Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 results

3ZY4
DownloadVisualize
BU of 3zy4 by Molmil
Crystal structure of POFUT1 apo-form (crystal-form-I)
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PUTATIVE GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1, SULFATE ION
Authors:Lira-Navarrete, E, Valero-Gonzalez, J, Villanueva, R, Martinez-Julvez, M, Tejero, T, Merino, P, Panjikar, S, Hurtado-Guerrero, R.
Deposit date:2011-08-17
Release date:2011-09-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural Insights Into the Mechanism of Protein O-Fucosylation.
Plos One, 6, 2011
3ZYA
DownloadVisualize
BU of 3zya by Molmil
Human p38 MAP Kinase in Complex with 2-amino-phenylamino- dibenzosuberone
Descriptor: 2-AMINO-PHENYLAMINO-DIBENZOSUBERONE, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Romir, J, Koeberle, S.C, Laufer, S.A, Stehle, T.
Deposit date:2011-08-18
Release date:2011-12-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Skepinone-L is a Selective P38 Mitogen-Activated Protein Kinase Inhibitor.
Nat.Chem.Biol., 8, 2011
3ZYV
DownloadVisualize
BU of 3zyv by Molmil
Crystal structure of the mouse liver Aldehyde Oxidase 3 (mAOX3)
Descriptor: AOX3, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Trincao, J, Coelho, C, Mahro, M, Rodrigues, D, Terao, M, Garattini, E, Leimkuehler, S, Romao, M.J.
Deposit date:2011-08-27
Release date:2012-09-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.545 Å)
Cite:The First Mammalian Aldehyde Oxidase Crystal Structure: Insights Into Substrate Specificity.
J.Biol.Chem., 287, 2012
3J3I
DownloadVisualize
BU of 3j3i by Molmil
Penicillium chrysogenum virus (PcV) capsid structure
Descriptor: Capsid protein
Authors:Luque, D, Gomez-Blanco, J, Garriga, D, Brilot, A, Gonzalez, J.M, Havens, W.H, Carrascosa, J.L, Trus, B.L, Verdaguer, N, Grigorieff, N, Ghabrial, S.A, Caston, J.R.
Deposit date:2013-03-08
Release date:2014-05-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM near-atomic structure of a dsRNA fungal virus shows ancient structural motifs preserved in the dsRNA viral lineage.
Proc.Natl.Acad.Sci.USA, 111, 2014
1NB6
DownloadVisualize
BU of 1nb6 by Molmil
HC-J4 RNA polymerase complexed with UTP
Descriptor: MANGANESE (II) ION, URIDINE 5'-TRIPHOSPHATE, polyprotein
Authors:O'Farrell, D.J, Trowbridge, R, Rowlands, D.J, Jaeger, J.
Deposit date:2002-12-02
Release date:2003-03-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Substrate complexes of hepatitis C virus RNA polymerase (HC-J4): structural evidence for nucleotide import and de-novo initiation.
J.Mol.Biol., 326, 2003
3HPD
DownloadVisualize
BU of 3hpd by Molmil
Structure of hydroxyethylthiazole kinase protein from pyrococcus horikoshii OT3
Descriptor: Hydroxyethylthiazole kinase, PHOSPHATE ION
Authors:Jeyakanthan, J, Thamotharan, S, Kuramitsu, S, Yokoyama, S, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-06-04
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of Hydroxyethylthiazole Kinase Protein from Pyrococcus Horikoshii Ot3
To be Published
1UCN
DownloadVisualize
BU of 1ucn by Molmil
X-ray structure of human nucleoside diphosphate kinase A complexed with ADP at 2 A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, ...
Authors:Chen, Y, Gallois-Montbrun, S, Schneider, B, Veron, M, Morera, S, Deville-Bonne, D, Janin, J.
Deposit date:2003-04-16
Release date:2003-09-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nucleotide Binding to Nucleoside Diphosphate Kinases: X-ray Structure of Human NDPK-A in Complex with ADP and Comparison to Protein Kinases
J.Mol.Biol., 332, 2003
3HQ8
DownloadVisualize
BU of 3hq8 by Molmil
CcpA from G. sulfurreducens S134P/V135K variant
Descriptor: CALCIUM ION, Cytochrome c551 peroxidase, IMIDAZOLE, ...
Authors:Hoffmann, M, Seidel, J, Einsle, O.
Deposit date:2009-06-05
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CcpA from Geobacter sulfurreducens is a basic di-heme cytochrome c peroxidase.
J.Mol.Biol., 393, 2009
3ZKT
DownloadVisualize
BU of 3zkt by Molmil
SOLUTION STRUCTURE OF THE SOMATOSTATIN SST3 RECEPTOR ANTAGONIST TAU- CONOTOXIN CnVA
Descriptor: TAU-CNVA
Authors:Petrel, C, Hocking, H.G, Reynaud, M, Favreau, P, Paolini-Bertrand, M, Peigneur, S, Upert, G, Tytgat, J, Gilles, N, Hartley, O, Boelens, R, Stocklin, R, Servent, D.
Deposit date:2013-01-24
Release date:2013-04-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification, Structural and Pharmacological Characterization of Tau-Cnva, a Conopeptide that Selectively Interacts with Somatostatin Sst3 Receptor.
Biochem.Pharmacol, 85, 2013
3HQW
DownloadVisualize
BU of 3hqw by Molmil
Discovery of novel inhibitors of PDE10A
Descriptor: 4,5-bis(4-methoxyphenyl)-2-thiophen-2-yl-1H-imidazole, MAGNESIUM ION, ZINC ION, ...
Authors:Pandit, J, Marr, E.S.
Deposit date:2009-06-08
Release date:2009-08-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of a Novel Class of Phosphodiesterase 10A Inhibitors and Identification of Clinical Candidate 2-[4-(1-Methyl-4-pyridin-4-yl-1H-pyrazol-3-yl)-phenoxymethyl]-quinoline (PF-2545920) for the Treatment of Schizophrenia
J.Med.Chem., 52, 2009
3ZGK
DownloadVisualize
BU of 3zgk by Molmil
NMR solution structure of the RXLR effector AVR3a11 from Phytophthora Capsici
Descriptor: AVR3A11
Authors:Tolchard, J, Chambers, V.S, Boutemy, L.S, Gathercole, R.L, Banfield, M.J, Blumenschein, T.M.
Deposit date:2012-12-18
Release date:2014-01-08
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:NMR Solution Structure of the Avr3A11 from Phytophthora Capsi
To be Published
3HRE
DownloadVisualize
BU of 3hre by Molmil
X-ray crystallographic structure of CTX-M-9 S70G
Descriptor: CTX-M-9 extended-spectrum beta-lactamase, PHOSPHATE ION
Authors:Delmas, J, Leyssene, D, Dubois, D, Vazeille, E, Robin, F, Bonnet, R.
Deposit date:2009-06-09
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural insights into substrate recognition and product expulsion in CTX-M enzymes.
J.Mol.Biol., 400, 2010
3HSJ
DownloadVisualize
BU of 3hsj by Molmil
Crystal structure of E. coli HPPK(N55A)
Descriptor: ACETATE ION, GLYCEROL, HPPK
Authors:Blaszczyk, J, Li, Y, Yan, H, Ji, X.
Deposit date:2009-06-10
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Pterin-binding site mutation Y53A, N55A or F123A and activity of E. coli HPPK
To be Published
3HTI
DownloadVisualize
BU of 3hti by Molmil
Crystal structure of multidrug binding protein EbrR complexed with malachite green
Descriptor: EbrA repressor, MALACHITE GREEN
Authors:Dong, J, Ni, L, Schumacher, M, Brennan, R.
Deposit date:2009-06-11
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural plasticity is key to multiple ligand binding by the multidrug binding regulator EbrR
To be Published
3ZFG
DownloadVisualize
BU of 3zfg by Molmil
Human enterovirus 71 in complex with capsid binding inhibitor WIN51711
Descriptor: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE, VP1, VP2, ...
Authors:Plevka, P, Perera, R, Yap, M.L, Cardosa, J, Kuhn, R.J, Rossmann, M.G.
Deposit date:2012-12-11
Release date:2013-03-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of Human Enterovirus 71 in Complex with a Capsid-Binding Inhibitor.
Proc.Natl.Acad.Sci.USA, 110, 2013
3HVN
DownloadVisualize
BU of 3hvn by Molmil
Crystal structure of cytotoxin protein suilysin from Streptococcus suis
Descriptor: 1,1,1,3,3,3-hexafluoropropan-2-ol, HEPTANE-1,2,3-TRIOL, Hemolysin
Authors:Xu, L, Huang, B, Du, H, Zhang, C.X, Xu, J, Li, X, Rao, Z.
Deposit date:2009-06-16
Release date:2010-03-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.852 Å)
Cite:Crystal structure of cytotoxin protein suilysin from Streptococcus suis.
Protein Cell, 1, 2010
3ZBQ
DownloadVisualize
BU of 3zbq by Molmil
Protofilament of TubZ from Bacteriophage PhiKZ
Descriptor: GUANOSINE-5'-DIPHOSPHATE, PHIKZ039
Authors:Aylett, C.H.S, Lowe, J.
Deposit date:2012-11-12
Release date:2013-04-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the Tubulin/Ftsz-Like Protein Tubz from Pseudomonas Bacteriophage Phikz
J.Mol.Biol., 425, 2013
3HTA
DownloadVisualize
BU of 3hta by Molmil
Crystal structure of multidrug binding protein EbrR complexed with imidazole
Descriptor: EbrA repressor, IMIDAZOLE
Authors:Dong, J, Ni, L, Schumacher, M, Brennan, R.
Deposit date:2009-06-11
Release date:2010-07-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural plasticity is key to multiple ligand binding by the multidrug binding regulator EbrR
To be Published
4AH2
DownloadVisualize
BU of 4ah2 by Molmil
HLA-DR1 with covalently linked CLIP106-120 in canonical orientation
Descriptor: GLYCEROL, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN GAMMA CHAIN, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN,DRB1-1 BETA CHAIN, ...
Authors:Schlundt, A, Guenther, S, Sticht, J, Wieczorek, M, Roske, Y, Heinemann, U, Freund, C.
Deposit date:2012-02-03
Release date:2012-08-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Peptide Linkage to the Alpha-Subunit of Mhcii Creates a Stably Inverted Antigen Presentation Complex.
J.Mol.Biol., 423, 2012
4AD1
DownloadVisualize
BU of 4ad1 by Molmil
Structure of the GH99 endo-alpha-mannosidase from Bacteroides xylanisolvens
Descriptor: GLYCOSYL HYDROLASE FAMILY 71
Authors:Thompson, A.J, Williams, R.J, Hakki, Z, Alonzi, D.S, Wennekes, T, Gloster, T.M, Songsrirote, K, Thomas-Oates, J.E, Wrodnigg, T.M, Spreitz, J, Stuetz, A.E, Butters, T.D, Williams, S.J, Davies, G.J.
Deposit date:2011-12-21
Release date:2012-02-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Mechanistic Insight Into N-Glycan Processing by Endo-Alpha-Mannosidase.
Proc.Natl.Acad.Sci.USA, 109, 2012
3HZ5
DownloadVisualize
BU of 3hz5 by Molmil
Crystal structure of Hsp90 with fragment Z064
Descriptor: Heat shock protein HSP 90-alpha, N-[4-(5-furan-2-yl-3-methyl-1H-pyrazol-4-yl)butyl]-N-methyl-7H-purin-6-amine
Authors:Barker, J, Mather, O, Cheng, R.K.Y, Palan, S, Felicetti, B, Whittaker, M.
Deposit date:2009-06-23
Release date:2010-07-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Hsp90 with fragment Z064
to be published
4AB2
DownloadVisualize
BU of 4ab2 by Molmil
ATP-triggered molecular mechanics of the chaperonin GroEL
Descriptor: 60 KDA CHAPERONIN, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Clare, D.K, Vasishtan, D, Stagg, S, Quispe, J, Farr, G.W, Topf, M, Horwich, A.L, Saibil, H.R.
Deposit date:2011-12-06
Release date:2012-12-12
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.5 Å)
Cite:ATP-Triggered Conformational Changes Delineate Substrate-Binding and -Folding Mechanics of the Groel Chaperonin.
Cell(Cambridge,Mass.), 149, 2012
4AD5
DownloadVisualize
BU of 4ad5 by Molmil
Structure of the GH99 endo-alpha-mannosidase from Bacteroides xylanisolvens in complex with glucose-1,3-deoxymannojirimycin and alpha-1,2-mannobiose
Descriptor: 1-DEOXYMANNOJIRIMYCIN, GLYCOSYL HYDROLASE FAMILY 71, alpha-D-glucopyranose, ...
Authors:Thompson, A.J, Williams, R.J, Hakki, Z, Alonzi, D.S, Wennekes, T, Gloster, T.M, Songsrirote, K, Thomas-Oates, J.E, Wrodnigg, T.M, Spreitz, J, Stuetz, A.E, Butters, T.D, Williams, S.J, Davies, G.J.
Deposit date:2011-12-21
Release date:2012-02-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Mechanistic Insight Into N-Glycan Processing by Endo-Alpha-Mannosidase.
Proc.Natl.Acad.Sci.USA, 109, 2012
4AKZ
DownloadVisualize
BU of 4akz by Molmil
CRYSTAL STRUCTURE OF VIRB8 FROM BRUCELLA SUIS
Descriptor: TYPE IV SECRETION SYSTEM PROTEIN VIRB8
Authors:Coincon, M, Smith, M.A, Sygusch, J, Baron, C.
Deposit date:2012-02-29
Release date:2012-09-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Identification of the Binding Site of Brucella Virb8 Interaction Inhibitors.
Chem.Biol., 19, 2012
4AMU
DownloadVisualize
BU of 4amu by Molmil
Structure of ornithine carbamoyltransferase from Mycoplasma penetrans with a P321 space group
Descriptor: ORNITHINE CARBAMOYLTRANSFERASE, CATABOLIC
Authors:Gallego, P, Benach, J, Planell, R, Querol, E, Perez-Pons, J.A, Reverter, D.
Deposit date:2012-03-13
Release date:2012-03-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Characterization of the Enzymes Composing the Arginine Deiminase Pathway in Mycoplasma Penetrans.
Plos One, 7, 2012

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon