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PDB: 42550 results

4PRF
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BU of 4prf by Molmil
A Second Look at the HDV Ribozyme Structure and Dynamics.
Descriptor: Hepatitis Delta virus ribozyme, STRONTIUM ION, U1 small nuclear ribonucleoprotein A
Authors:Kapral, G.J, Jain, S, Noeske, J, Doudna, J.A, Richardson, D.C, Richardson, J.S.
Deposit date:2014-03-05
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.395 Å)
Cite:New tools provide a second look at HDV ribozyme structure, dynamics and cleavage.
Nucleic Acids Res., 42, 2014
5DVH
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BU of 5dvh by Molmil
Structure of the Kunitz-type cysteine protease inhibitor PCPI-3 from potato
Descriptor: CHLORIDE ION, PCPI-3
Authors:Brynda, J, Mishra, M, Mares, M.
Deposit date:2015-09-21
Release date:2016-10-12
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Kunitz-type cysteine protease inhibitor PCPI-3 from potato
To Be Published
8HRU
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BU of 8hru by Molmil
Cryo-EM structure of ACE2
Descriptor: Angiotensin-converting enzyme 2
Authors:Xu, J, Liu, N, Wang, H.W.
Deposit date:2022-12-16
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structure of ACE2
To Be Published
5DWV
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BU of 5dwv by Molmil
Crystal structure of the Luciferase complexed with substrate analogue
Descriptor: 2-[6-(cyclobuta-1,3-dien-1-ylamino)-1,3-benzothiazol-2-yl]-1,3-thiazol-4-ol, Luciferin 4-monooxygenase
Authors:Su, J, Li, Z, Yuan, Z, Gu, L.
Deposit date:2015-09-23
Release date:2016-09-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the Luciferase complexed with substrate analogue
To Be Published
8HRI
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BU of 8hri by Molmil
SARS-CoV-2 Delta variant spike protein
Descriptor: Spike glycoprotein
Authors:Xu, J, Cheng, H, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
5DY7
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BU of 5dy7 by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED4
Descriptor: 7-(trifluoromethyl)-3,4-dihydroquinoxalin-2(1H)-one, NITRATE ION, Peregrin
Authors:Zhu, J, Caflisch, A.
Deposit date:2015-09-24
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
8HRM
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BU of 8hrm by Molmil
Cryo-EM structure of streptavidin
Descriptor: Streptavidin
Authors:Xu, J, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4PMJ
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BU of 4pmj by Molmil
Crystal structure of a putative oxidoreductase from Sinorhizobium meliloti 1021 in complex with NADP
Descriptor: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative oxidoreductase
Authors:Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Szlachta, K, Zimmerman, M.D, Hillerich, B.S, Gizzi, A, Toro, R, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-05-21
Release date:2014-06-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a putative oxidoreductase from Sinorhizobiummeliloti 1021 in complex with NADP
to be published
5E2C
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BU of 5e2c by Molmil
Crystal structure of N-terminal domain of cytoplasmic peptidase PepQ from Mycobacterium tuberculosis H37Rv
Descriptor: Xaa-Pro dipeptidase
Authors:Chang, C, Endres, L, Endres, M, SACCHETTINI, J, JOACHIMIAK, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2015-09-30
Release date:2015-10-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of N-terminal domain of cytoplasmic peptidase PepQ from Mycobacterium tuberculosis H37Rv
To Be Published
8HRK
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BU of 8hrk by Molmil
SARS-CoV-2 Delta S-RBD-ACE2 complex
Descriptor: Processed angiotensin-converting enzyme 2, Spike protein S1
Authors:Xu, J, Meng, F, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4PDY
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BU of 4pdy by Molmil
Crystal structure of aminoglycoside phosphotransferase from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
Descriptor: Aminoglycoside phosphotransferase, HISTIDINE, THIOCYANATE ION
Authors:Chang, C, Li, H, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-22
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of aminoglycoside phosphotransferase from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
To be published
8HPP
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BU of 8hpp by Molmil
Crystal structure of human INTS3 with SAGE1
Descriptor: Integrator complex subunit 3, Sarcoma antigen 1
Authors:Deng, W, Wu, J, Lei, M.
Deposit date:2022-12-12
Release date:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cancer-testis antigen SAGE1 is a pan-cancer master regulator of RNA polymerase II
To Be Published
8HRN
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BU of 8hrn by Molmil
Cryo-EM structure of ACE2
Descriptor: Angiotensin-converting enzyme 2
Authors:Xu, J, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
1WCT
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BU of 1wct by Molmil
A NOVEL CONOTOXIN FROM CONUS TEXTILE WITH UNUSUAL POST-TRANSLATIONAL MODIFICATIONS REDUCES PRESYNAPTIC CALCIUM INFLUX, NMR, 1 STRUCTURE, GLYCOSYLATED PROTEIN
Descriptor: OMEGAC-TXIX, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
Authors:Rigby, A.C, Hambe, B, Czerwiec, E, Baleja, J.D, Furie, B.C, Furie, B, Stenflo, J.
Deposit date:1998-12-18
Release date:1999-06-08
Last modified:2020-07-29
Method:SOLUTION NMR
Cite:A conotoxin from Conus textile with unusual posttranslational modifications reduces presynaptic Ca2+ influx.
Proc.Natl.Acad.Sci.USA, 96, 1999
5E38
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BU of 5e38 by Molmil
Structural basis of mapping the spontaneous mutations with 5-flourouracil in uracil phosphoribosyltransferase from Mycobacterium tuberculosis
Descriptor: Uracil phosphoribosyltransferase
Authors:Ghode, P, Jobichen, C, Ramachandran, S, Bifani, P, Sivaraman, J.
Deposit date:2015-10-02
Release date:2015-10-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of mapping the spontaneous mutations with 5-flurouracil in uracil phosphoribosyltransferase from Mycobacterium tuberculosis
Biochem.Biophys.Res.Commun., 467, 2015
3NHQ
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BU of 3nhq by Molmil
The dark Pfr structure of the photosensory core module of P. aeruginosa Bacteriophytochrome
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome
Authors:Yang, X, Ren, Z, Kuk, J, Moffat, K.
Deposit date:2010-06-14
Release date:2011-11-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
4PFZ
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BU of 4pfz by Molmil
X-ray Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase from Mycobacterium smegmatis
Descriptor: 5-carboxymethyl-2-hydroxymuconate delta-isomerase, SODIUM ION
Authors:Horanyi, P.S, Abendroth, J, Lorimer, D, Edwards, T, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-05-01
Release date:2014-11-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase from Mycobacterium smegmatis
To Be Published
8HRL
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BU of 8hrl by Molmil
SARS-CoV-2 Delta S-RBD-ACE2
Descriptor: Processed angiotensin-converting enzyme 2, Spike protein S1
Authors:Xu, J, Meng, F, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
8HRJ
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BU of 8hrj by Molmil
SARS-CoV-2 Delta variant spike protein
Descriptor: Spike glycoprotein
Authors:Xu, J, Cheng, H, Liu, N, Wang, H.W.
Deposit date:2022-12-15
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4PGB
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BU of 4pgb by Molmil
MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGNWPAL
Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-B alpha chain, ...
Authors:Celie, P.H.N, Joosten, R.P, Perrakis, A, Neefjes, J.
Deposit date:2014-05-01
Release date:2015-01-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The first step of peptide selection in antigen presentation by MHC class I molecules.
Proc.Natl.Acad.Sci.USA, 112, 2015
5E5A
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BU of 5e5a by Molmil
Crystal structure of the chromatin-tethering domain of Human cytomegalovirus IE1 protein bound to the nucleosome core particle
Descriptor: C-terminal domain of Regulatory protein IE1, DNA (146-MER), Histone H2A, ...
Authors:Fang, Q, Chen, P, Wang, M, Fang, J, Yang, N, Li, G, Xu, R.M.
Deposit date:2015-10-08
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Human cytomegalovirus IE1 protein alters the higher-order chromatin structure by targeting the acidic patch of the nucleosome
Elife, 5, 2016
5E65
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BU of 5e65 by Molmil
The complex structure of Hemagglutinin-esterase-fusion mutant protein from the influenza D virus with receptor analog 9-O-Ac-3'SLN (Tr322)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-3)-beta-D-galactopyranose, ...
Authors:Song, H, Qi, J, Shi, Y, Gao, G.F.
Deposit date:2015-10-09
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
PLoS Pathog., 12, 2016
1AO4
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BU of 1ao4 by Molmil
COBALT(III)-PEPLOMYCIN COMPLEX DETERMINED BY NMR STUDIES
Descriptor: 3-O-carbamoyl-alpha-D-mannopyranose-(1-2)-alpha-L-gulopyranose, AGLYCON OF PEPLOMYCIN, COBALT (III) ION, ...
Authors:Caceres-Cortes, J, Sugiyama, H, Ikudome, K, Saito, I, Wang, A.H.-J.
Deposit date:1997-07-16
Release date:1999-07-30
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structures of cobalt(III)-pepleomycin and cobalt(III)-deglycopepleomycin (green forms) determined by NMR studies.
Eur.J.Biochem., 244, 1997
5E79
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BU of 5e79 by Molmil
Macromolecular diffractive imaging using imperfect crystals
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Ayyer, K, Yefanov, O, Oberthur, D, Roy-Chowdhury, S, Galli, L, Mariani, V, Basu, S, Coe, J, Conrad, C.E, Fromme, R, Schaffer, A, Dorner, K, James, D, Kupitz, C, Metz, M, Nelson, G, Xavier, P.L, Beyerlein, K.R, Schmidt, M, Sarrou, I, Spence, J.C.H, Weierstall, U, White, T.A, Yang, J.-H, Zhao, Y, Liang, M, Aquila, A, Hunter, M.S, Koglin, J.E, Boutet, S, Fromme, P, Barty, A, Chapman, H.N.
Deposit date:2015-10-12
Release date:2017-02-08
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Macromolecular diffractive imaging using imperfect crystals.
Nature, 530, 2016
5E86
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BU of 5e86 by Molmil
isolated SBD of BiP with loop34 modification
Descriptor: 78 kDa glucose-regulated protein
Authors:Liu, Q, Yang, J, Nune, M, Zong, Y, Zhou, L.
Deposit date:2015-10-13
Release date:2015-12-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.681 Å)
Cite:Close and Allosteric Opening of the Polypeptide-Binding Site in a Human Hsp70 Chaperone BiP.
Structure, 23, 2015

224004

數據於2024-08-21公開中

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