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PDB: 42550 件

4PRF
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A Second Look at the HDV Ribozyme Structure and Dynamics.
分子名称: Hepatitis Delta virus ribozyme, STRONTIUM ION, U1 small nuclear ribonucleoprotein A
著者Kapral, G.J, Jain, S, Noeske, J, Doudna, J.A, Richardson, D.C, Richardson, J.S.
登録日2014-03-05
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.395 Å)
主引用文献New tools provide a second look at HDV ribozyme structure, dynamics and cleavage.
Nucleic Acids Res., 42, 2014
5DVH
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BU of 5dvh by Molmil
Structure of the Kunitz-type cysteine protease inhibitor PCPI-3 from potato
分子名称: CHLORIDE ION, PCPI-3
著者Brynda, J, Mishra, M, Mares, M.
登録日2015-09-21
公開日2016-10-12
最終更新日2017-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the Kunitz-type cysteine protease inhibitor PCPI-3 from potato
To Be Published
8HRU
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BU of 8hru by Molmil
Cryo-EM structure of ACE2
分子名称: Angiotensin-converting enzyme 2
著者Xu, J, Liu, N, Wang, H.W.
登録日2022-12-16
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of ACE2
To Be Published
5DWV
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BU of 5dwv by Molmil
Crystal structure of the Luciferase complexed with substrate analogue
分子名称: 2-[6-(cyclobuta-1,3-dien-1-ylamino)-1,3-benzothiazol-2-yl]-1,3-thiazol-4-ol, Luciferin 4-monooxygenase
著者Su, J, Li, Z, Yuan, Z, Gu, L.
登録日2015-09-23
公開日2016-09-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the Luciferase complexed with substrate analogue
To Be Published
8HRI
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BU of 8hri by Molmil
SARS-CoV-2 Delta variant spike protein
分子名称: Spike glycoprotein
著者Xu, J, Cheng, H, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
5DY7
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BU of 5dy7 by Molmil
Crystal structure of the human BRPF1 bromodomain in complex with SEED4
分子名称: 7-(trifluoromethyl)-3,4-dihydroquinoxalin-2(1H)-one, NITRATE ION, Peregrin
著者Zhu, J, Caflisch, A.
登録日2015-09-24
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Twenty Crystal Structures of Bromodomain and PHD Finger Containing Protein 1 (BRPF1)/Ligand Complexes Reveal Conserved Binding Motifs and Rare Interactions.
J.Med.Chem., 59, 2016
8HRM
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BU of 8hrm by Molmil
Cryo-EM structure of streptavidin
分子名称: Streptavidin
著者Xu, J, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4PMJ
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BU of 4pmj by Molmil
Crystal structure of a putative oxidoreductase from Sinorhizobium meliloti 1021 in complex with NADP
分子名称: GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative oxidoreductase
著者Gasiorowska, O.A, Shabalin, I.G, Handing, K.B, Szlachta, K, Zimmerman, M.D, Hillerich, B.S, Gizzi, A, Toro, R, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-05-21
公開日2014-06-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a putative oxidoreductase from Sinorhizobiummeliloti 1021 in complex with NADP
to be published
5E2C
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BU of 5e2c by Molmil
Crystal structure of N-terminal domain of cytoplasmic peptidase PepQ from Mycobacterium tuberculosis H37Rv
分子名称: Xaa-Pro dipeptidase
著者Chang, C, Endres, L, Endres, M, SACCHETTINI, J, JOACHIMIAK, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2015-09-30
公開日2015-10-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of N-terminal domain of cytoplasmic peptidase PepQ from Mycobacterium tuberculosis H37Rv
To Be Published
8HRK
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BU of 8hrk by Molmil
SARS-CoV-2 Delta S-RBD-ACE2 complex
分子名称: Processed angiotensin-converting enzyme 2, Spike protein S1
著者Xu, J, Meng, F, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4PDY
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BU of 4pdy by Molmil
Crystal structure of aminoglycoside phosphotransferase from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
分子名称: Aminoglycoside phosphotransferase, HISTIDINE, THIOCYANATE ION
著者Chang, C, Li, H, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-04-22
公開日2014-05-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structure of aminoglycoside phosphotransferase from Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
To be published
8HPP
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BU of 8hpp by Molmil
Crystal structure of human INTS3 with SAGE1
分子名称: Integrator complex subunit 3, Sarcoma antigen 1
著者Deng, W, Wu, J, Lei, M.
登録日2022-12-12
公開日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Cancer-testis antigen SAGE1 is a pan-cancer master regulator of RNA polymerase II
To Be Published
1WCT
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BU of 1wct by Molmil
A NOVEL CONOTOXIN FROM CONUS TEXTILE WITH UNUSUAL POST-TRANSLATIONAL MODIFICATIONS REDUCES PRESYNAPTIC CALCIUM INFLUX, NMR, 1 STRUCTURE, GLYCOSYLATED PROTEIN
分子名称: OMEGAC-TXIX, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
著者Rigby, A.C, Hambe, B, Czerwiec, E, Baleja, J.D, Furie, B.C, Furie, B, Stenflo, J.
登録日1998-12-18
公開日1999-06-08
最終更新日2020-07-29
実験手法SOLUTION NMR
主引用文献A conotoxin from Conus textile with unusual posttranslational modifications reduces presynaptic Ca2+ influx.
Proc.Natl.Acad.Sci.USA, 96, 1999
8HRN
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BU of 8hrn by Molmil
Cryo-EM structure of ACE2
分子名称: Angiotensin-converting enzyme 2
著者Xu, J, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
5E38
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BU of 5e38 by Molmil
Structural basis of mapping the spontaneous mutations with 5-flourouracil in uracil phosphoribosyltransferase from Mycobacterium tuberculosis
分子名称: Uracil phosphoribosyltransferase
著者Ghode, P, Jobichen, C, Ramachandran, S, Bifani, P, Sivaraman, J.
登録日2015-10-02
公開日2015-10-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of mapping the spontaneous mutations with 5-flurouracil in uracil phosphoribosyltransferase from Mycobacterium tuberculosis
Biochem.Biophys.Res.Commun., 467, 2015
3NHQ
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BU of 3nhq by Molmil
The dark Pfr structure of the photosensory core module of P. aeruginosa Bacteriophytochrome
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome
著者Yang, X, Ren, Z, Kuk, J, Moffat, K.
登録日2010-06-14
公開日2011-11-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome.
Nature, 479, 2011
4PFZ
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BU of 4pfz by Molmil
X-ray Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase from Mycobacterium smegmatis
分子名称: 5-carboxymethyl-2-hydroxymuconate delta-isomerase, SODIUM ION
著者Horanyi, P.S, Abendroth, J, Lorimer, D, Edwards, T, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-05-01
公開日2014-11-19
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray Crystal Structure of 5-carboxymethyl-2-hydroxymuconate delta-isomerase from Mycobacterium smegmatis
To Be Published
8HRL
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BU of 8hrl by Molmil
SARS-CoV-2 Delta S-RBD-ACE2
分子名称: Processed angiotensin-converting enzyme 2, Spike protein S1
著者Xu, J, Meng, F, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
8HRJ
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BU of 8hrj by Molmil
SARS-CoV-2 Delta variant spike protein
分子名称: Spike glycoprotein
著者Xu, J, Cheng, H, Liu, N, Wang, H.W.
登録日2022-12-15
公開日2023-12-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Self-assembled monolayers guided free-standing atomic-crystal/molecule superstructure
To Be Published
4PGB
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BU of 4pgb by Molmil
MHC Class I in complex with modified Sendai virus nucleoprotein peptide FAPGNWPAL
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-B alpha chain, ...
著者Celie, P.H.N, Joosten, R.P, Perrakis, A, Neefjes, J.
登録日2014-05-01
公開日2015-01-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The first step of peptide selection in antigen presentation by MHC class I molecules.
Proc.Natl.Acad.Sci.USA, 112, 2015
5E5A
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BU of 5e5a by Molmil
Crystal structure of the chromatin-tethering domain of Human cytomegalovirus IE1 protein bound to the nucleosome core particle
分子名称: C-terminal domain of Regulatory protein IE1, DNA (146-MER), Histone H2A, ...
著者Fang, Q, Chen, P, Wang, M, Fang, J, Yang, N, Li, G, Xu, R.M.
登録日2015-10-08
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.809 Å)
主引用文献Human cytomegalovirus IE1 protein alters the higher-order chromatin structure by targeting the acidic patch of the nucleosome
Elife, 5, 2016
5E65
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The complex structure of Hemagglutinin-esterase-fusion mutant protein from the influenza D virus with receptor analog 9-O-Ac-3'SLN (Tr322)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-3)-beta-D-galactopyranose, ...
著者Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2015-10-09
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
PLoS Pathog., 12, 2016
1AO4
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COBALT(III)-PEPLOMYCIN COMPLEX DETERMINED BY NMR STUDIES
分子名称: 3-O-carbamoyl-alpha-D-mannopyranose-(1-2)-alpha-L-gulopyranose, AGLYCON OF PEPLOMYCIN, COBALT (III) ION, ...
著者Caceres-Cortes, J, Sugiyama, H, Ikudome, K, Saito, I, Wang, A.H.-J.
登録日1997-07-16
公開日1999-07-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structures of cobalt(III)-pepleomycin and cobalt(III)-deglycopepleomycin (green forms) determined by NMR studies.
Eur.J.Biochem., 244, 1997
5E79
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Macromolecular diffractive imaging using imperfect crystals
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Ayyer, K, Yefanov, O, Oberthur, D, Roy-Chowdhury, S, Galli, L, Mariani, V, Basu, S, Coe, J, Conrad, C.E, Fromme, R, Schaffer, A, Dorner, K, James, D, Kupitz, C, Metz, M, Nelson, G, Xavier, P.L, Beyerlein, K.R, Schmidt, M, Sarrou, I, Spence, J.C.H, Weierstall, U, White, T.A, Yang, J.-H, Zhao, Y, Liang, M, Aquila, A, Hunter, M.S, Koglin, J.E, Boutet, S, Fromme, P, Barty, A, Chapman, H.N.
登録日2015-10-12
公開日2017-02-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Macromolecular diffractive imaging using imperfect crystals.
Nature, 530, 2016
5E86
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isolated SBD of BiP with loop34 modification
分子名称: 78 kDa glucose-regulated protein
著者Liu, Q, Yang, J, Nune, M, Zong, Y, Zhou, L.
登録日2015-10-13
公開日2015-12-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.681 Å)
主引用文献Close and Allosteric Opening of the Polypeptide-Binding Site in a Human Hsp70 Chaperone BiP.
Structure, 23, 2015

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