, FORMIC ACID
著者Counago, R.M, dos Reis, C.V, de Souza, G.P, Ramos, P.Z, Drewry, D, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2017-11-09
公開日2017-11-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Human CAMKK2B bound to GSK650394
To Be Published
6BRC
DownloadVisualize
BU of 6brc by Molmil
Crystal Structure of the Human CAMKK2B in complex with AP26113-analog (ALK-IN-1)
分子名称: 5-chloro-N~2~-{4-[4-(dimethylamino)piperidin-1-yl]-2-methoxyphenyl}-N~4~-[2-(dimethylphosphoryl)phenyl]pyrimidine-2,4-diamine, Calcium/calmodulin-dependent protein kinase kinase 2, SODIUM ION
著者Counago, R.M, dos Reis, C.V, de Souza, G.P, Ramos, P.Z, Drewry, D, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2017-11-30
公開日2017-12-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the Human CAMKK2B in complex with AP26113-analog (ALK-IN-1)
To Be Published
6BRU
DownloadVisualize
BU of 6bru by Molmil
Crystal Structure of the Human vaccinia-related kinase bound to a (S)-2-phenylaminopteridinone inhibitor
分子名称: (7S)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-5,7,8-trimethyl-7,8-dihydropteridin-6(5H)-one, 1,2-ETHANEDIOL, SULFATE ION, ...
著者Counago, R.M, dos Reis, C.V, de Souza, G.P, Aquino, B, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2017-12-01
公開日2017-12-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Human vaccinia-related kinase bound to a (S)-2-phenylaminopteridinone inhibitor
To Be Published
6AX7
DownloadVisualize
BU of 6ax7 by Molmil
The crystal structure of a lysyl hydroxylase from Acanthamoeba polyphaga mimivirus
分子名称: FE (II) ION, Procollagen lysyl hydroxylase and glycosyltransferase
著者Guo, H, Tsai, C, Miller, M.D, Alvarado, S, Tainer, J.A, Phillips Jr, G.N, Kurie, J.M.
登録日2017-09-06
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Pro-metastatic collagen lysyl hydroxylase dimer assemblies stabilized by Fe2+-binding.
Nat Commun, 9, 2018
1KAC
DownloadVisualize
BU of 1kac by Molmil
KNOB DOMAIN FROM ADENOVIRUS SEROTYPE 12 IN COMPLEX WITH DOMAIN 1 OF ITS CELLULAR RECEPTOR CAR
分子名称: PROTEIN (COXSACKIE VIRUS AND ADENOVIRUS RECEPTOR), PROTEIN (FIBER KNOB PROTEIN)
著者Bewley, M.C, Springer, K, Zhang, Y.B, Freimuth, P, Flanagan, J.M.
登録日1999-05-05
公開日1999-11-24
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural analysis of the mechanism of adenovirus binding to its human cellular receptor, CAR.
Science, 286, 1999
6D91
DownloadVisualize
BU of 6d91 by Molmil
Crystal structure of the Deinococcus radiodurans Nramp/MntH divalent transition metal transporter in the outward-open, apo conformation
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Divalent metal cation transporter MntH
著者Bozzi, A.T, Zimanyi, C.M, Nicoludis, J.M, Gaudet, R.
登録日2018-04-27
公開日2019-02-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.356 Å)
主引用文献Structures in multiple conformations reveal distinct transition metal and proton pathways in an Nramp transporter.
Elife, 8, 2019
6DD4
DownloadVisualize
BU of 6dd4 by Molmil
Crystal Structure of the Human vaccinia-related kinase bound to a N,N-dipropyl-dihydropteridine inhibitor
分子名称: (7R)-2-[(3,5-difluoro-4-hydroxyphenyl)amino]-7-methyl-5,8-dipropyl-7,8-dihydropteridin-6(5H)-one, ACETATE ION, CHLORIDE ION, ...
著者dos Reis, C.V, Santiago, A.S, de Souza, G.P, Counago, R.M, Azevedo, A, Guimaraes, C, Mascarello, A, Gama, F, Ferreira, M, Massirer, K.B, Arruda, P, Edwards, A.M, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2018-05-09
公開日2018-05-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the Human vaccinia-related kinase bound to a N,N-dipropyl-dihydropteridine inhibitor
To Be Published
2PNE
DownloadVisualize
BU of 2pne by Molmil
Crystal Structure of the Snow Flea Antifreeze Protein
分子名称: 6.5 kDa glycine-rich antifreeze protein
著者Pentelute, B.L, Kent, S.B.H, Gates, Z.P, Tereshko, V, Kossiakoff, A.A, Kurutz, J, Dashnau, J, Vaderkooi, J.M.
登録日2007-04-24
公開日2008-04-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献X-ray structure of snow flea antifreeze protein determined by racemic crystallization of synthetic protein enantiomers
J.Am.Chem.Soc., 130, 2008
1L6B
DownloadVisualize
BU of 1l6b by Molmil
CRYSTAL STRUCTURE ANALYSIS OF THE ALL DNA HOLLIDAY JUNCTION STRUCTURE OF CCGGTACM5CGG
分子名称: 5'-D(*CP*CP*GP*GP*TP*AP*CP*(5CM)P*GP*G)-3', CALCIUM ION
著者Vargason, J.M, Ho, P.S.
登録日2002-03-08
公開日2002-08-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The effect of cytosine methylation on the structure and geometry of the Holliday junction: the structure of d(CCGGTACm5CGG) at 1.5 A resolution.
J.Biol.Chem., 277, 2002
1L7Q
DownloadVisualize
BU of 1l7q by Molmil
Ser117Ala Mutant of Bacterial Cocaine Esterase cocE
分子名称: BENZOIC ACID, cocaine esterase
著者Turner, J.M, Larsen, N.A, Basran, A, Barbas III, C.F, Bruce, N.C, Wilson, I.A, Lerner, R.A.
登録日2002-03-16
公開日2003-02-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Biochemical characterization and structural analysis of a highly proficient cocaine esterase
Biochemistry, 41, 2002
1L7R
DownloadVisualize
BU of 1l7r by Molmil
Tyr44Phe Mutant of Bacterial Cocaine Esterase cocE
分子名称: cocaine esterase
著者Turner, J.M, Larsen, N.A, Basran, A, Barbas III, C.F, Bruce, N.C, Wilson, I.A, Lerner, R.A.
登録日2002-03-16
公開日2003-02-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Biochemical characterization and structural analysis of a highly proficient cocaine esterase.
Biochemistry, 41, 2002
6DFH
DownloadVisualize
BU of 6dfh by Molmil
BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
著者Ozorowski, G, Steichen, J.M, Schief, W.R, Ward, A.B.
登録日2018-05-14
公開日2019-11-06
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses.
Science, 366, 2019
1KHW
DownloadVisualize
BU of 1khw by Molmil
Crystal Structure of Rabbit Hemorrhagic Disease Virus RNA-dependent RNA polymerase complexed with Mn2+
分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
著者Ng, K.K, Cherney, M.M, Vazquez, A.L, Machin, A, Alonso, J.M, Parra, F, James, M.N.
登録日2001-12-01
公開日2002-01-16
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of active and inactive conformations of a caliciviral RNA-dependent RNA polymerase.
J.Biol.Chem., 277, 2002
6CI5
DownloadVisualize
BU of 6ci5 by Molmil
Crystal structure of the formyltransferase PseJ from Anoxybacillus kamchatkensis in complex with UDP-4,6-dideoxy-4-formamido-L-AltNAc and tetrahydrofolate
分子名称: (2R,3R,4S,5R,6S)-3-(acetylamino)-5-(formylamino)-4-hydroxy-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate (non-preferred name), N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
著者Reimer, J.M, Harb, I, Schmeing, T.M.
登録日2018-02-23
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.00003052 Å)
主引用文献Structural Insight into a Novel Formyltransferase and Evolution to a Nonribosomal Peptide Synthetase Tailoring Domain.
ACS Chem. Biol., 13, 2018

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon