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PDB: 42550 件

5GIR
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BU of 5gir by Molmil
Crystal structure of a Fab fragment with its ligand peptide
分子名称: 1,2-ETHANEDIOL, Heavy chain of Fab fragment, LYS-PRO-ILE-ILE-ILE-GLY-SER-HIS-ALA-TYR-GLY-ASP, ...
著者Kitago, Y, Kaneko, K.K, Ogasawara, S, Kato, Y, Takagi, J.
登録日2016-06-24
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural basis for multi-specific peptide recognition by the anti-IDH1/2 monoclonal antibody, MsMab-1.
Biochem. Biophys. Res. Commun., 478, 2016
4PWZ
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BU of 4pwz by Molmil
Crystal structure of TolB protein from Yersinia pestis CO92
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Maltseva, N, Kim, Y, Osipiuk, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2014-03-21
公開日2014-04-02
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.732 Å)
主引用文献Crystal structure of TolB protein from Yersinia pestis CO92
To be Published
4PYQ
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BU of 4pyq by Molmil
Humanized rat apo-COMT in complex with a ureido-benzamidine
分子名称: 4-({[3-(aminomethyl)phenyl]carbamoyl}amino)benzenecarboximidamide, ACETATE ION, CHLORIDE ION, ...
著者Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
登録日2014-03-27
公開日2014-06-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
4PVR
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BU of 4pvr by Molmil
Crystal structure of partially-cleaved human l-asparaginase protein in complex with l-aspartate
分子名称: ASPARTIC ACID, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
著者Nomme, J, Lavie, A.
登録日2014-03-18
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
4PZT
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BU of 4pzt by Molmil
Crystal structure of p300 histone acetyltransferase domain in complex with an inhibitor, Acetonyl-Coenzyme A
分子名称: DIMETHYL SULFOXIDE, Histone acetyltransferase p300, [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3-HYDROXY-2,2-DIMETHYL-4-OXO-4-{[3-OXO-3-({2-[(2-OXOPROPYL)THIO]ETHYL}AMINO)PROPYL]AMINO}BUTYL DIHYDROGEN DIPHOSPHATE
著者Maksimoska, J, Marmorstein, R.
登録日2014-03-31
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the p300 Histone Acetyltransferase Bound to Acetyl-Coenzyme A and Its Analogues.
Biochemistry, 53, 2014
4Q02
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BU of 4q02 by Molmil
Second-site screening of K-Ras in the presence of covalently attached first-site ligands
分子名称: 3,4-difluorobenzenethiol, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
著者Sun, Q, Phan, J, Friberg, A, Camper, D.V, Olejniczak, E.T, Fesik, S.W.
登録日2014-03-31
公開日2014-09-10
実験手法X-RAY DIFFRACTION (1.702 Å)
主引用文献A method for the second-site screening of K-Ras in the presence of a covalently attached first-site ligand.
J.Biomol.Nmr, 60, 2014
5GTE
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BU of 5gte by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS), solute-free form
分子名称: Lachrymatory-factor synthase, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Takabe, J, Arakawa, T, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
登録日2016-08-20
公開日2017-08-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
4PXT
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BU of 4pxt by Molmil
Structural basis for the assembly of the mitotic motor kinesin-5 into bipolar tetramers
分子名称: Bipolar kinesin KRP-130
著者Scholey, J.E, Nithianantham, S, Scholey, J.M, Al-Bassam, J.
登録日2014-03-25
公開日2014-04-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for the assembly of the mitotic motor Kinesin-5 into bipolar tetramers.
Elife, 3, 2014
5GJJ
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BU of 5gjj by Molmil
Glutathionylated hHsp70 SBD
分子名称: Heat shock 70 kDa protein 1A
著者Gong, W.B, Yang, J, Zhang, H, Perrett, S.
登録日2016-06-30
公開日2017-07-05
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure of glutathionylated hHsp70 SBD (385-641)
To Be Published
4PY0
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BU of 4py0 by Molmil
Crystal structure of P2Y12 receptor in complex with 2MeSATP
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-(methylsulfanyl)adenosine 5'-(tetrahydrogen triphosphate), P2Y purinoceptor 12, ...
著者Zhang, J, Zhang, K, Gao, Z.G, Paoletta, S, Zhang, D, Han, G.W, Li, T, Ma, L, Zhang, W, Muller, C.E, Yang, H, Jiang, H, Cherezov, V, Katritch, V, Jacobson, K.A, Stevens, R.C, Wu, B, Zhao, Q, GPCR Network (GPCR)
登録日2014-03-25
公開日2014-04-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Agonist-bound structure of the human P2Y12 receptor
Nature, 509, 2014
4PYJ
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BU of 4pyj by Molmil
human apo-COMT, single domain swap
分子名称: CHLORIDE ION, Catechol O-methyltransferase, MAGNESIUM ION, ...
著者Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
登録日2014-03-27
公開日2014-06-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
4PYO
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BU of 4pyo by Molmil
Humanized rat COMT bound to SAH, semi-holo form
分子名称: Catechol O-methyltransferase, MAGNESIUM ION, POTASSIUM ION, ...
著者Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
登録日2014-03-27
公開日2014-06-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
1ZUZ
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BU of 1zuz by Molmil
Calmodulin in complex with a mutant peptide from human DRP-1 kinase
分子名称: CALCIUM ION, DRP-1 kinase, calmodulin
著者Kursula, P, Vahokoski, J, Wilmanns, M.
登録日2005-06-01
公開日2006-11-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Recognition of human death-associated protein kinases by calmodulin
To be Published
4Q58
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BU of 4q58 by Molmil
Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex
分子名称: Integrin beta-4, Plectin
著者Song, J.-G, Kostan, J, Grishkovskaya, I, Djinovic-Carugo, K.
登録日2014-04-16
公開日2014-07-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.001 Å)
主引用文献Crystal structure of the plectin 1a actin-binding domain/integrin beta 4 fragment complex
To be Published
4Q5V
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BU of 4q5v by Molmil
Crystal structure of the catalytic core of human DNA polymerase alpha in ternary complex with an RNA-primed DNA template and aphidicolin
分子名称: (3R,4R,4aR,6aS,8R,9R,11aS,11bS)-4,9-bis(hydroxymethyl)-4,11b-dimethyltetradecahydro-8,11a-methanocyclohepta[a]naphthale ne-3,9-diol, DNA polymerase alpha catalytic subunit, DNA template, ...
著者Baranovskiy, A.G, Babayeva, N.D, Suwa, Y, Gu, J, Tahirov, T.H.
登録日2014-04-17
公開日2014-11-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structural basis for inhibition of DNA replication by aphidicolin.
Nucleic Acids Res., 42, 2014
4PVS
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BU of 4pvs by Molmil
Crystal structure of fully-cleaved human l-asparaginase protein in complex with l-aspartate
分子名称: ASPARTIC ACID, Isoaspartyl peptidase/L-asparaginase, SODIUM ION
著者Nomme, J, Lavie, A.
登録日2014-03-18
公開日2014-03-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structures of apo and product-bound human L-asparaginase: insights into the mechanism of autoproteolysis and substrate hydrolysis.
Biochemistry, 51, 2012
4PWS
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BU of 4pws by Molmil
Crystal structure of secreted proline rich antigen MTC28 (Rv0040c) at 2.15 A with bound chloride from Mycobacterium tuberculosis
分子名称: CHLORIDE ION, Proline-rich 28 kDa antigen
著者Kundu, P, Biswas, R, Mukherjee, S, Reinhard, L, Mueller-dieckmann, J, Weiss, M.S, Das, A.K.
登録日2014-03-21
公開日2015-03-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure-based Epitope Mapping of Mycobacterium tuberculosis Secretary Antigen MTC28
J.Biol.Chem., 291, 2016
5W2W
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BU of 5w2w by Molmil
INFLUENZA VIRUS NEURAMINIDASE N9 IN COMPLEX WITH 8-DEOXYGENATED 2,3-DIFLUORO-N-ACETYLNEURAMINIC ACID
分子名称: (2R,3R,4R,5R,6R)-5-acetamido-6-[(1R)-1,3-bis(oxidanyl)propyl]-2,3-bis(fluoranyl)-4-oxidanyl-oxane-2-carboxylic acid, (2~{R},3~{R},4~{R},5~{R})-3-acetamido-2-[(1~{R})-1,3-bis(oxidanyl)propyl]-5-fluoranyl-4-oxidanyl-2,3,4,5-tetrahydropyran-1-ium-6-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Streltsov, V.A, Mckimm-Breschkin, J, Barrett, S, Pilling, P, Hader, S, Watt, A.G.
登録日2017-06-07
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and Functional Analysis of Anti-Influenza Activity of 4-, 7-, 8- and 9-Deoxygenated 2,3-Difluoro- N-acetylneuraminic Acid Derivatives.
J. Med. Chem., 61, 2018
3RQ4
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BU of 3rq4 by Molmil
Crystal structure of suppressor of variegation 4-20 homolog 2
分子名称: 1,2-ETHANEDIOL, Histone-lysine N-methyltransferase SUV420H2, S-ADENOSYLMETHIONINE, ...
著者Dong, A, Zeng, H, Tempel, W, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Wu, H, Structural Genomics Consortium (SGC)
登録日2011-04-27
公開日2011-06-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of the human histone H4K20 methyltransferases SUV420H1 and SUV420H2.
Febs Lett., 587, 2013
1YCB
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BU of 1ycb by Molmil
DISTAL POCKET POLARITY IN LIGAND BINDING TO MYOGLOBIN: DEOXY AND CARBONMONOXY FORMS OF A THREONINE68 (E11) MUTANT INVESTIGATED BY X-RAY CRYSTALLOGRAPHY AND INFRARED SPECTROSCOPY
分子名称: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
著者Cameron, A.D, Smerdon, S.J, Wilkinson, A.J, Habash, J, Helliwell, J.R.
登録日1993-08-10
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Distal pocket polarity in ligand binding to myoglobin: deoxy and carbonmonoxy forms of a threonine68(E11) mutant investigated by X-ray crystallography and infrared spectroscopy.
Biochemistry, 32, 1993
3MAC
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BU of 3mac by Molmil
crystal structure of GP41-derived protein complexed with fab 8062
分子名称: Fab8062, Transmembrane glycoprotein
著者Li, M, Gustchina, E, Louis, J, Gustchina, A, Wlodawer, A, Clore, M.
登録日2010-03-23
公開日2010-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis of HIV-1 Neutralization by Affinity Matured Fabs Directed against the Internal Trimeric Coiled-Coil of gp41.
Plos Pathog., 6, 2010
4TTC
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BU of 4ttc by Molmil
Crystal structure of homo sapiens IODOTYROSINE DEIODINASE bound to FMN and mono-iodotyrosine (MIT)
分子名称: 3-IODO-TYROSINE, FLAVIN MONONUCLEOTIDE, Iodotyrosine dehalogenase 1
著者Chuenchor, W, Hu, J, Rokita, S.
登録日2014-06-20
公開日2014-11-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Switch between One- and Two-electron Chemistry of the Human Flavoprotein Iodotyrosine Deiodinase Is Controlled by Substrate.
J.Biol.Chem., 290, 2015
1YCA
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BU of 1yca by Molmil
DISTAL POCKET POLARITY IN LIGAND BINDING TO MYOGLOBIN: DEOXY AND CARBONMONOXY FORMS OF A THREONINE68 (E11) MUTANT INVESTIGATED BY X-RAY CRYSTALLOGRAPHY AND INFRARED SPECTROSCOPY
分子名称: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
著者Cameron, A.D, Smerdon, S.J, Wilkinson, A.J, Habash, J, Helliwell, J.R.
登録日1993-08-10
公開日1994-01-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Distal pocket polarity in ligand binding to myoglobin: deoxy and carbonmonoxy forms of a threonine68(E11) mutant investigated by X-ray crystallography and infrared spectroscopy.
Biochemistry, 32, 1993
4RS8
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BU of 4rs8 by Molmil
Apo structure of novel pNOB8 plasmid centromere binding protein
分子名称: AspA
著者Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
登録日2014-11-07
公開日2015-09-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
4RL6
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BU of 4rl6 by Molmil
Crystal Structure of the Q04L03_STRP2 protein from Streptococcus pneumoniae. Northeast Structural Genomics Consortium Target SpR105
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Saccharopine dehydrogenase
著者Vorobiev, S, Neely, H.M, Odukwe, C.D, Seetharaman, J, Mao, L, Xiao, R, Kohan, E, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2014-10-15
公開日2014-11-05
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal Structure of the Q04L03_STRP2 protein from Streptococcus pneumoniae.
To be Published

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