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PDB: 42254 results

4A15
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BU of 4a15 by Molmil
Crystal structure of an XPD DNA complex
Descriptor: 5'-D(*DTP*AP*CP*GP)-3', ATP-DEPENDENT DNA HELICASE TA0057, CALCIUM ION, ...
Authors:Kuper, J, Wolski, S.C, Michels, G, Kisker, C.
Deposit date:2011-09-14
Release date:2012-02-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional and Structural Studies of the Nucleotide Excision Repair Helicase Xpd Suggest a Polarity for DNA Translocation.
Embo J., 31, 2011
6CSD
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BU of 6csd by Molmil
V308E mutant of cytochrome P450 2D6 complexed with prinomastat
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, Cytochrome P450 2D6, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Yang, Y.T, Fujita, K, Wang, P.F, Im, S.C, Pearl, N.M, Meagher, J, Stuckey, J, Waskell, L.
Deposit date:2018-03-20
Release date:2019-03-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.391 Å)
Cite:Characteristic conformational changes on the distal and proximal surfaces of cytochrome P450 2D6 in response to substrate binding
To Be Published
5CH8
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BU of 5ch8 by Molmil
Crystal structure of MDLA N225Q mutant form Penicillium cyclopium
Descriptor: CHLORIDE ION, GLYCEROL, Mono- and diacylglycerol lipase, ...
Authors:Xu, J, Xu, H, Hou, S, Liu, J.
Deposit date:2015-07-10
Release date:2016-04-20
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Lipase-Driven Epoxidation Is A Two-Stage Synergistic Process
ChemistrySelect, 4, 2016
2WD5
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BU of 2wd5 by Molmil
SMC hinge heterodimer (Mouse)
Descriptor: STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 1A, STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Authors:Michie, K.A, Haering, C.H, Nasmyth, K, Lowe, J.
Deposit date:2009-03-20
Release date:2010-08-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Positively Charged Channel within the Smc1/Smc3 Hinge Required for Sister Chromatid Cohesion.
Embo J., 30, 2011
6K9K
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BU of 6k9k by Molmil
Monomeric human ATM (Ataxia telangiectasia mutated) kinase
Descriptor: Serine-protein kinase ATM
Authors:Xiao, J, Liu, M, Qi, Y, Yuriy, C, Zhang, P, Xu, Y.
Deposit date:2019-06-16
Release date:2019-12-25
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (7.82 Å)
Cite:Structural insights into the activation of ATM kinase.
Cell Res., 29, 2019
7WU7
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BU of 7wu7 by Molmil
Prefoldin-tubulin-TRiC complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Prefoldin subunit 1, Prefoldin subunit 2, ...
Authors:Gestaut, D, Zhao, Y, Park, J, Ma, B, Leitner, A, Collier, M, Pintilie, G, Roh, S.-H, Chiu, W, Frydman, J.
Deposit date:2022-02-07
Release date:2022-12-21
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
2WJV
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BU of 2wjv by Molmil
Crystal structure of the complex between human nonsense mediated decay factors UPF1 and UPF2
Descriptor: REGULATOR OF NONSENSE TRANSCRIPTS 1, REGULATOR OF NONSENSE TRANSCRIPTS 2, SULFATE ION, ...
Authors:Clerici, M, Mourao, A, Gutsche, I, Gehring, N.H, Hentze, M.W, Kulozik, A, Kadlec, J, Sattler, M, Cusack, S.
Deposit date:2009-06-01
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Unusual Bipartite Mode of Interaction between the Nonsense-Mediated Decay Factors, Upf1 and Upf2.
Embo J., 28, 2009
7WQI
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BU of 7wqi by Molmil
Crystal structure of SARS coronavirus main protease in complex with PF07304814
Descriptor: 3C-like proteinase, [(3~{S})-3-[[(2~{S})-2-[(4-methoxy-1~{H}-indol-2-yl)carbonylamino]-4-methyl-pentanoyl]amino]-2-oxidanylidene-4-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]butyl] dihydrogen phosphate
Authors:Lin, C, Zhong, F.L, Zhou, X.L, Zeng, P, Zhang, J, Li, J.
Deposit date:2022-01-25
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of SARS coronavirus main protease in complex with PF07304814
To Be Published
6KA2
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BU of 6ka2 by Molmil
Crystal structure of a Thebaine synthase from Papaver somniferum in complex with TBN
Descriptor: (4R,7aR,12bS)-7,9-dimethoxy-3-methyl-2,4,7a,13-tetrahydro-1H-4,12-methanobenzofuro[3,2-e]isoquinoline, Thebaine synthase 2
Authors:Xue, J, Yu, X.J, Huang, J.W, Liu, W.D, Chen, C.C, Guo, R.T.
Deposit date:2019-06-20
Release date:2020-06-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into thebaine synthase 2 catalysis.
Biochem.Biophys.Res.Commun., 529, 2020
3T10
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BU of 3t10 by Molmil
HSP90 N-terminal domain bound to ACP
Descriptor: Heat shock protein HSP 90-alpha, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Li, J.
Deposit date:2011-07-21
Release date:2012-01-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Structure insights into mechanisms of ATP hydrolysis and the activation of human heat-shock protein 90.
Acta Biochim Biophys Sin (Shanghai), 44, 2012
2WNJ
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BU of 2wnj by Molmil
CRYSTAL STRUCTURE OF APLYSIA ACHBP IN COMPLEX WITH DMXBA
Descriptor: (3E)-3-[(2,4-DIMETHOXYPHENYL)METHYLIDENE]-3,4,5,6-TETRAHYDRO-2,3'-BIPYRIDINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, SOLUBLE ACETYLCHOLINE RECEPTOR, ...
Authors:Sulzenbacher, G, Hibbs, R, Shi, J, Talley, T, Conrod, S, Kem, W, Taylor, P, Marchot, P, Bourne, Y.
Deposit date:2009-07-09
Release date:2009-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Determinants for Interaction of Partial Agonists with Acetylcholine Binding Protein and Neuronal Alpha7 Nicotinic Acetylcholine Receptor.
Embo J., 28, 2009
4BJ8
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BU of 4bj8 by Molmil
Zebavidin
Descriptor: BIOTIN, GLYCEROL, ZEBAVIDIN
Authors:Airenne, T.T, Parthiban, M, Niederhauser, B, Zmurko, J, Kulomaa, M.S, Hytonen, V.P, Johnson, M.S.
Deposit date:2013-04-17
Release date:2013-11-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Zebavidin
Plos One, 8, 2013
4PJD
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BU of 4pjd by Molmil
Structure of human MR1-5-OP-RU in complex with human MAIT C-C10 TCR
Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, GLYCEROL, ...
Authors:Birkinshaw, R.W, Rossjohn, J.
Deposit date:2014-05-12
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:A molecular basis underpinning the T cell receptor heterogeneity of mucosal-associated invariant T cells.
J.Exp.Med., 211, 2014
3WWC
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BU of 3wwc by Molmil
The complex of pOPH_S172A of pNPB
Descriptor: CITRIC ACID, Oxidized polyvinyl alcohol hydrolase, butanoic acid
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
Deposit date:2014-06-17
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
4PLJ
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BU of 4plj by Molmil
Hepatitis E Virus E2s domain (Genotype IV) in complex with a neutralizing antibody 8G12
Descriptor: 8G12 heavy chain, 8G12 light chain, Capsid protein
Authors:Tang, X.H, Li, S.W, Sivaraman, J.
Deposit date:2014-05-18
Release date:2015-04-15
Last modified:2015-05-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the neutralization of hepatitis E virus by a cross-genotype antibody
Cell Res., 25, 2015
6K2Y
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BU of 6k2y by Molmil
Human Galectin-14
Descriptor: Placental protein 13-like
Authors:Su, J.
Deposit date:2019-05-15
Release date:2020-06-17
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structure-function studies of galectin-14, an important effector molecule in embryology.
Febs J., 288, 2021
2WUK
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BU of 2wuk by Molmil
DivIVA N-terminal domain, F17A mutant
Descriptor: SEPTUM SITE-DETERMINING PROTEIN DIVIVA
Authors:Oliva, M.A, Leonard, T.A, Lowe, J.
Deposit date:2009-10-06
Release date:2010-06-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Features Critical for Membrane Binding Revealed by Diviva Crystal Structure.
Embo J., 29, 2010
5BS0
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BU of 5bs0 by Molmil
MAGE-A3 Reactive TCR in complex with Titin Epitope in HLA-A1
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Raman, M.C.C, Rizkallah, P.J, Simmons, R, Donellan, Z, Dukes, J, Bossi, G, LeProvost, G, Mahon, T, Hickman, E, Lomax, M, Oates, J, Hassan, N, Vuidepot, A, Sami, M, Cole, D.K, Jakobsen, B.K.
Deposit date:2015-06-01
Release date:2016-03-02
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Direct molecular mimicry enables off-target cardiovascular toxicity by an enhanced affinity TCR designed for cancer immunotherapy.
Sci Rep, 6, 2016
4PHU
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BU of 4phu by Molmil
Crystal structure of Human GPR40 bound to allosteric agonist TAK-875
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, DIMETHYL SULFOXIDE, Free fatty acid receptor 1,Lysozyme, ...
Authors:Srivastava, A, Yano, J.K, Hirozane, Y, Kefala, G, Snell, G, Lane, W, Gruswitz, F, Ivetac, A, Aertgeerts, K, Nguyen, J, Jennings, A, Okada, K.
Deposit date:2014-05-07
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.332 Å)
Cite:High-resolution structure of the human GPR40 receptor bound to allosteric agonist TAK-875.
Nature, 513, 2014
3WWD
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BU of 3wwd by Molmil
The complex of pOPH_S172C with DMSO
Descriptor: CITRIC ACID, DIMETHYL SULFOXIDE, Oxidized polyvinyl alcohol hydrolase
Authors:Yang, Y, Ko, T.P, Li, J.H, Liu, L, Huang, C.H, Chen, J, Guo, R.T, Du, G.C.
Deposit date:2014-06-17
Release date:2015-04-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Roles of tryptophan residue and disulfide bond in the variable lid region of oxidized polyvinyl alcohol hydrolase
Biochem.Biophys.Res.Commun., 452, 2014
6K0J
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BU of 6k0j by Molmil
The co-crystal structure of DYRK2 with a small molecule inhibitor
Descriptor: 3-(2,7-dimethoxyacridin-9-yl)sulfanylpropan-1-amine, Dual specificity tyrosine-phosphorylation-regulated kinase 2
Authors:Tiantian, W, Xiao, J.
Deposit date:2019-05-06
Release date:2019-11-20
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.352 Å)
Cite:Inhibition of dual-specificity tyrosine phosphorylation-regulated kinase 2 perturbs 26S proteasome-addicted neoplastic progression.
Proc.Natl.Acad.Sci.USA, 116, 2019
6K0P
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BU of 6k0p by Molmil
Catalytic domain of GH87 alpha-1,3-glucanase D1045A in complex with nigerose
Descriptor: ACETIC ACID, Alpha-1,3-glucanase, CALCIUM ION, ...
Authors:Itoh, T, Intuy, R, Suyotha, W, Hayashi, J, Yano, S, Makabe, K, Wakayama, M, Hibi, T.
Deposit date:2019-05-07
Release date:2019-12-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.424 Å)
Cite:Structural insights into substrate recognition and catalysis by glycoside hydrolase family 87 alpha-1,3-glucanase from Paenibacillus glycanilyticus FH11.
Febs J., 287, 2020
4PJC
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BU of 4pjc by Molmil
Structure of human MR1-5-OP-RU in complex with human MAIT C-A11 TCR
Descriptor: 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-2-microglobulin, ...
Authors:Birkinshaw, R.W, Rossjohn, J.
Deposit date:2014-05-12
Release date:2014-07-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A molecular basis underpinning the T cell receptor heterogeneity of mucosal-associated invariant T cells.
J.Exp.Med., 211, 2014
6CW3
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BU of 6cw3 by Molmil
Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 2
Descriptor: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
Authors:Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
Deposit date:2018-03-29
Release date:2018-09-19
Last modified:2020-03-04
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4S35
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BU of 4s35 by Molmil
AMPPCP and TMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Biswas, A, Jeyakanthan, J, Sekar, K, Kuramitsu, S, Yokoyama, S.
Deposit date:2015-01-26
Release date:2016-01-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural studies of a hyperthermophilic thymidylate kinase enzyme reveal conformational substates along the reaction coordinate.
Febs J., 284, 2017

222415

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