Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42550 件

1DR7
DownloadVisualize
BU of 1dr7 by Molmil
CRYSTAL STRUCTURES OF ORGANOMERCURIAL-ACTIVATED CHICKEN LIVER DIHYDROFOLATE REDUCTASE COMPLEXES
分子名称: CALCIUM ION, DIHYDROFOLATE REDUCTASE, MERCURIBENZOIC ACID, ...
著者Mctigue, M.A, Davies /II, J.F, Kaufman, B.T, Xuong, N.-H, Kraut, J.
登録日1992-03-14
公開日1993-10-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of Organomercurial-Activated Chicken Liver Dihydrofolate Reductase Complexes
To be Published
1KZ7
DownloadVisualize
BU of 1kz7 by Molmil
Crystal Structure of the DH/PH Fragment of Murine Dbs in Complex with the Placental Isoform of Human Cdc42
分子名称: CDC42 HOMOLOG, GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS
著者Rossman, K.L, Worthylake, D.K, Snyder, J.T, Siderovski, D.P, Campbell, S.L, Sondek, J.
登録日2002-02-06
公開日2002-03-20
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A crystallographic view of interactions between Dbs and Cdc42: PH domain-assisted guanine nucleotide exchange.
EMBO J., 21, 2002
1Q04
DownloadVisualize
BU of 1q04 by Molmil
Crystal structure of FGF-1, S50E/V51N
分子名称: FORMIC ACID, Heparin-binding growth factor 1
著者Kim, J, Blaber, M.
登録日2003-07-15
公開日2004-07-27
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005
5V9P
DownloadVisualize
BU of 5v9p by Molmil
Crystal structure of pyrrolidine amide inhibitor [(3S)-3-(4-bromo-1H-pyrazol-1-yl)pyrrolidin-1-yl][3-(propan-2-yl)-1H-pyrazol-5-yl]methanone (compound 35) in complex with KDM5A
分子名称: Lysine-specific demethylase 5A, NICKEL (II) ION, SULFATE ION, ...
著者Kiefer, J.R, Liang, J, Vinogradova, M.
登録日2017-03-23
公開日2017-05-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献From a novel HTS hit to potent, selective, and orally bioavailable KDM5 inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
6O1P
DownloadVisualize
BU of 6o1p by Molmil
Cryo-EM structure of full length TRPV5 in nanodisc
分子名称: Transient receptor potential cation channel subfamily V member 5
著者Dang, S, van Goor, M.K, Asarnow, D, Wang, Y, Julius, D, Cheng, Y, van der Wijst, J.
登録日2019-02-21
公開日2019-04-24
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insight into TRPV5 channel function and modulation.
Proc.Natl.Acad.Sci.USA, 116, 2019
6O3C
DownloadVisualize
BU of 6o3c by Molmil
Crystal structure of active Smoothened bound to SAG21k, cholesterol, and NbSmo8
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-chloro-4,7-difluoro-N-{[2-methoxy-5-(pyridin-4-yl)phenyl]methyl}-N-[trans-4-(methylamino)cyclohexyl]-1-benzothiophene-2-carboxamide, ...
著者Deshpande, I.S, Liang, J, Hedeen, D, Roberts, K.J, Zhang, Y, Ha, B, Latorraca, N.R, Faust, B, Dror, R.O, Beachy, P.A, Myers, B.R, Manglik, A.
登録日2019-02-26
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Smoothened stimulation by membrane sterols drives Hedgehog pathway activity.
Nature, 571, 2019
5V52
DownloadVisualize
BU of 5v52 by Molmil
Structure of TIGIT bound to nectin-2 (CD112)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Nectin-2, ...
著者Deuss, F.A, Gully, B.S, Rossjohn, J, Berry, R.
登録日2017-03-13
公開日2017-05-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Recognition of nectin-2 by the natural killer cell receptor T cell immunoglobulin and ITIM domain (TIGIT).
J. Biol. Chem., 292, 2017
5VBN
DownloadVisualize
BU of 5vbn by Molmil
Crystal Structure of human DNA polymerase epsilon B-subunit in complex with C-terminal domain of catalytic subunit
分子名称: DNA polymerase epsilon catalytic subunit A, DNA polymerase epsilon subunit 2, SULFATE ION, ...
著者Baranovskiy, A.G, Gu, J, Suwa, Y, Babayeva, N.D, Tahirov, T.H.
登録日2017-03-29
公開日2017-08-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of the human Pol B-subunit in complex with the C-terminal domain of the catalytic subunit.
J. Biol. Chem., 292, 2017
6NBN
DownloadVisualize
BU of 6nbn by Molmil
Structure of Aedes aegypti OBP22 in the complex with arachidonic acid
分子名称: AAEL005772-PA, ARACHIDONIC ACID
著者Jones, D.N, Wang, J.
登録日2018-12-07
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Aedes aegypti Odorant Binding Protein 22 selectively binds fatty acids through a conformational change in its C-terminal tail.
Sci Rep, 10, 2020
2AXE
DownloadVisualize
BU of 2axe by Molmil
IODINATED COMPLEX OF ACETYL XYLAN ESTERASE AT 1.80 ANGSTROMS
分子名称: ACETYL XYLAN ESTERASE, SULFATE ION
著者Ghosh, D, Erman, M, Sawicki, M.W, Lala, P, Weeks, D.R, Li, N, Pangborn, W, Thiel, D.J, Jornvall, H, Eyzaguirre, J.
登録日1998-09-01
公開日1999-05-18
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Determination of a protein structure by iodination: the structure of iodinated acetylxylan esterase.
Acta Crystallogr.,Sect.D, 55, 1999
4G9D
DownloadVisualize
BU of 4g9d by Molmil
Crystal Structure of HLA B2705-KK10
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Gras, S, Wilmann, P.G, Rossjohn, J.
登録日2012-07-23
公開日2013-03-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Molecular Basis for the Control of Preimmune Escape Variants by HIV-Specific CD8(+) T Cells.
Immunity, 38, 2013
2AKO
DownloadVisualize
BU of 2ako by Molmil
Crystal structure of Glutamate 5-kinase from Campylobacter jejuni
分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutamate 5-kinase
著者Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2005-08-03
公開日2005-08-09
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Glutamate 5-kinase from Campylobacter jejuni
To be Published
3BAQ
DownloadVisualize
BU of 3baq by Molmil
Crystal structure of L26A mutant of Human acidic fibroblast growth factor
分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
著者Lee, J, Blaber, M.
登録日2007-11-08
公開日2008-04-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A logical OR redundancy within the Asx-Pro-Asx-Gly type I beta-turn motif.
J.Mol.Biol., 377, 2008
2ALB
DownloadVisualize
BU of 2alb by Molmil
NMR structure of the N-terminal domain a of the glycoprotein chaperone ERp57
分子名称: Protein disulfide-isomerase A3
著者Silvennoinen, L, Tossavainen, H, Myllyharju, J, Permi, P.
登録日2005-08-05
公開日2006-08-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of the N-terminal domain a of the glycoprotein chaperone ERp57
To be Published
4GAI
DownloadVisualize
BU of 4gai by Molmil
Crystal structure of EBI-005, a chimera of human IL-1beta and IL-1Ra
分子名称: EBI-005
著者Hou, J, Townson, S.A, Kovalchin, J.T, Masci, A, Kiner, O, Shu, Y, King, B, Thomas, C, Garcia, K.C, Furfine, E.S, Barnes, T.M.
登録日2012-07-25
公開日2013-02-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Design of a superior cytokine antagonist for topical ophthalmic use.
Proc.Natl.Acad.Sci.USA, 110, 2013
3BB7
DownloadVisualize
BU of 3bb7 by Molmil
Structure of Prevotella intermedia prointerpain A fragment 39-359 (mutant C154A)
分子名称: interpain A
著者Mallorqui-Fernandez, N, Manandhar, S.P, Mallorqui-Fernandez, G, Uson, I, Wawrzonek, K, Kantyka, T, Sola, M, Thogersen, I.B, Enghild, J.J, Potempa, J, Gomis-Ruth, F.X.
登録日2007-11-09
公開日2007-11-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A New Autocatalytic Activation Mechanism for Cysteine Proteases Revealed by Prevotella intermedia Interpain A
J.Biol.Chem., 283, 2008
2AIA
DownloadVisualize
BU of 2aia by Molmil
S.pneumoniae PDF complexed with SB-543668
分子名称: 2-(3-BENZOYLPHENOXY)ETHYL(HYDROXY)FORMAMIDE, NICKEL (II) ION, Peptide deformylase, ...
著者Smith, K.J, Petit, C.M, Aubart, K, Smyth, M, McManus, E, Jones, J, Fosberry, A, Lewis, C, Lonetto, M, Christensen, S.B.
登録日2005-07-29
公開日2005-09-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Variation and inhibitor binding in polypeptide deformylase from four different bacterial species.
Protein Sci., 12, 2003
2AIN
DownloadVisualize
BU of 2ain by Molmil
Solution structure of the AF-6 PDZ domain complexed with the C-terminal peptide from the Bcr protein
分子名称: 6-mer peptide from Breakpoint cluster region protein, Afadin
著者Chen, Q, Wu, J, Shi, Y.
登録日2005-07-30
公開日2006-07-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of the AF-6 PDZ domain/Bcr peptide complex.
Protein Sci., 16, 2007
6O6O
DownloadVisualize
BU of 6o6o by Molmil
Structure of the regulator FasR from Mycobacterium tuberculosis
分子名称: MYRISTIC ACID, TetR family transcriptional regulator
著者Larrieux, N, Trajtenberg, F, Lara, J, Gramajo, H, Buschiazzo, A.
登録日2019-03-07
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Mycobacterium tuberculosis FasR senses long fatty acyl-CoA through a tunnel and a hydrophobic transmission spine.
Nat Commun, 11, 2020
3BBD
DownloadVisualize
BU of 3bbd by Molmil
M. jannaschii Nep1 complexed with S-adenosyl-homocysteine
分子名称: GLYCEROL, Ribosome biogenesis protein NEP1-like, S-ADENOSYL-L-HOMOCYSTEINE
著者Taylor, A.B, Meyer, B, Leal, B.Z, Kotter, P, Hart, P.J, Entian, K.-D, Wohnert, J.
登録日2007-11-09
公開日2008-02-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The crystal structure of Nep1 reveals an extended SPOUT-class methyltransferase fold and a pre-organized SAM-binding site.
Nucleic Acids Res., 36, 2008
2AP6
DownloadVisualize
BU of 2ap6 by Molmil
X-Ray Crystal Structure of Protein Atu4242 from Agrobacterium tumefaciens. Northeast Strucutral Genomics Consortium Target AtR43.
分子名称: hypothetical protein Atu4242
著者Benach, J, Kuzin, A.P, Forouhar, F, Abashidze, M, Vorobiev, S.M, Rong, X, Acton, T.B, Montelione, G.T, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2005-08-15
公開日2005-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of a Hypothetical protein Atu4242 from Agrobacterium tumefaciens (strain C58 / ATCC 3 NESG Target ATR43.
To be Published
2AK5
DownloadVisualize
BU of 2ak5 by Molmil
beta PIX-SH3 complexed with a Cbl-b peptide
分子名称: 8-residue peptide from a signal transduction protein CBL-B, Rho guanine nucleotide exchange factor 7
著者Jozic, D, Cardenes, N, Deribe, Y.L, Moncalian, G, Hoeller, D, Groemping, Y, Dikic, I, Rittinger, K, Bravo, J.
登録日2005-08-03
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Cbl promotes clustering of endocytic adaptor proteins.
Nat.Struct.Mol.Biol., 12, 2005
2AKI
DownloadVisualize
BU of 2aki by Molmil
Normal mode-based flexible fitted coordinates of a translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
分子名称: Preprotein translocase secE subunit, Preprotein translocase secY subunit, Protein-export membrane protein secG
著者Mitra, K, Schaffitzel, C, Shaikh, T, Tama, F, Jenni, S, Brooks III, C.L, Ban, N, Frank, J.
登録日2005-08-03
公開日2005-11-15
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (14.9 Å)
主引用文献Structure of the E. coli protein-conducting channel bound to a translating ribosome.
Nature, 438, 2005
5UOV
DownloadVisualize
BU of 5uov by Molmil
HIV-1 wild Type protease with GRL-1118A , an isophthalamide-derived P2-P3 ligand with the sulfonamide isostere as the P2' group
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2017-02-01
公開日2017-05-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Design of novel HIV-1 protease inhibitors incorporating isophthalamide-derived P2-P3 ligands: Synthesis, biological evaluation and X-ray structural studies of inhibitor-HIV-1 protease complex.
Bioorg. Med. Chem., 25, 2017
2AXO
DownloadVisualize
BU of 2axo by Molmil
X-Ray Crystal Structure of Protein AGR_C_4864 from Agrobacterium tumefaciens. Northeast Structural Genomics Consortium Target AtR35.
分子名称: hypothetical protein Atu2684
著者Forouhar, F, Abashidze, M, Benach, J, Xiao, R, Janjua, H, Conover, K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2005-09-05
公開日2005-09-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Hypothetical Protein AGR_C_4864 from Agrobacterium tumefaciens, NESG target AtR35
To be Published

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon