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PDB: 42289 件

8ED0
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Cryo-EM Structure of the P74-26 Tail Tube
分子名称: Tail Tube Protein gp93
著者Agnello, E, Pajak, J, Liu, X, Kelch, B.
登録日2022-09-02
公開日2023-03-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.72 Å)
主引用文献Conformational dynamics control assembly of an extremely long bacteriophage tail tube.
J.Biol.Chem., 299, 2023
4YLW
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Crystal structure of human dihydroorotate dehydrogenase (DHODH) with No.33 compound
分子名称: Dihydroorotate dehydrogenase (quinone), mitochondrial, FLAVIN MONONUCLEOTIDE, ...
著者Wu, D, Ouyang, P, Lu, W, Huang, J.
登録日2015-03-06
公開日2016-03-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structure of human dihydroorotate dehydrogenase (DHODH) with No.33 compound
To Be Published
8EDX
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Cryo-EM Structure of P74-26 tail-like tubes
分子名称: Tail Tube Protein gp93
著者Agnello, E, Pajak, J, Liu, X, Kelch, B.
登録日2022-09-06
公開日2023-03-08
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Conformational dynamics control assembly of an extremely long bacteriophage tail tube.
J.Biol.Chem., 299, 2023
4YM6
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Crystal structure of the human nucleosome containing 6-4PP (outside)
分子名称: 145-MER DNA, Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Osakabe, A, Tachiwana, H, Kagawa, W, Horikoshi, N, Matsumoto, S, Hasegawa, M, Matsumoto, N, Toga, T, Yamamoto, J, Hanaoka, F, Thoma, N.H, Sugasawa, K, Iwai, S, Kurumizaka, H.
登録日2015-03-06
公開日2015-12-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.514 Å)
主引用文献Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome
Sci Rep, 5, 2015
4J84
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Crystal structure of beta'-COP/Scyl1 complex
分子名称: Coatomer subunit beta', SCYL1
著者Ma, W, Goldberg, J.
登録日2013-02-14
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.473 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
4J8G
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Crystal structure of alpha-COP/E19 complex
分子名称: coatomer subunit alpha, membrane glycoprotein E3 gp19K
著者Ma, W, Goldberg, J.
登録日2013-02-14
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
8E3N
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Crystal structure of pregnane X receptor ligand binding domain complexed with rifamycin S
分子名称: Nuclear receptor subfamily 1 group I member 2, Rifamycin S
著者Huber, A.D, Poudel, S, Seetharaman, J, Miller, D.J, Lin, W, Chen, T.
登録日2022-08-17
公開日2023-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-guided approach to modulate small molecule binding to a promiscuous ligand-activated protein.
Proc.Natl.Acad.Sci.USA, 120, 2023
4YO2
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Structure of E2F8, an atypical member of E2F family of transcription factors
分子名称: DNA (5'-D(P*TP*TP*TP*TP*CP*CP*CP*GP*CP*CP*AP*AP*AP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*GP*GP*CP*GP*GP*GP*AP*AP*AP*A)-3'), Transcription factor E2F8
著者Morgunova, E, Yin, Y, Jolma, A, Dave, K, Schmierer, B, Popov, A, Eremina, N, Nilsson, L, Taipale, J.
登録日2015-03-11
公開日2015-12-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.073 Å)
主引用文献Structural insights into the DNA-binding specificity of E2F family transcription factors.
Nat Commun, 6, 2015
8DVN
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Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.10
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N.
登録日2022-07-29
公開日2023-03-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering.
Acs Chem.Biol., 18, 2023
4J79
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Crystal structure of beta'-COP/PEDVspike complex
分子名称: Coatomer subunit beta', Spike glycoprotein
著者Ma, W, Goldberg, J.
登録日2013-02-12
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.559 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
8DVL
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Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.18
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N.
登録日2022-07-29
公開日2023-03-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering.
Acs Chem.Biol., 18, 2023
8E7Y
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RsTSPO A138F with two heme bound
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, PROTOPORPHYRIN IX CONTAINING FE, Tryptophan-rich sensory protein
著者Liu, J, Hiser, C, Li, F, Garavito, R, Ferguson-Miller, S.
登録日2022-08-25
公開日2023-03-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献New TSPO Crystal Structures of Mutant and Heme-Bound Forms with Altered Flexibility, Ligand Binding, and Porphyrin Degradation Activity.
Biochemistry, 62, 2023
8DVM
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Crystal structure of LRP6 E3E4 in complex with disulfide constrained peptide E3.6
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Thakur, A.K, Liau, N.P.D, Sudhamsu, J, Hannoush, R.N.
登録日2022-07-29
公開日2023-03-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Synthetic Multivalent Disulfide-Constrained Peptide Agonists Potentiate Wnt1/ beta-Catenin Signaling via LRP6 Coreceptor Clustering.
Acs Chem.Biol., 18, 2023
4J5G
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Crystal structure analysis of Streptomyces aureofaciens ribonuclease Sa T95A mutant
分子名称: CACODYLATE ION, GLYCEROL, Guanyl-specific ribonuclease Sa, ...
著者Urbanikova, L, Sevcik, J.
登録日2013-02-08
公開日2014-05-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Contribution of hydrogen bonds to protein stability.
Protein Sci., 23, 2014
4J78
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Crystal structure of beta'-COP/Emp47p complex
分子名称: Coatomer subunit beta', Emp47p
著者Ma, W, Goldberg, J.
登録日2013-02-12
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.478 Å)
主引用文献Rules for the recognition of dilysine retrieval motifs by coatomer.
Embo J., 32, 2013
4YUM
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Multiconformer synchrotron model of CypA at 300 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
8EBU
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XPC release from Core7-XPA-DNA (Cy5)
分子名称: DNA repair protein complementing XP-A cells, DNA repair protein complementing XP-C cells, DNA1, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8E7W
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RsTSPO A139T with Heme
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Liu, J, Hiser, C, Li, F, Garavito, R, Ferguson-Miller, S.
登録日2022-08-25
公開日2023-03-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献New TSPO Crystal Structures of Mutant and Heme-Bound Forms with Altered Flexibility, Ligand Binding, and Porphyrin Degradation Activity.
Biochemistry, 62, 2023
4JKQ
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Crystal structure of the N-terminal region of the human ryanodine receptor 2
分子名称: Ryanodine receptor 2
著者Bauerova, V, Sevcik, J.
登録日2013-03-11
公開日2014-04-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structural insights into the human RyR2 N-terminal region involved in cardiac arrhythmias.
Acta Crystallogr.,Sect.D, 70, 2014
8E84
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Human PCNA mutant- C148S
分子名称: Proliferating cell nuclear antigen
著者Magrino, J, Page, B, Gaubitz, C, Kelch, B.A.
登録日2022-08-25
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献A thermosensitive PCNA allele underlies an ataxia-telangiectasia-like disorder.
J.Biol.Chem., 299, 2023
4YCO
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E. coli dihydrouridine synthase C (DusC) in complex with tRNAPhe
分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Byrne, R.T, Jenkins, H.T, Peters, D.T, Whelan, F, Stowell, J, Aziz, N, Kasatsky, P, Rodnina, M.V, Koonin, E.V, Konevega, A.L, Antson, A.A.
登録日2015-02-20
公開日2015-04-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
8EBS
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Initial DNA-lesion (Cy5) binding by XPC and TFIIH
分子名称: CALCIUM ION, Centrin-2, DNA, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBT
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XPA repositioning Core7 of TFIIH relative to XPC-DNA lesion (Cy5)
分子名称: CALCIUM ION, Centrin-2, DNA, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8EBY
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XPC release from Core7-XPA-DNA (AP)
分子名称: DNA, DNA repair protein complementing XP-A cells, DNA repair protein complementing XP-C cells, ...
著者Kim, J, Yang, W.
登録日2022-08-31
公開日2023-04-19
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Nature, 617, 2023
8DV3
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Crystal structure of human CD1b presenting Phosphatidylinositol C34:1
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Farquhar, R, Rossjohn, J, Shahine, A.
登録日2022-07-28
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献alpha beta T-cell receptor recognition of self-phosphatidylinositol presented by CD1b.
J.Biol.Chem., 299, 2023

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件を2024-07-17に公開中

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