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PDB: 5628 results

8FUZ
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Human IMPDH2 mutant - L245P, treated with GTP, ATP, IMP, and NAD+; filament assembly interface reconstruction
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:O'Neill, A.G, Kollman, J.M.
Deposit date:2023-01-18
Release date:2023-04-19
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Neurodevelopmental disorder mutations in the purine biosynthetic enzyme IMPDH2 disrupt its allosteric regulation.
J.Biol.Chem., 299, 2023
6J5W
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BU of 6j5w by Molmil
Ligand-triggered allosteric ADP release primes a plant NLR complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Disease resistance RPP13-like protein 4, RKS1
Authors:Wang, J.Z, Wang, J, Hu, M.J, Wang, H.W, Zhou, J.M, Chai, J.J.
Deposit date:2019-01-12
Release date:2019-04-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ligand-triggered allosteric ADP release primes a plant NLR complex.
Science, 364, 2019
6J6I
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BU of 6j6i by Molmil
Reconstitution and structure of a plant NLR resistosome conferring immunity
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Disease resistance RPP13-like protein 4, Probable serine/threonine-protein kinase PBL2, ...
Authors:Wang, J.Z, Wang, J, Hu, M.J, Wang, H.W, Zhou, J.M, Chai, J.J.
Deposit date:2019-01-15
Release date:2019-03-20
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Reconstitution and structure of a plant NLR resistosome conferring immunity.
Science, 364, 2019
1VBD
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BU of 1vbd by Molmil
POLIOVIRUS (TYPE 1, MAHONEY STRAIN) COMPLEXED WITH R78206
Descriptor: (METHYLPYRIDAZINE PIPERIDINE PROPYLOXYPHENYL)ETHYLACETATE, MYRISTIC ACID, POLIOVIRUS TYPE 1 MAHONEY
Authors:Grant, R.A, Hiremath, C.N, Filman, D.J, Syed, R, Andries, K, Hogle, J.M.
Deposit date:1996-01-02
Release date:1996-07-11
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of poliovirus complexes with anti-viral drugs: implications for viral stability and drug design.
Curr.Biol., 4, 1994
6J5T
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BU of 6j5t by Molmil
Reconstitution and structure of a plant NLR resistosome conferring immunity
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Disease resistance RPP13-like protein 4, Probable serine/threonine-protein kinase PBL2, ...
Authors:Wang, J.Z, Wang, J, Hu, M.J, Wang, H.W, Zhou, J.M, Chai, J.J.
Deposit date:2019-01-12
Release date:2019-03-20
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Reconstitution and structure of a plant NLR resistosome conferring immunity.
Science, 364, 2019
6J5U
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BU of 6j5u by Molmil
Ligand-triggered allosteric ADP release primes a plant NLR complex
Descriptor: Disease resistance RPP13-like protein 4, Probable serine/threonine-protein kinase PBL2, Protein kinase superfamily protein, ...
Authors:Wang, J.Z, Wang, J, Meijuan, H, Wang, H.W, Zhou, J.M, Chai, J.J.
Deposit date:2019-01-12
Release date:2019-04-03
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Ligand-triggered allosteric ADP release primes a plant NLR complex.
Science, 364, 2019
7AJR
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BU of 7ajr by Molmil
Virtual screening approach leading to the identification of a novel and tractable series of Pseudomonas aeruginosa elastase inhibitors
Descriptor: 2-[2-(1,3-benzothiazol-2-ylmethylcarbamoyl)-1,3-dihydroinden-2-yl]ethanoic acid, Keratinase KP2, SULFATE ION, ...
Authors:Leiris, S, Davies, D.T, Sprinsky, N, Castandet, J, Behria, L, Bodnarchuk, M.S, Sutton, J.M, Mullins, T.M.G, Jones, M.W, Forrest, A.K, Pallin, T.D, Karunakar, P, Martha, S.K, Parusharamulu, B, Ramula, R, Kotha, V, Pottabathini, N, Pothukanuri, S, Lemonnier, M, Everett, M.
Deposit date:2020-09-29
Release date:2021-02-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Virtual Screening Approach to Identifying a Novel and Tractable Series of Pseudomonas aeruginosa Elastase Inhibitors.
Acs Med.Chem.Lett., 12, 2021
7B7F
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BU of 7b7f by Molmil
Room temperature X-ray structure of H/D-exchanged PLL lectin in complex with L-fucose
Descriptor: PLL lectin, alpha-L-fucopyranose, beta-L-fucopyranose
Authors:Gajdos, L, Blakeley, M.P, Kumar, A, Wimmerova, M, Haertlein, M, Forsyth, V.T, Imberty, A, Devos, J.M.
Deposit date:2020-12-10
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions.
Structure, 29, 2021
6J5V
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BU of 6j5v by Molmil
Ligand-triggered allosteric ADP release primes a plant NLR complex
Descriptor: Disease resistance RPP13-like protein 4, Probable serine/threonine-protein kinase PBL2, Protein kinase superfamily protein, ...
Authors:Wang, J.Z, Wang, J, Hu, M.J, Wang, H.W, Zhou, J.M, Chai, J.J.
Deposit date:2019-01-12
Release date:2019-04-03
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (4.25 Å)
Cite:Ligand-triggered allosteric ADP release primes a plant NLR complex.
Science, 364, 2019
7B7E
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BU of 7b7e by Molmil
Room temperature X-ray structure of perdeuterated PLL lectin
Descriptor: PLL lectin
Authors:Gajdos, L, Blakeley, M.P, Kumar, A, Wimmerova, M, Haertlein, M, Forsyth, V.T, Imberty, A, Devos, J.M.
Deposit date:2020-12-10
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions.
Structure, 29, 2021
7B7C
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BU of 7b7c by Molmil
Room temperature X-ray structure of perdeuterated PLL lectin in complex with L-fucose
Descriptor: PLL lectin, alpha-L-fucopyranose, beta-L-fucopyranose
Authors:Gajdos, L, Blakeley, M.P, Kumar, A, Wimmerova, M, Haertlein, M, Forsyth, V.T, Imberty, A, Devos, J.M.
Deposit date:2020-12-10
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions.
Structure, 29, 2021
7B1P
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BU of 7b1p by Molmil
Crystal Structure of Human BACE-1 in Complex with Compound 38a (NB-854)
Descriptor: Beta-secretase 1, ~{N}-[3-[(3~{R},6~{R})-5-azanyl-3,6-dimethyl-6-(trifluoromethyl)-2~{H}-1,4-oxazin-3-yl]phenyl]-5-bromanyl-pyridine-2-carboxamide
Authors:Rondeau, J.M, Wirth, E.
Deposit date:2020-11-25
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Synthesis of the Potent, Selective, and Efficacious beta-Secretase (BACE1) Inhibitor NB-360.
J.Med.Chem., 64, 2021
7B1Q
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BU of 7b1q by Molmil
Crystal Structure of Human BACE-1 in Complex with Compound NB-360 (compound 54)
Descriptor: Beta-secretase 1, ~{N}-[3-[(3~{R},6~{R})-5-azanyl-3,6-dimethyl-6-(trifluoromethyl)-2~{H}-1,4-oxazin-3-yl]-4-fluoranyl-phenyl]-5-cyano-3-methyl-pyridine-2-carboxamide
Authors:Rondeau, J.M, Wirth, E.
Deposit date:2020-11-25
Release date:2021-04-28
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Synthesis of the Potent, Selective, and Efficacious beta-Secretase (BACE1) Inhibitor NB-360.
J.Med.Chem., 64, 2021
7B1E
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BU of 7b1e by Molmil
BACE1 IN COMPLEX WITH compound 3 (NB-641)
Descriptor: Beta-secretase 1, ~{N}-[3-[(4~{S})-2-azanyl-4-methyl-5,6-dihydro-1,3-thiazin-4-yl]phenyl]-5-bromanyl-pyridine-2-carboxamide
Authors:Rondeau, J.M, Wirth, E.
Deposit date:2020-11-24
Release date:2021-04-28
Last modified:2021-05-05
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Synthesis of the Potent, Selective, and Efficacious beta-Secretase (BACE1) Inhibitor NB-360.
J.Med.Chem., 64, 2021
7APW
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BU of 7apw by Molmil
The Fk1 domain of FKBP51 in complex with (1S,5S,6R)-10-(benzo[d]thiazol-6-ylsulfonyl)-5-(methoxymethyl)-3-(pyridin-2-ylethyl)-3,10-diazabicyclo[4.3.1]decan-2-one
Descriptor: (1S,5S,6R)-10-(benzo[d]thiazol-6-ylsulfonyl)-5-(methoxymethyl)-3-(pyridin-2-ylethyl)-3,10-diazabicyclo[4.3.1]decan-2-one, Peptidyl-prolyl cis-trans isomerase FKBP5
Authors:Voll, A.M, Kolos, J.M, Pomplun, S, Riess, B, Purder, P, Merz, S, Bracher, A, Meyners, C, Krewald, V, Hausch, F.
Deposit date:2020-10-20
Release date:2021-11-10
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Picomolar FKBP inhibitors enabled by a single water-displacing methyl group in bicyclic [4.3.1] aza-amides.
Chem Sci, 12, 2021
8G8F
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BU of 8g8f by Molmil
Human IMPDH2 mutant - L245P, treated with ATP, IMP, and NAD+; extended filament segment reconstruction
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase 2, ...
Authors:O'Neill, A.G, Kollman, J.M.
Deposit date:2023-02-17
Release date:2023-04-19
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Neurodevelopmental disorder mutations in the purine biosynthetic enzyme IMPDH2 disrupt its allosteric regulation.
J.Biol.Chem., 299, 2023
6HG4
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BU of 6hg4 by Molmil
Crystal Structure of the human IL-17RC ECD in complex with human IL-17F
Descriptor: Interleukin-17 receptor C, Interleukin-17F
Authors:Rondeau, J.M, Goepfert, A.
Deposit date:2018-08-22
Release date:2020-03-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Structural Analysis Reveals that the Cytokine IL-17F Forms a Homodimeric Complex with Receptor IL-17RC to Drive IL-17RA-Independent Signaling.
Immunity, 52, 2020
6HGA
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BU of 6hga by Molmil
Crystal Structure of the human IL-17RC D2-D3-D4 domains in complex with an anti-APP tag Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-17 receptor C, anti-APP-tag Fab heavy-chain, ...
Authors:Rondeau, J.M, Goepfert, A.
Deposit date:2018-08-23
Release date:2020-03-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Analysis Reveals that the Cytokine IL-17F Forms a Homodimeric Complex with Receptor IL-17RC to Drive IL-17RA-Independent Signaling.
Immunity, 52, 2020
6HA4
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BU of 6ha4 by Molmil
Crystal structure of PAF - p-sulfonatocalix[4]arene complex
Descriptor: 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid, GLYCEROL, Pc24g00380 protein
Authors:Alex, J.M, Rennie, M, Engilberge, S, Batta, G, Crowley, P.B.
Deposit date:2018-08-07
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Calixarene-mediated assembly of a small antifungal protein.
Iucrj, 6, 2019
6HK6
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BU of 6hk6 by Molmil
Human RIOK2 bound to inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-naphthalen-2-yl-~{N}-pyridin-2-yl-ethanamide, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Wang, J, Krojer, T, Bountra, C, Edwards, A.M, Arrowsmith, C, Knapp, S, Elkins, J.M.
Deposit date:2018-09-05
Release date:2018-10-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of human RIOK2 bound to a specific inhibitor.
Open Biology, 9, 2019
6H9G
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BU of 6h9g by Molmil
Influenza A nucleoprotein docked into 3D helical structure of the wild type ribonucleoprotein complex obtained using cryoEM. Conformation 1.
Descriptor: Nucleoprotein, Polypeptide loop
Authors:Coloma, R, Arranz, R, de la Rosa-Trevin, J.M, Sorzano, C.O.S, Munier, S, Carlero, D, Naffakh, N, Ortin, J, Martin-Benito, J.
Deposit date:2018-08-03
Release date:2020-02-12
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Structural insights into influenza A virus ribonucleoproteins reveal a processive helical track as transcription mechanism.
Nat Microbiol, 5, 2020
8B2C
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BU of 8b2c by Molmil
Crystal structure of type I dehydroquinase from Salmonella typhi inhibited by an epoxide derivative
Descriptor: (1~{S},2~{R},4~{R},5~{S},6~{S})-2,4,5-trihydroxy-7-oxabicyclo[4.1.0]heptane-2-carboxylic acid, 3-dehydroquinate dehydratase, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Otero, J.M, Rodriguez, A, Maneiro, M, Lence, E, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2022-09-13
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Quinate-based ligands for irreversible inactivation of the bacterial virulence factor DHQ1 enzyme-A molecular insight.
Front Mol Biosci, 10, 2023
8B2A
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BU of 8b2a by Molmil
Crystal structure of type I dehydroquinase from Salmonella typhi inhibited by an epoxide derivative
Descriptor: (4R,5R)-3-amino-4,5-dihydroxy-cyclohexene-1-carboxylic acid, 3-dehydroquinate dehydratase, CHLORIDE ION, ...
Authors:Otero, J.M, Rodriguez, A, Maneiro, M, Lence, E, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2022-09-13
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Quinate-based ligands for irreversible inactivation of the bacterial virulence factor DHQ1 enzyme-A molecular insight.
Front Mol Biosci, 10, 2023
8B2B
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BU of 8b2b by Molmil
Crystal structure of type I dehydroquinase from Salmonella typhi inhibited by an epoxide derivative
Descriptor: (4R,5R)-3-amino-4,5-dihydroxy-cyclohexene-1-carboxylic acid, 3-dehydroquinate dehydratase, SODIUM ION
Authors:Otero, J.M, Rodriguez, A, Maneiro, M, Lence, E, Thompson, P, Hawkins, A.R, Gonzalez-Bello, C, van Raaij, M.J.
Deposit date:2022-09-13
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Quinate-based ligands for irreversible inactivation of the bacterial virulence factor DHQ1 enzyme-A molecular insight.
Front Mol Biosci, 10, 2023
7BB4
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BU of 7bb4 by Molmil
Crystal structure of perdeuterated PLL lectin in complex with L-fucose
Descriptor: GLYCEROL, PLL lectin, alpha-L-fucopyranose, ...
Authors:Gajdos, L, Blakeley, M.P, Kumar, A, Wimmerova, M, Haertlein, M, Forsyth, V.T, Imberty, A, Devos, J.M.
Deposit date:2020-12-16
Release date:2021-03-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions.
Structure, 29, 2021

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