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PDB: 2408 results

5C8W
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BU of 5c8w by Molmil
PKG II's Amino Terminal Cyclic Nucleotide Binding Domain (CNB-A) in a complex with cGMP
Descriptor: CYCLIC GUANOSINE MONOPHOSPHATE, MALONIC ACID, SODIUM ION, ...
Authors:Campbell, J.C, Reger, A.S, Huang, G.Y, Sankaran, B, Kim, J.J, Kim, C.W.
Deposit date:2015-06-26
Release date:2016-01-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Cyclic Nucleotide Selectivity in cGMP-dependent Protein Kinase II.
J.Biol.Chem., 291, 2016
3FMR
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BU of 3fmr by Molmil
Crystal structure of an Encephalitozoon cuniculi methionine aminopeptidase type 2 with angiogenesis inhibitor TNP470 bound
Descriptor: (1R,2S,3S,4R)-4-hydroxy-2-methoxy-4-methyl-3-[(2R,3R)-2-methyl-3-(3-methylbut-2-en-1-yl)oxiran-2-yl]cyclohexyl (chloroacetyl)carbamate, FE (III) ION, Methionine aminopeptidase 2, ...
Authors:Alvarado, J.J, Russell, M, Zhang, A, Adams, J, Toro, R, Burley, S.K, Weiss, L.M, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-12-22
Release date:2009-01-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structure of a microsporidian methionine aminopeptidase type 2 complexed with fumagillin and TNP-470.
Mol.Biochem.Parasitol., 168, 2009
3FNM
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BU of 3fnm by Molmil
Crystal structure of acivicin-inhibited gamma-glutamyltranspeptidase reveals critical roles for its C-terminus in autoprocessing and catalysis
Descriptor: (2S)-AMINO[(5S)-3-CHLORO-4,5-DIHYDROISOXAZOL-5-YL]ACETIC ACID, Gamma-glutamyltranspeptidase (Ggt) Large subunit, Gamma-glutamyltranspeptidase (Ggt) Small subunit
Authors:Williams, K, Cullati, S, Sand, A, Biterova, E.I, Barycki, J.J.
Deposit date:2008-12-25
Release date:2009-05-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Acivicin-Inhibited gamma-Glutamyltranspeptidase Reveals Critical Roles for Its C-Terminus in Autoprocessing and Catalysis.
Biochemistry, 48, 2009
4GGK
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BU of 4ggk by Molmil
Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD) bound to tungstate
Descriptor: Mitochondrial cardiolipin hydrolase, TUNGSTATE(VI)ION, ZINC ION
Authors:Ipsaro, J.J, Haase, A.D, Hannon, G.J, Joshua-Tor, L.
Deposit date:2012-08-06
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis.
Nature, 491, 2012
4GL9
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BU of 4gl9 by Molmil
Crystal structure of inhibitory protein SOCS3 in complex with JAK2 kinase domain and fragment of GP130 intracellular domain
Descriptor: 2-TERT-BUTYL-9-FLUORO-3,6-DIHYDRO-7H-BENZ[H]-IMIDAZ[4,5-F]ISOQUINOLINE-7-ONE, Interleukin-6 receptor subunit beta, PHOSPHATE ION, ...
Authors:Kershaw, N.J, Murphy, J.M, Laktyushin, A, Nicola, N.A, Babon, J.J.
Deposit date:2012-08-14
Release date:2013-03-06
Last modified:2018-06-13
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:SOCS3 binds specific receptor-JAK complexes to control cytokine signaling by direct kinase inhibition.
Nat.Struct.Mol.Biol., 20, 2013
3R1O
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BU of 3r1o by Molmil
Odorant Binding Protein 7 from Anopheles gambiae with Four Disulfide Bridges
Descriptor: Odorant binding protein, antennal, PALMITIC ACID
Authors:Lagarde, A, Spinelli, S, Tegoni, M, Field, L, He, X, Zhou, J.J, Cambillau, C.
Deposit date:2011-03-11
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of Odorant Binding Protein 7 from Anopheles gambiae Exhibits an Outstanding Adaptability of Its Binding Site.
J.Mol.Biol., 414, 2011
4GOY
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BU of 4goy by Molmil
The crystal structure of human fascin 1 K41A mutant
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BROMIDE ION, CHLORIDE ION, ...
Authors:Yang, S.Y, Huang, F.K, Huang, J, Chen, S, Jakoncic, J, Leo-Macias, A, Diaz-Avalos, R, Chen, L, Zhang, J.J, Huang, X.Y.
Deposit date:2012-08-20
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular mechanism of fascin function in filopodial formation.
J.Biol.Chem., 288, 2013
1ZLL
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BU of 1zll by Molmil
NMR Structure of Unphosphorylated Human Phospholamban Pentamer
Descriptor: Cardiac phospholamban
Authors:Oxenoid, K, Chou, J.J.
Deposit date:2005-05-06
Release date:2005-08-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of phospholamban pentamer reveals a channel-like architecture in membranes
Proc.Natl.Acad.Sci.USA, 102, 2005
1ZGR
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BU of 1zgr by Molmil
Crystal structure of the Parkia platycephala seed lectin
Descriptor: Mannose/glucose-specific lectin
Authors:Gallego del Sol, F, Cavada, B.S, Calvete, J.J.
Deposit date:2005-04-22
Release date:2005-10-11
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The first crystal structure of a mimosoideae lectin reveals a novel quaternary arrangement of a widespread domain.
J.Mol.Biol., 353, 2005
6NTG
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BU of 6ntg by Molmil
Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by A-234 in Complex with Reactivator, HI-6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(AMINOCARBONYL)-1-[({2-[(E)-(HYDROXYIMINO)METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYRIDINIUM, ...
Authors:Bester, S.M, Guelta, M.A, Height, J.J, Pegan, S.D.
Deposit date:2019-01-29
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.652 Å)
Cite:Insights into inhibition of human acetylcholinesterase by Novichok, A-series Nerve Agents
To Be Published
6NTF
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BU of 6ntf by Molmil
Crystal structure of a computationally optimized H5 influenza hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Huang, J, Bar-Peled, Y, Mousa, J.J.
Deposit date:2019-01-29
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural and antigenic characterization of a computationally-optimized H5 hemagglutinin influenza vaccine.
Vaccine, 37, 2019
6NTN
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BU of 6ntn by Molmil
Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by A-230 in Complex with the Reactivator, HI-6
Descriptor: (S)-N-[(1E)-1-(diethylamino)ethylidene]-P-methylphosphonamidic fluoride, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bester, S.M, Guelta, M.A, Height, J.J, Pegan, S.D.
Deposit date:2019-01-29
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Insights into inhibition of human acetylcholinesterase by Novichok, A-series Nerve Agents
To Be Published
1BKJ
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BU of 1bkj by Molmil
NADPH:FMN OXIDOREDUCTASE FROM VIBRIO HARVEYI
Descriptor: FLAVIN MONONUCLEOTIDE, NADPH-FLAVIN OXIDOREDUCTASE, PHOSPHATE ION
Authors:Tanner, J.J, Lei, B, TU, S.-C, Krause, K.L.
Deposit date:1998-07-08
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Flavin reductase P: structure of a dimeric enzyme that reduces flavin.
Biochemistry, 35, 1996
3R1P
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BU of 3r1p by Molmil
Odorant Binding Protein 7 from Anopheles gambiae with Four Disulfide Bridges, form P1
Descriptor: Odorant binding protein, antennal, PALMITIC ACID
Authors:Lagarde, A, Spinelli, S, Tegoni, M, Field, L, He, X, Zhou, J.J, Cambillau, C.
Deposit date:2011-03-11
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of Odorant Binding Protein 7 from Anopheles gambiae Exhibits an Outstanding Adaptability of Its Binding Site.
J.Mol.Biol., 414, 2011
5CKU
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BU of 5cku by Molmil
Structure of Aspergillus fumigatus ornithine hydroxylase (SidA) mutant N323A bound to NADP and ornithine
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, L-ornithine, ...
Authors:Tanner, J.J, Qureshi, I.A.
Deposit date:2015-07-15
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Contribution to catalysis of ornithine binding residues in ornithine N5-monooxygenase.
Arch.Biochem.Biophys., 585, 2015
3FST
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BU of 3fst by Molmil
Crystal Structure of Escherichia coli Methylenetetrahydrofolate Reductase Mutant Phe223Leu at pH 7.4
Descriptor: 5,10-methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE, MESO-ERYTHRITOL, ...
Authors:Tanner, J.J.
Deposit date:2009-01-12
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Functional role for the conformationally mobile phenylalanine 223 in the reaction of methylenetetrahydrofolate reductase from Escherichia coli.
Biochemistry, 48, 2009
1XKJ
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BU of 1xkj by Molmil
BACTERIAL LUCIFERASE BETA2 HOMODIMER
Descriptor: BETA2 LUCIFERASE
Authors:Tanner, J.J, Krause, K.L.
Deposit date:1996-10-08
Release date:1997-07-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of bacterial luciferase beta 2 homodimer: implications for flavin binding.
Biochemistry, 36, 1997
4HHG
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BU of 4hhg by Molmil
Crystal structure of the Pseudomonas aeruginosa azurin, RuH107NO YOH109
Descriptor: Azurin, COPPER (II) ION, DELTA-BIS(2,2'-BIPYRIDINE)IMIDAZOLE RUTHENIUM (II)
Authors:Herrera, N, Warren, J.J, Gray, H.B.
Deposit date:2012-10-09
Release date:2012-11-21
Last modified:2013-08-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Electron Flow through Nitrotyrosinate in Pseudomonas aeruginosa Azurin.
J.Am.Chem.Soc., 135, 2013
6NTK
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BU of 6ntk by Molmil
Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by A-232
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bester, S.M, Guelta, M.A, Height, J.J, Pegan, S.D.
Deposit date:2019-01-29
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Insights into inhibition of human acetylcholinesterase by Novichok, A-series Nerve Agents
To Be Published
1B4Q
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BU of 1b4q by Molmil
Solution structure of human thioltransferase complex with glutathione
Descriptor: GLUTATHIONE, PROTEIN (HUMAN THIOLTRANSFERASE)
Authors:Yang, Y, Jao, S.C, Nanduri, S, Starke, D.W, Mieyal, J.J, Qin, J.
Deposit date:1998-12-25
Release date:1999-12-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Reactivity of the human thioltransferase (glutaredoxin) C7S, C25S, C78S, C82S mutant and NMR solution structure of its glutathionyl mixed disulfide intermediate reflect catalytic specificity.
Biochemistry, 37, 1998
6NTO
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BU of 6nto by Molmil
Crystal Structure of Recombinant Human Acetylcholinesterase Inhibited by A-230
Descriptor: (S)-N-[(1E)-1-(diethylamino)ethylidene]-P-methylphosphonamidic fluoride, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bester, S.M, Guelta, M.A, Height, J.J, Pegan, S.D.
Deposit date:2019-01-29
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:Insights into inhibition of human acetylcholinesterase by Novichok, A-series Nerve Agents
To Be Published
8DKQ
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BU of 8dkq by Molmil
Minimal PutA proline dehydrogenase domain (design #2) complexed with 2-(Furan-2-yl)acetic acid
Descriptor: (furan-2-yl)acetic acid, Bifunctional protein PutA, DI(HYDROXYETHYL)ETHER, ...
Authors:Tanner, J.J, Bogner, A.N.
Deposit date:2022-07-05
Release date:2022-12-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structure-based engineering of minimal proline dehydrogenase domains for inhibitor discovery.
Protein Eng.Des.Sel., 35, 2022
6O1O
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BU of 6o1o by Molmil
Cryo-EM structure of the T. thermophilus Csm complex bound to target ssRNA
Descriptor: Csm1, Csm2, Csm3, ...
Authors:Liu, J.J, Liu, T.Y.
Deposit date:2019-02-21
Release date:2019-07-10
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Target preference of Type III-A CRISPR-Cas complexes at the transcription bubble.
Nat Commun, 10, 2019
3DSH
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BU of 3dsh by Molmil
Crystal structure of dimeric interferon regulatory factor 5 (IRF-5) transactivation domain
Descriptor: Interferon regulatory factor 5
Authors:Chen, W, Lam, S.S, Srinath, H, Jiang, Z, Correia, J.J, Schiffer, C, Fitzgerald, K.A, Lin, K, Royer Jr, W.E.
Deposit date:2008-07-12
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5.
Nat.Struct.Mol.Biol., 15, 2008
8DKP
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BU of 8dkp by Molmil
Minimal PutA proline dehydrogenase domain (design #2) complexed with S-(-)-tetrahydro-2-furoic acid
Descriptor: Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, TETRAHYDROFURAN-2-CARBOXYLIC ACID
Authors:Tanner, J.J, Bogner, A.N.
Deposit date:2022-07-05
Release date:2022-12-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Structure-based engineering of minimal proline dehydrogenase domains for inhibitor discovery.
Protein Eng.Des.Sel., 35, 2022

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