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PDB: 42507 件

4HCN
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Crystal structure of Burkholderia pseudomallei effector protein CHBP in complex with ubiquitin
分子名称: DI(HYDROXYETHYL)ETHER, FORMIC ACID, PHOSPHATE ION, ...
著者Yao, Q, Cui, J, Zhu, Y, Shao, F.
登録日2012-09-30
公開日2012-11-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural mechanism of ubiquitin and NEDD8 deamidation catalyzed by bacterial effectors that induce macrophage-specific apoptosis.
Proc.Natl.Acad.Sci.USA, 109, 2012
6MR0
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Crystal Structure of the All-trans Retinal Bound R111K:Y134F:T54V:R132Q:P39Q:R59Y:L121E Human Cellular Retinoic Acid Binding Protein II Mutant After 5 Minutes UV irradiation at 2.6 Angstrom Resolution
分子名称: Cellular retinoic acid-binding protein 2, RETINAL
著者Ghanbarpour, A, Geiger, J.
登録日2018-10-11
公開日2019-01-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.649 Å)
主引用文献Mimicking Microbial Rhodopsin Isomerization in a Single Crystal.
J. Am. Chem. Soc., 141, 2019
6GZF
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Xi Class GST from Natrialba magadii
分子名称: Glutathione S-transferase, SULFATE ION
著者Di Matteo, A, Federici, L, Masulli, M, Carletti, E, Cassidy, J, Paradisi, F, Di Ilio, C, Allocati, N.
登録日2018-07-04
公開日2019-02-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.614 Å)
主引用文献Structural Characterization of the Xi Class Glutathione Transferase From the Haloalkaliphilic ArchaeonNatrialba magadii.
Front Microbiol, 10, 2019
6GZK
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Solution NMR structure of the tetramethylrhodamine (TMR) aptamer 3 in complex with 5-TAMRA
分子名称: 5-carboxy methylrhodamine, TMR3 (48-MER)
著者Duchardt-Ferner, E, Ohlenschlager, O, Kreutz, C.R, Wohnert, J.
登録日2018-07-04
公開日2019-07-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of an RNA aptamer in complex with the fluorophore tetramethylrhodamine.
Nucleic Acids Res., 48, 2020
1YRA
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PAB0955 crystal structure : a GTPase in GDP bound form from Pyrococcus abyssi
分子名称: ATP(GTP)binding protein, GUANOSINE-5'-DIPHOSPHATE
著者Gras, S, Carpentier, P, Armengaud, J, Housset, D.
登録日2005-02-03
公開日2006-02-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into a new homodimeric self-activated GTPase family.
Embo Rep., 8, 2007
4ILZ
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Structural and kinetic study of an internal substrate binding site of dehaloperoxidase-hemoglobin A from Amphitrite ornata
分子名称: 2,4,6-TRIBROMOPHENOL, Dehaloperoxidase A, ISOPROPYL ALCOHOL, ...
著者de Serrano, V.S, Zhao, J, Zhao, J, Franzen, S.
登録日2013-01-01
公開日2013-03-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural and Kinetic Study of an Internal Substrate Binding Site in Dehaloperoxidase-Hemoglobin A from Amphitrite ornata.
Biochemistry, 52, 2013
1AYB
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CRYSTAL STRUCTURES OF PEPTIDE COMPLEXES OF THE AMINO-TERMINAL SH2 DOMAIN OF THE SYP TYROSINE PHOSPHATASE
分子名称: PEPTIDE IRS-1-895, PROTEIN-TYROSINE PHOSPHATASE SYP (N-TERMINAL SH2 DOMAIN)
著者Lee, C.-H, Kuriyan, J.
登録日1994-05-15
公開日1994-08-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of peptide complexes of the amino-terminal SH2 domain of the Syp tyrosine phosphatase.
Structure, 2, 1994
8ECE
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BU of 8ece by Molmil
E. coli L-asparaginase II mutant (V27T) in complex with L-Glu
分子名称: 1,2-ETHANEDIOL, GLUTAMIC ACID, L-asparaginase 2
著者Strzelczyk, P, Wlodawer, A, Lubkowski, J.
登録日2022-09-01
公開日2022-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The E. coli L-asparaginase V27T mutant: structural and functional characterization and comparison with theoretical predictions.
Febs Lett., 596, 2022
1KOA
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BU of 1koa by Molmil
TWITCHIN KINASE FRAGMENT (C.ELEGANS), AUTOREGULATED PROTEIN KINASE AND IMMUNOGLOBULIN DOMAINS
分子名称: TWITCHIN
著者Kobe, B, Heierhorst, J, Feil, S.C, Parker, M.W, Benian, G.M, Weiss, K.R, Kemp, B.E.
登録日1996-06-28
公開日1997-03-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Giant protein kinases: domain interactions and structural basis of autoregulation.
EMBO J., 15, 1996
8ECD
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BU of 8ecd by Molmil
E. coli L-asparaginase II mutant (V27T) in complex with L-Asp
分子名称: 1,2-ETHANEDIOL, ASPARTIC ACID, CITRIC ACID, ...
著者Strzelczyk, P, Wlodawer, A, Lubkowski, J.
登録日2022-09-01
公開日2022-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献The E. coli L-asparaginase V27T mutant: structural and functional characterization and comparison with theoretical predictions.
Febs Lett., 596, 2022
4MHX
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BU of 4mhx by Molmil
Crystal Structure of Sulfamidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Sidhu, N.S, Uson, I, Schreiber, K, Proepper, K, Becker, S, Gaertner, J, Kraetzner, R, Steinfeld, R, Sheldrick, G.M.
登録日2013-08-30
公開日2014-05-14
最終更新日2021-06-02
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of sulfamidase provides insight into the molecular pathology of mucopolysaccharidosis IIIA.
Acta Crystallogr.,Sect.D, 70, 2014
1KLO
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BU of 1klo by Molmil
CRYSTAL STRUCTURE OF THREE CONSECUTIVE LAMININ-TYPE EPIDERMAL GROWTH FACTOR-LIKE (LE) MODULES OF LAMININ GAMMA1 CHAIN HARBORING THE NIDOGEN BINDING SITE
分子名称: LAMININ
著者Stetefeld, J, Mayer, U, Timpl, R, Huber, R.
登録日1996-02-02
公開日1997-08-20
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of three consecutive laminin-type epidermal growth factor-like (LE) modules of laminin gamma1 chain harboring the nidogen binding site.
J.Mol.Biol., 257, 1996
8DOF
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BU of 8dof by Molmil
Pseudomonas aeruginosa MurC with WYH9-2-P - OSA_001044
分子名称: (2R)-2-cyclohexyl-2-[(4-{[5-(propan-2-yl)-1H-pyrazol-3-yl]amino}-1H-pyrazolo[3,4-d]pyrimidin-6-yl)amino]ethan-1-ol, 1,2-ETHANEDIOL, SULFATE ION, ...
著者Horanyi, P.S, Wang, Y, Todd, M.H, Abendroth, J, Edwards, T, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-07-13
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Pseudomonas aeruginosa MurC with WYH9-2-P - OSA_001044
To Be Published
1L3A
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Structure of the plant transcriptional regulator PBF-2
分子名称: p24: plant transcriptional regulator PBF-2
著者Desveaux, D, Allard, J, Brisson, N, Sygusch, J.
登録日2002-02-26
公開日2002-06-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A new family of plant transcription factors displays a novel ssDNA-binding surface.
Nat.Struct.Biol., 9, 2002
8DQK
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Intermediate resolution structure of barley (1,3;1,4)-beta-glucan synthase CslF6.
分子名称: Cellulose synthase-like CslF6
著者Ho, R, Purushotham, P, Zimmer, J.
登録日2022-07-19
公開日2022-11-30
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Mechanism of mixed-linkage glucan biosynthesis by barley cellulose synthase-like CslF6 (1,3;1,4)-beta-glucan synthase.
Sci Adv, 8, 2022
4IDV
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BU of 4idv by Molmil
Crystal Structure of NIK with compound 4-{3-[2-amino-5-(2-methoxyethoxy)pyrimidin-4-yl]-1H-indol-5-yl}-2-methylbut-3-yn-2-ol (13V)
分子名称: 4-{3-[2-amino-5-(2-methoxyethoxy)pyrimidin-4-yl]-1H-indol-5-yl}-2-methylbut-3-yn-2-ol, Mitogen-activated protein kinase kinase kinase 14
著者Liu, J, Sudom, A, Wang, Z.
登録日2012-12-13
公開日2013-04-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Inhibiting NF-KB-inducing kinase (NIK): Discovery, structure-based design, synthesis, structure activity relationship, and co-crystal structures
Bioorg.Med.Chem.Lett., 23, 2013
8DMO
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BU of 8dmo by Molmil
Structure of open, inward-facing MsbA from E. coli
分子名称: ATP-binding transport protein MsbA
著者Liu, C, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2022-07-08
公開日2022-12-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for lipid and copper regulation of the ABC transporter MsbA.
Nat Commun, 13, 2022
8DMM
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Structure of the vanadate-trapped MsbA bound to KDL
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ADP ORTHOVANADATE, ATP-binding transport protein MsbA
著者Liu, C, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2022-07-08
公開日2022-12-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural basis for lipid and copper regulation of the ABC transporter MsbA.
Nat Commun, 13, 2022
8DL7
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Cryo-EM structure of human ferroportin/slc40 bound to minihepcidin PR73 in nanodisc
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 11F9 heavy-chain, 11F9 light-chain, ...
著者Shen, J, Wilbon, A.S, Pan, Y, Zhou, M.
登録日2022-07-07
公開日2022-12-07
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis of ferroportin inhibition by minihepcidin PR73.
Plos Biol., 21, 2023
8DL8
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Cryo-EM structure of human ferroportin/slc40 bound to Co2+ in nanodisc
分子名称: 11F9 heavy-chain, 11F9 light-chain, COBALT (II) ION, ...
著者Shen, J, Wilbon, A.S, Pan, Y, Zhou, M.
登録日2022-07-07
公開日2022-12-07
最終更新日2023-02-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of ferroportin inhibition by minihepcidin PR73.
Plos Biol., 21, 2023
8DW2
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BU of 8dw2 by Molmil
Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR22, and two antibody Fabs, S309 and CR3022
分子名称: Antibody CR3022 heavy chain, Antibody CR3022 light chain, Antibody S309 heavy chain, ...
著者Kwon, Y.D, Gorman, J, Kwong, P.D.
登録日2022-07-30
公開日2022-12-07
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (4.11 Å)
主引用文献A potent and broad neutralization of SARS-CoV-2 variants of concern by DARPins.
Nat.Chem.Biol., 19, 2023
8DW3
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Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR16m, and two antibody Fabs, S309 and CR3022
分子名称: Anti-SARS-CoV-2 DARPin SR16m, Antibody S309 light chain, Spike protein S1, ...
著者Kwon, Y.D, Gorman, J, Kwong, P.D.
登録日2022-07-30
公開日2022-12-07
最終更新日2023-03-15
実験手法ELECTRON MICROSCOPY (4.26 Å)
主引用文献A potent and broad neutralization of SARS-CoV-2 variants of concern by DARPins.
Nat.Chem.Biol., 19, 2023
3ZF0
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BU of 3zf0 by Molmil
Phage dUTPases control transfer of virulence genes by a proto-oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81A mutant with dUpNHpp).
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DUTPASE, NICKEL (II) ION
著者Tormo-Mas, M.A, Donderis, J, Garcia-Caballer, M, Alt, A, Mir-Sanchis, I, Marina, A, Penades, J.R.
登録日2012-12-10
公開日2013-01-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
Mol.Cell, 49, 2013
8E6Y
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NMR structure of Sa1_V90T at 30 degrees Celsius
分子名称: Sa1_V90T_30C
著者Solomon, T.S, Orban, J.
登録日2022-08-23
公開日2023-01-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Reversible switching between two common protein folds in a designed system using only temperature.
Proc.Natl.Acad.Sci.USA, 120, 2023
5EIG
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Engineered human cystathionine gamma lyase (E59T, E339V) to deplet cysteine
分子名称: CYSTEINE, Cystathionine gamma-lyase, SULFATE ION
著者Yan, W, Zhang, J.
登録日2015-10-29
公開日2016-11-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Systemic Depletion of Serum L-Cyst(e)ine with an Engineered Human Enzyme Mediates Potent Induction of ROS and Cancer Ablation
To Be Published

223790

件を2024-08-14に公開中

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