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PDB: 42908 results

8XFI
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High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine E bound (crystal form 2)
Descriptor: (8E)-6,17,28-trihydroxy-1,6,12,17,23,28-hexaazacyclotritriacont-8-ene-2,5,13,16,24,27-hexone, CHLORIDE ION, FE (III) ION, ...
Authors:Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
Deposit date:2023-12-13
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes
Structure
8XEU
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Structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrichrome bound
Descriptor: FERRICHROME, Iron-hydroxamate ABC transporter substrate-binding protein FtsB
Authors:Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
Deposit date:2023-12-13
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes
Structure
2RMY
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BU of 2rmy by Molmil
Structure of the N-terminal BARpeptide in SDS micelles
Descriptor: Myc box-dependent-interacting protein 1
Authors:Loew, C, Weininger, U, Balbach, J.
Deposit date:2007-12-03
Release date:2008-10-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and dynamics of helix-0 of the N-BAR domain in lipid micelles and bilayers
Biophys.J., 95, 2008
8XF4
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BU of 8xf4 by Molmil
Structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with Bisucaberin bound
Descriptor: 1,12-bis(oxidanyl)-1,6,12,17-tetrazacyclodocosane-2,5,13,16-tetrone, FE (III) ION, Iron-hydroxamate ABC transporter substrate-binding protein FtsB
Authors:Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K.
Deposit date:2023-12-13
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes
Structure
2RPK
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BU of 2rpk by Molmil
Solution Structure of Domain II of the Positive Polarity CCHMVD Hammerhead Ribozyme
Descriptor: RNA (5'-R(*GP*GP*GP*AP*UP*CP*CP*AP*UP*GP*AP*CP*AP*GP*GP*AP*UP*CP*CP*C)-3')
Authors:Gallego, J, Dufour, D, de la Pena, M, Gago, S, Flores, R.
Deposit date:2008-05-28
Release date:2008-12-30
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure-function analysis of the ribozymes of chrysanthemum chlorotic mottle viroid: a loop-loop interaction motif conserved in most natural hammerheads
Nucleic Acids Res., 37, 2009
8WPC
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BU of 8wpc by Molmil
Complex structure of AtHPPD with LB553
Descriptor: (2R)-3-[2,4-bis(chloranyl)-3-methyl-phenyl]carbonyl-1-cyclopropyl-2-methyl-4-oxidanyl-2H-pyrrol-5-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-10-09
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Complex structure of AtHPPD with LB553
To Be Published
8TBA
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BU of 8tba by Molmil
Crystal structure of Helicobacter pylori glutamate racemase bound to D-glutamate and a crystallographic artifact
Descriptor: (2M)-N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)-2-[5-(4-methylphenyl)-1,3-oxazol-2-yl]benzamide, D-GLUTAMIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Propp, J, Spies, M.A.
Deposit date:2023-06-28
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Helicobacter pylori glutamate racemase bound to D-glutamate and a likely crystallographic artifact
To Be Published
2ROE
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BU of 2roe by Molmil
Solution structure of thermus thermophilus HB8 TTHA1718 protein in vitro
Descriptor: Heavy metal binding protein
Authors:Sakakibara, D, Sasaki, A, Ikeya, T, Hamatsu, J, Koyama, H, Mishima, M, Mikawa, T, Waelchli, M, Smith, B.O, Shirakawa, M, Guentert, P, Ito, Y.
Deposit date:2008-03-20
Release date:2009-03-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Protein structure determination in living cells by in-cell NMR spectroscopy
Nature, 458, 2009
8TSO
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BU of 8tso by Molmil
KDL bound, nucleotide-free MsbA in open, outward-facing conformation
Descriptor: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-binding transport protein MsbA, PENTAETHYLENE GLYCOL MONODECYL ETHER
Authors:Yang, B, Zhang, T, Lyu, J, Laganowsky, A.D, Zhao, M.
Deposit date:2023-08-11
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Native mass spectrometry captures snapshots of the MsbA transport cycle
To Be Published
3QJZ
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BU of 3qjz by Molmil
Crystal structure of PI3K-gamma in complex with benzothiazole 1
Descriptor: N-{6-[2-(methylsulfanyl)pyrimidin-4-yl]-1,3-benzothiazol-2-yl}acetamide, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma isoform, SULFATE ION
Authors:Whittington, D.A, Tang, J, Yakowec, P.
Deposit date:2011-01-31
Release date:2011-03-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discovery and Optimization of a Series of Benzothiazole Phosphoinositide 3-Kinase (PI3K)/Mammalian Target of Rapamycin (mTOR) Dual Inhibitors.
J.Med.Chem., 54, 2011
2HN2
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BU of 2hn2 by Molmil
Crystal structure of the CorA Mg2+ transporter homologue from T. maritima in complex with divalent cations
Descriptor: CALCIUM ION, Magnesium transport protein corA
Authors:Payandeh, J, Pai, E.F.
Deposit date:2006-07-11
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:A structural basis for Mg(2+) homeostasis and the CorA translocation cycle.
Embo J., 25, 2006
2HNY
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BU of 2hny by Molmil
Crystal Structure of E138K Mutant HIV-1 Reverse Transcriptase in Complex with Nevirapine
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Ren, J, Nichols, C.E, Stamp, A, Chamberlain, P.P, Stammers, D.K.
Deposit date:2006-07-13
Release date:2006-09-05
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into mechanisms of non-nucleoside drug resistance for HIV-1 reverse transcriptases mutated at codons 101 or 138.
Febs J., 273, 2006
9AVA
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BU of 9ava by Molmil
Co-crystal structure of human TREX1 in complex with an inhibitor
Descriptor: (2R)-2-[(5R,6S,8R,9aS)-8-amino-1-oxo-5-(2-phenylethyl)hexahydro-1H-pyrrolo[1,2-a][1,4]diazepin-2(3H)-yl]-N-[(3,4-dichlorophenyl)methyl]-4-methylpentanamide, POTASSIUM ION, Three-prime repair exonuclease 1, ...
Authors:Dehghani-Tafti, S, Dong, A, Li, Y, Xu, J, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2024-03-01
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Co-crystal structure of human TREX1 in complex with an inhibitor
To be published
8TEG
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BU of 8teg by Molmil
Cryo-EM structure of Arabidopsis thaliana Bor1 in lipid nanodiscs (protomer-focused refinement)
Descriptor: Boron transporter 1
Authors:Jiang, Y, Jiang, J.
Deposit date:2023-07-06
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.15 Å)
Cite:Structure of borate transporter Bor1 reveals a novel auto-inhibition mechanism for the SLC4 family
To Be Published
3K26
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BU of 3k26 by Molmil
Complex structure of EED and trimethylated H3K4
Descriptor: HISTONE PEPTIDE, Polycomb protein EED
Authors:Bian, C.B, Xu, C, Qiu, W, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2009-09-29
Release date:2009-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Binding of different histone marks differentially regulates the activity and specificity of polycomb repressive complex 2 (PRC2).
Proc.Natl.Acad.Sci.USA, 107, 2010
8TWP
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BU of 8twp by Molmil
Influenza A virus (A/Aichi/2/1968(H3N2) nucleoprotein mutant - 2-7 deleted, R416A
Descriptor: Nucleoprotein
Authors:Yoon, J, Zhang, Y.M, Grant, R.A, Shoulders, M.D.
Deposit date:2023-08-21
Release date:2024-07-03
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The immune-evasive proline-283 substitution in influenza nucleoprotein increases aggregation propensity without altering the native structure.
Sci Adv, 10, 2024
8TEL
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BU of 8tel by Molmil
Cryo-EM structure of Arabidopsis thaliana Bor1 mutant (R637E/E641R/R643E) in the occluded conformation in lauryl maltose neopentyl glycol (LMNG)
Descriptor: Boron transporter 1
Authors:Jiang, Y, Jiang, J.
Deposit date:2023-07-06
Release date:2024-07-10
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Structure of borate transporter Bor1 reveals a novel auto-inhibition mechanism for the SLC4 family
To Be Published
8TEJ
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BU of 8tej by Molmil
Cryo-EM structure of Arabidopsis thaliana Bor1 mutant (R637E/E641R/R643E) in the occluded conformation in lauryl maltose neopentyl glycol (LMNG) (protomer-focused refinement)
Descriptor: Boron transporter 1
Authors:Jiang, Y, Jiang, J.
Deposit date:2023-07-06
Release date:2024-07-10
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Structure of borate transporter Bor1 reveals a novel auto-inhibition mechanism for the SLC4 family
To Be Published
8YKX
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BU of 8ykx by Molmil
Cryo-EM structure of succinate receptor SUCR1 bound to maleic acid
Descriptor: Antibody fragment ScFv16, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Li, C, Liu, H, Li, J, Zhu, H, Fu, W, Xu, H.E.
Deposit date:2024-03-05
Release date:2024-05-29
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Molecular basis of ligand recognition and activation of the human succinate receptor SUCR1.
Cell Res., 34, 2024
8TEH
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BU of 8teh by Molmil
Cryo-EM structure of Arabidopsis thaliana Bor1 in lipid nanodiscs
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Boron transporter 1
Authors:Jiang, Y, Jiang, J.
Deposit date:2023-07-06
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Structure of borate transporter Bor1 reveals a novel auto-inhibition mechanism for the SLC4 family
To Be Published
4MXW
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BU of 4mxw by Molmil
Structure of heterotrimeric lymphotoxin LTa1b2 bound to lymphotoxin beta receptor LTbR and anti-LTa Fab
Descriptor: Lymphotoxin-alpha, Lymphotoxin-beta, Tumor necrosis factor receptor superfamily member 3, ...
Authors:Sudhamsu, J, Yin, J.P, Hymowitz, S.G.
Deposit date:2013-09-26
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Dimerization of LT beta R by LT alpha 1 beta 2 is necessary and sufficient for signal transduction.
Proc.Natl.Acad.Sci.USA, 110, 2013
3T7I
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BU of 3t7i by Molmil
Crystal structure of Se-Met Rtt107p (residues 820-1070)
Descriptor: Regulator of Ty1 transposition protein 107
Authors:Li, X, Li, F, Wu, J, Shi, Y.
Deposit date:2011-07-30
Release date:2012-02-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
8TEI
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BU of 8tei by Molmil
Cryo-EM structure of Arabidopsis thaliana Bor1 in lauryl maltose neopentyl glycol (LMNG)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, Boron transporter 1
Authors:Jiang, Y, Jiang, J.
Deposit date:2023-07-06
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Structure of borate transporter Bor1 reveals a novel auto-inhibition mechanism for the SLC4 family
To Be Published
8TEM
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BU of 8tem by Molmil
Cryo-EM structure of Arabidopsis thaliana Bor1 mutant (R637E/E641R/R643E) in the inward-facing conformation in lauryl maltose neopentyl glycol (LMNG)
Descriptor: Boron transporter 1
Authors:Jiang, Y, Jiang, J.
Deposit date:2023-07-06
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (3.02 Å)
Cite:Structure of borate transporter Bor1 reveals a novel auto-inhibition mechanism for the SLC4 family
To Be Published
2MZJ
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BU of 2mzj by Molmil
NMR-structure of the Nop6-RBD from S. cerevisiae
Descriptor: Nucleolar protein 6
Authors:Wurm, J, Lioutikov, A, Koetter, P, Entian, K, Woehnert, J.
Deposit date:2015-02-14
Release date:2016-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Not known yet
To be Published

226414

数据于2024-10-23公开中

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