Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 件

1Z1V
DownloadVisualize
BU of 1z1v by Molmil
NMR structure of the Saccharomyces cerevisiae Ste50 SAM domain
分子名称: STE50 protein
著者Kwan, J.J, Warner, N, Maini, J, Pawson, T, Donaldson, L.W.
登録日2005-03-06
公開日2006-02-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Saccharomyces cerevisiae Ste50 binds the MAPKKK Ste11 through a head-to-tail SAM domain interaction.
J.Mol.Biol., 356, 2006
1YVZ
DownloadVisualize
BU of 1yvz by Molmil
Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor
分子名称: 3-[(2,4-DICHLOROBENZOYL)(ISOPROPYL)AMINO]-5-PHENYLTHIOPHENE-2-CARBOXYLIC ACID, RNA dependent RNA polymerase, SULFATE ION
著者Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G.
登録日2005-02-16
公開日2005-03-22
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors.
J.Biol.Chem., 280, 2005
1Z25
DownloadVisualize
BU of 1z25 by Molmil
Structure of P.furiosus Argonaute with bound Mn2+
分子名称: Argonaute, MANGANESE (II) ION
著者Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
登録日2005-03-07
公開日2005-04-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
8J23
DownloadVisualize
BU of 8j23 by Molmil
Cryo-EM structure of FFAR2 complex in apo state
分子名称: Free fatty acid receptor 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Tai, L, Li, F, Sun, X, Tang, W, Wang, J.
登録日2023-04-14
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Molecular recognition and activation mechanism of short chain fatty acid receptors FFAR2 and FFAR3
To Be Published
1YXA
DownloadVisualize
BU of 1yxa by Molmil
Serpina3n, a murine orthologue of human antichymotrypsin
分子名称: serine (or cysteine) proteinase inhibitor, clade A, member 3N
著者Horvath, A.J, Irving, J.A, Law, R.H, Rossjohn, J, Bottomley, S.P, Quinsey, N.S, Pike, R.N, Coughlin, P.B, Whisstock, J.C.
登録日2005-02-20
公開日2005-09-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The murine orthologue of human antichymotrypsin: a structural paradigm for clade A3 serpins.
J.Biol.Chem., 280, 2005
4QXL
DownloadVisualize
BU of 4qxl by Molmil
Crystal Structure of FLHE
分子名称: Flagellar protein flhE
著者Lee, J, Monzingo, A.F, Keatinge-Clay, A.T, Harshey, R.M.
登録日2014-07-21
公開日2015-01-14
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.512 Å)
主引用文献Structure of Salmonella FlhE, Conserved Member of a Flagellar Type III Secretion Operon.
J.Mol.Biol., 427, 2015
1C5Z
DownloadVisualize
BU of 1c5z by Molmil
STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB-MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR
分子名称: BENZAMIDINE, CITRATE ANION, PROTEIN (UROKINASE-TYPE PLASMINOGEN ACTIVATOR)
著者Katz, B.A, Mackman, R, Luong, C, Radika, K, Martelli, A, Sprengeler, P.A, Wang, J, Chan, H, Wong, L.
登録日1999-12-22
公開日2000-12-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for selectivity of a small molecule, S1-binding, submicromolar inhibitor of urokinase-type plasminogen activator.
Chem.Biol., 7, 2000
4QY8
DownloadVisualize
BU of 4qy8 by Molmil
Crystal Structure of anti-MSP2 Fv fragment (mAb6D8) in complex with 3D7-MSP2 14-30
分子名称: Fv fragment(mAb6D8) heavy chain, Fv fragment(mAb6D8) light chain, Merozoite surface antigen 2
著者Morales, R.A.V, MacRaild, C.A, Seow, J, Bankala, K, Drinkwater, N, McGowan, S, Rouet, R, Christ, D, Anders, R.F, Norton, R.S.
登録日2014-07-24
公開日2015-06-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.353 Å)
主引用文献Structural basis for epitope masking and strain specificity of a conserved epitope in an intrinsically disordered malaria vaccine candidate.
Sci Rep, 5, 2015
7W5G
DownloadVisualize
BU of 7w5g by Molmil
The apo structure of trichobrasilenol synthase TaTC6 with the space group of orthorhombic
分子名称: GLYCEROL, SULFATE ION, Terpene cyclase 6
著者Chen, C, Wang, T, Yang, Y, Zhang, L, Ko, T, Huang, J, Guo, R.
登録日2021-11-30
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the cyclization of unusual brasilane-type sesquiterpenes.
Int.J.Biol.Macromol., 209, 2022
8J3C
DownloadVisualize
BU of 8j3c by Molmil
Crystal structure of AtHPPD-Y19623 complex
分子名称: 4-hydroxyphenylpyruvate dioxygenase, 5-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-phenyl-quinazolin-4-one, COBALT (II) ION
著者Dong, J, Yang, G.-F, Lin, H.-Y.
登録日2023-04-16
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.703 Å)
主引用文献Crystal structure of AtHPPD-Y19623 complex
To Be Published
5ET3
DownloadVisualize
BU of 5et3 by Molmil
Crystal Structure of De novo Designed Fullerene organizing peptide
分子名称: (C_{60}-I_{h})[5,6]fullerene, Fullerene Organizing Protein (C60Sol-COP-3)
著者Kim, K.-H, Kim, Y.H, Acharya, R, Kim, N.H, Paul, J, Grigoryan, G, DeGrado, W.F.
登録日2015-11-17
公開日2016-05-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.671 Å)
主引用文献Protein-directed self-assembly of a fullerene crystal.
Nat Commun, 7, 2016
1YZ9
DownloadVisualize
BU of 1yz9 by Molmil
Crystal structure of RNase III mutant E110Q from Aquifex aeolicus complexed with double stranded RNA at 2.1-Angstrom Resolution
分子名称: 5'-R(*CP*GP*AP*AP*CP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III, SULFATE ION
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-28
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
7W5F
DownloadVisualize
BU of 7w5f by Molmil
The apo structure of trichobrasilenol synthase TaTC6 with the space group of monoclinic
分子名称: MAGNESIUM ION, Terpene cyclase 6
著者Chen, C, Wang, T, Yang, Y, Zhang, L, Ko, T, Huang, J, Guo, R.
登録日2021-11-30
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Structural insights into the cyclization of unusual brasilane-type sesquiterpenes.
Int.J.Biol.Macromol., 209, 2022
1Z16
DownloadVisualize
BU of 1z16 by Molmil
Crystal structure analysis of periplasmic Leu/Ile/Val-binding protein with bound leucine
分子名称: CADMIUM ION, LEUCINE, Leu/Ile/Val-binding protein
著者Trakhanov, S.D, Vyas, N.K, Kristensen, D.M, Ma, J, Quiocho, F.A.
登録日2005-03-03
公開日2005-10-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Ligand-free and -bound structures of the binding protein (LivJ) of the Escherichia coli ABC leucine/isoleucine/valine transport system: trajectory and dynamics of the interdomain rotation and ligand specificity.
Biochemistry, 44, 2005
1ZBK
DownloadVisualize
BU of 1zbk by Molmil
Recognition of specific peptide sequences by signalling protein from sheep mammary gland (SPS-40): Crystal structure of the complex of SPS-40 with a peptide Trp-Pro-Trp at 2.9A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1, PEPTIDE TRP-PRO-TRP
著者Srivastava, D.B, Ethayathulla, A.S, Kumar, J, Singh, N, Somvanshi, R.K, Sharma, S, Dey, S, Singh, T.P.
登録日2005-04-08
公開日2005-05-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Recognition of specific peptide sequences by signalling protein from sheep mammary gland (SPS-40): Crystal structure of the complex of SPS-40 with a peptide Trp-Pro-Trp at 2.9A resolution
To be Published
1Z1R
DownloadVisualize
BU of 1z1r by Molmil
HIV-1 protease complexed with Macrocyclic peptidomimetic inhibitor 2
分子名称: 2-[(8S,11S)-11-{(1R)-1-HYDROXY-2-[ISOPENTYL(PHENYLSULFONYL)AMINO]ETHYL}-6,9-DIOXO-2-OXA-7,10-DIAZABICYCLO[11.2.2]HEPTADECA-1(15),13,16-TRIEN-8-YL]ACETAMIDE, Pol polyprotein, SULFATE ION
著者Martin, J.L, Begun, J, Schindeler, A, Wickramasinghe, W.A, Alewood, D, Alewood, P.F, Bergman, D.A, Brinkworth, R.I, Abbenante, G, March, D.R, Reid, R.C, Fairlie, D.P.
登録日2005-03-06
公開日2005-03-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular recognition of macrocyclic peptidomimetic inhibitors by HIV-1 protease
Biochemistry, 38, 1999
1ZBV
DownloadVisualize
BU of 1zbv by Molmil
Crystal Structure of the goat signalling protein (SPG-40) complexed with a designed peptide Trp-Pro-Trp at 3.2A resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase-3 like protein 1, WPW
著者Kumar, J, Ethayathulla, A.S, Srivastava, D.B, Singh, N, Sharma, S, Somvanshi, R.K, Dey, S, Singh, T.P.
登録日2005-04-09
公開日2005-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Crystal Structure of the goat signalling protein (SPG-40) complexed with a designed peptide Trp-Pro-Trp at 3.2A resolution
to be published
1Z26
DownloadVisualize
BU of 1z26 by Molmil
Structure of Pyrococcus furiosus Argonaute with bound tungstate
分子名称: Argonaute, TUNGSTATE(VI)ION
著者Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
登録日2005-03-07
公開日2005-04-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
1ZF3
DownloadVisualize
BU of 1zf3 by Molmil
ATC Four-stranded DNA Holliday Junction
分子名称: 5'-D(*CP*CP*GP*AP*TP*AP*TP*CP*GP*G)-3', CALCIUM ION
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-19
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5ETB
DownloadVisualize
BU of 5etb by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED13
分子名称: 1-(7-methyl-1~{H}-indol-3-yl)ethanone, NITRATE ION, Peregrin
著者Zhu, J, Caflisch, A.
登録日2015-11-17
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
1ZFH
DownloadVisualize
BU of 1zfh by Molmil
TTA Duplex B-DNA
分子名称: 5'-D(*CP*CP*TP*AP*AP*TP*TP*AP*GP*G)-3'
著者Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
登録日2005-04-20
公開日2005-05-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4R7L
DownloadVisualize
BU of 4r7l by Molmil
Structure of Human Leukotriene A4 Hydrolase in complex with inhibitor H1
分子名称: ACETATE ION, GLYCEROL, IMIDAZOLE, ...
著者Ouyang, P, Cui, K, Lu, W, Huang, J.
登録日2014-08-27
公開日2015-11-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Human Leukotriene A4 Hydrolase in complex with SAHA
To be Published
5ETD
DownloadVisualize
BU of 5etd by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED14
分子名称: 1-(1~{H}-indol-3-yl)ethanone, NITRATE ION, Peregrin
著者Zhu, J, Caflisch, A.
登録日2015-11-17
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
7W5I
DownloadVisualize
BU of 7w5i by Molmil
The structure of trichobrasilenol synthase TaTC6 in complex with FPP-1
分子名称: FARNESYL DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Chen, C, Wang, T, Yang, Y, Zhang, L, Ko, T, Huang, J, Guo, R.
登録日2021-11-30
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural insights into the cyclization of unusual brasilane-type sesquiterpenes.
Int.J.Biol.Macromol., 209, 2022
4R99
DownloadVisualize
BU of 4r99 by Molmil
Crystal structure of a uricase from Bacillus fastidious
分子名称: SULFATE ION, Uricase
著者Feng, J, Wang, L, Liu, H.B, Liu, L, Liao, F.
登録日2014-09-03
公開日2015-05-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Bacillus fastidious uricase reveals an unexpected folding of the C-terminus residues crucial for thermostability under physiological conditions.
Appl.Microbiol.Biotechnol., 99, 2015

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon