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PDB: 5628 results

5SX4
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Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3.
Descriptor: 1,2-ETHANEDIOL, Epidermal growth factor receptor, GLYCEROL, ...
Authors:Sickmier, E.A, Kurzeja, R.J.M, Michelsen, K, Mukta, V, Yang, E, Tasker, A.S.
Deposit date:2016-08-09
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Panitumumab EGFR Complex Reveals a Binding Mechanism That Overcomes Cetuximab Induced Resistance.
Plos One, 11, 2016
5ISH
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BU of 5ish by Molmil
Crystal structure of mouse CARM1 in complex with inhibitor SA0765
Descriptor: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 1-METHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
Authors:Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
Deposit date:2016-03-15
Release date:2017-03-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Crystal structure of mouse CARM1 in complex with inhibitor SA0765
To Be Published
5ISE
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Crystal structure of mouse CARM1 in complex with inhibitor SA0649
Descriptor: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, ...
Authors:Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
Deposit date:2016-03-15
Release date:2017-03-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of mouse CARM1 in complex with SAH at 1.8 Angstroms resolution
To Be Published
8Q3W
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ATP-bound IstB in complex to duplex DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (48-MER) Target DNA FW, DNA (48-MER) Traget DNA Rv, ...
Authors:de la Gandara, A, Spinola-Amilibia, M, Araujo-Bazan, L, Nunez-Ramirez, R, Berger, J.M, Arias-Palomo, E.
Deposit date:2023-08-04
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Molecular basis for transposase activation by a dedicated AAA+ ATPase.
Nature, 630, 2024
6TYK
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Crystal structure of iodotyrosine deiodinase (IYD) in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
Descriptor: 3-IODO-TYROSINE, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Sun, Z, Kavran, J.M, Rokita, S.E.
Deposit date:2019-08-09
Release date:2021-04-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of Tn IYD bound in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
To Be Published
6S1B
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BU of 6s1b by Molmil
Crystal Structure of DYRK1A with small molecule inhibitor
Descriptor: 1,2-ETHANEDIOL, Dual specificity tyrosine-phosphorylation-regulated kinase 1A, SULFATE ION, ...
Authors:Sorrell, F.J, Henderson, S.H, Redondo, C, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2019-06-18
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Kinase Scaffold Repurposing in the Public Domain
To be published
6S1I
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BU of 6s1i by Molmil
Crystal Structure of DYRK1A with small molecule inhibitor
Descriptor: Dual specificity tyrosine-phosphorylation-regulated kinase 1A, SULFATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Sorrell, F.J, Henderson, S.H, Redondo, C, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2019-06-18
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Mining Public Domain Data to Develop Selective DYRK1A Inhibitors.
Acs Med.Chem.Lett., 11, 2020
8Q4D
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BU of 8q4d by Molmil
IstA-IstB(E167Q) Strand Transfer Complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (118-MER) / TIR-transferred strand, ...
Authors:de la Gandara, A, Spinola-Amilibia, M, Araujo-Bazan, L, Nunez-Ramirez, R, Berger, J.M, Arias-Palomo, E.
Deposit date:2023-08-06
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Molecular basis for transposase activation by a dedicated AAA+ ATPase.
Nature, 630, 2024
1TZG
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BU of 1tzg by Molmil
Crystal structure of HIV-1 neutralizing human Fab 4E10 in complex with a 13-residue peptide containing the 4E10 epitope on gp41
Descriptor: Envelope polyprotein GP160, Fab 4E10, GLYCEROL
Authors:Cardoso, R.M.F, Zwick, M.B, Stanfield, R.L, Kunert, R, Binley, J.M, Katinger, H, Burton, D.R, Wilson, I.A.
Deposit date:2004-07-09
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Broadly Neutralizing Anti-HIV Antibody 4E10 Recognizes a Helical Conformation of a Highly Conserved Fusion-Associated Motif in gp41
Immunity, 22, 2005
8Q0V
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BU of 8q0v by Molmil
Endothiapepsin in complex with ligand (3R,5R)-3-(2-((methyl(prop-2-yn-1-yl)amino)methyl)thiazol-4-yl)-5-(3-(4-(trifluoromethyl)phenyl)-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol (CBWS-SE-073)
Descriptor: (3~{R},5~{R})-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8Q0W
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BU of 8q0w by Molmil
Endothiapepsin in complex with ligand (3R,5R)-3-(2-((allyl(methyl)amino)methyl)thiazol-4-yl)-5-(3-(4-(trifluoromethyl)phenyl)-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol (CBWS-SE-086)
Descriptor: (3~{R},5~{R})-3-[2-[[methyl(prop-2-enyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8Q12
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BU of 8q12 by Molmil
Endothiapepsin in complex with ligand (3R,5R)-5-(3-(2-aminophenyl)-1,2,4-oxadiazol-5-yl)-3-(2-((methyl(prop-2-yn-1-yl)amino)methyl)thiazol-4-yl)pyrrolidin-3-ol (CBWS-SE-146.2)
Descriptor: (3~{R},5~{R})-5-[3-(2-aminophenyl)-1,2,4-oxadiazol-5-yl]-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]pyrrolidin-3-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8Q10
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BU of 8q10 by Molmil
Endothiapepsin in complex with ligand (3R,5R)-3-(2-(hydroxymethyl)thiazol-4-yl)-5-(3-(4-(trifluoromethyl)phenyl)-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol (CBWS-SE-125)
Descriptor: (3~{R},5~{R})-3-[2-(hydroxymethyl)-1,3-thiazol-4-yl]-5-[3-[4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8Q14
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BU of 8q14 by Molmil
Endothiapepsin in complex with ligand (3R,5R)-3-(2-((methyl(prop-2-yn-1-yl)amino)methyl)thiazol-4-yl)-5-(3-(2-nitro-4-(trifluoromethyl)phenyl)-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol (CBWS-SE-171)
Descriptor: (3~{R},5~{R})-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[2-nitro-4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8Q13
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BU of 8q13 by Molmil
Endothiapepsin in complex with ligand (3R,5R)-5-(3-(2-amino-4-(trifluoromethyl)phenyl)-1,2,4-oxadiazol-5-yl)-3-(2-((methyl(prop-2-yn-1-yl)amino)methyl)thiazol-4-yl)pyrrolidin-3-ol (CBWS-SE-168)
Descriptor: (3~{R},5~{R})-5-[3-[2-azanyl-4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]pyrrolidin-3-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, DIMETHYL SULFOXIDE, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8PXI
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BU of 8pxi by Molmil
Crystal structure of Endothiapepsin soaked with FRG283
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-{[methyl(prop-2-yn-1-yl)amino]methyl}-1,3-thiazol-4-yl)piperidin-4-ol, DIMETHYL SULFOXIDE, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-23
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
6E9X
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BU of 6e9x by Molmil
DHF91 filament
Descriptor: DHF91 filament
Authors:Lynch, E.M, Shen, H, Fallas, J.A, Kollman, J.M, Baker, D.
Deposit date:2018-08-01
Release date:2018-11-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:De novo design of self-assembling helical protein filaments.
Science, 362, 2018
8Q11
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BU of 8q11 by Molmil
Endothiapepsin in complex with ligand (3R,5R)-5-(3-(4-fluorophenyl)-1,2,4-oxadiazol-5-yl)-3-(2-((methyl(prop-2-yn-1-yl)amino)methyl)thiazol-4-yl)pyrrolidin-3-ol (CBWS-SE-126)
Descriptor: (3~{R},5~{R})-5-[3-(4-fluorophenyl)-1,2,4-oxadiazol-5-yl]-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]pyrrolidin-3-ol, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8Q0X
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Endothiapepsin in complex with ligand (3R,5R)-3-(2-((methyl(propyl)amino)methyl)thiazol-4-yl)-5-(3-(4-(trifluoromethyl)phenyl)-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol (CBWS-SE-087)
Descriptor: (3~{R},5~{R})-3-[2-[[methyl(propyl)amino]methyl]-1,3-thiazol-4-yl]-5-[3-[4-(trifluoromethyl)phenyl]-1,2,4-oxadiazol-5-yl]pyrrolidin-3-ol, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
1UB1
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BU of 1ub1 by Molmil
Solution structure of the matrix attachment region-binding domain of chicken MeCP2
Descriptor: attachment region binding protein
Authors:Heitmann, B, Maurer, T, Weitzel, J.M, Stratling, W.H, Kalbitzer, H.R, Brunner, E, Structural Proteomics in Europe (SPINE)
Deposit date:2003-03-27
Release date:2003-08-05
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the matrix attachment region-binding domain of chicken MeCP2
EUR.J.BIOCHEM., 270, 2003
8Q0Y
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BU of 8q0y by Molmil
Endothiapepsin in complex with ligand (3R,5R)-5-(3-(4-bromophenyl)-1,2,4-oxadiazol-5-yl)-3-(2-((methyl(prop-2-yn-1-yl)amino)methyl)thiazol-4-yl)pyrrolidin-3-ol (CBWS-SE-085.1)
Descriptor: (3~{R},5~{R})-5-[3-(4-bromophenyl)-1,2,4-oxadiazol-5-yl]-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]pyrrolidin-3-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
8Q0Z
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Endothiapepsin in complex with ligand (3R,5R)-3-(2-((methyl(prop-2-yn-1-yl)amino)methyl)thiazol-4-yl)-5-(3-phenyl-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol (CBWS-SE-089)
Descriptor: (3~{R},5~{R})-3-[2-[[methyl(prop-2-ynyl)amino]methyl]-1,3-thiazol-4-yl]-5-(3-phenyl-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
Authors:Mueller, J.M, Eckelt, S, Klebe, G, Glinca, S.
Deposit date:2023-07-29
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Crystal structures of Endothiapepsin with ligands derived from merged fragment hits
To Be Published
1TVK
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BU of 1tvk by Molmil
The binding mode of epothilone A on a,b-tubulin by electron crystallography
Descriptor: EPOTHILONE A, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Nettles, J.H, Li, H, Cornett, B, Krahn, J.M, Snyder, J.P, Downing, K.H.
Deposit date:2004-06-29
Release date:2004-09-14
Last modified:2023-08-23
Method:ELECTRON CRYSTALLOGRAPHY (2.89 Å)
Cite:The binding mode of epothilone A on alpha,beta-tubulin by electron crystallography
Science, 305, 2004
6S11
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BU of 6s11 by Molmil
Crystal Structure of DYRK1A with small molecule inhibitor
Descriptor: 6-pyridin-4-yl-3-[3-(trifluoromethyloxy)phenyl]imidazo[1,2-b]pyridazine, CHLORIDE ION, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
Authors:Sorrell, F.J, Henderson, S.H, Redondo, C, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2019-06-18
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.445 Å)
Cite:Kinase Scaffold Repurposing in the Public Domain
To be published
6S14
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Crystal Structure of DYRK1A with small molecule inhibitor
Descriptor: Dual specificity tyrosine-phosphorylation-regulated kinase 1A, SULFATE ION, ~{N}-cyclopropyl-~{N}-methyl-4-pyrazolo[1,5-b]pyridazin-3-yl-pyrimidin-2-amine
Authors:Sorrell, F.J, Henderson, S.H, Redondo, C, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Elkins, J.M.
Deposit date:2019-06-18
Release date:2019-06-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Kinase Scaffold Repurposing in the Public Domain
To be published

224201

数据于2024-08-28公开中

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