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PDB: 42880 件

7ZKG
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C-Methyltransferase PsmD from Streptomyces griseofuscus with bound cofactor (crystal form 2)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Methyltransferase, PHOSPHATE ION, ...
著者Weiergraeber, O.H, Amariei, D.A, Pozhydaieva, N, Pietruszka, J.
登録日2022-04-13
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications
Acs Catalysis, 2022
2UZ5
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Solution structure of the fkbp-domain of Legionella pneumophila Mip
分子名称: MACROPHAGE INFECTIVITY POTENTIATOR
著者Ceymann, A, Horstmann, M, Ehses, P, Schweimer, K, Steinert, M, Kamphausen, T, Fischer, G, Hacker, J, Rosch, P, Faber, C.
登録日2007-04-25
公開日2007-06-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Domain Motions of the Mip Protein from Legionella Pneumophila
Biochemistry, 45, 2006
2J5X
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STRUCTURE OF THE SMALL G PROTEIN ARF6 IN COMPLEX WITH GTPGAMMAS
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, ADP-RIBOSYLATION FACTOR 6, MAGNESIUM ION
著者Pasqualato, S, Menetrey, J, Franco, M, Cherfils, J.
登録日2006-09-20
公開日2006-09-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Structural Gdp-GTP Cycle of Human Arf6.
Embo Rep., 2, 2001
7ZGT
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C-Methyltransferase PsmD from Streptomyces griseofuscus (apo form)
分子名称: FORMIC ACID, Methyltransferase, PHOSPHATE ION, ...
著者Weiergraeber, O.H, Amariei, D.A, Pozhydaieva, N, Pietruszka, J.
登録日2022-04-04
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications
Acs Catalysis, 2022
7ZR3
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STRUCTURE OF ESTER-HYDROLASE EH0 FROM THE METAGENOME OF SORGHUM BICOLOR RHIZOSPHERE FROM THE HENFAES RESEARCH CENTRE (GWYNEDD, WALES)
分子名称: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Cea-Rama, I, Sanz-Aparicio, J.
登録日2022-05-03
公開日2022-12-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献The Mobility of the Cap Domain Is Essential for the Substrate Promiscuity of a Family IV Esterase from Sorghum Rhizosphere Microbiome.
Appl.Environ.Microbiol., 89, 2023
1JG6
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T4 phage BGT in complex with UDP
分子名称: DNA BETA-GLUCOSYLTRANSFERASE, URIDINE-5'-DIPHOSPHATE
著者Morera, S, Lariviere, L, Kurzeck, J, Aschke-Sonnenborn, U, Freemont, P.S, Janin, J, Ruger, W.
登録日2001-06-23
公開日2001-08-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High resolution crystal structures of T4 phage beta-glucosyltransferase: induced fit and effect of substrate and metal binding.
J.Mol.Biol., 311, 2001
7ZIQ
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BK Polyomavirus VP1 in complex with 6'-Sialyllactose glycomacromolecules (aromatic linker)
分子名称: 1,2-ETHANEDIOL, Capsid protein VP1, DI(HYDROXYETHYL)ETHER, ...
著者Freytag, J, Mueller, J.C, Stehle, T.
登録日2022-04-08
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Synthesis of Homo- and Heteromultivalent Fucosylated and Sialylated Oligosaccharide Conjugates via Preactivated N -Methyloxyamine Precision Macromolecules and Their Binding to Polyomavirus Capsid Proteins.
Biomacromolecules, 23, 2022
7ZIR
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Cryo-EM structure of hnRNPDL amyloid fibrils
分子名称: Heterogeneous nuclear ribonucleoprotein D-like
著者Garcia-Pardo, J, Chaves-Sanjuan, A, Bartolome-Nafria, A, Gil-Garcia, M, Visentin, C, Bolognesi, M, Ricagno, S, Ventura, S.
登録日2022-04-08
公開日2022-12-28
最終更新日2023-12-13
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure of hnRNPDL-2 fibrils, a functional amyloid associated with limb-girdle muscular dystrophy D3.
Nat Commun, 14, 2023
2D05
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Chitosanase From Bacillus circulans mutant K218P
分子名称: Chitosanase, SULFATE ION
著者Fukamizo, T, Amano, S, Yamaguchi, K, Yoshikawa, T, Katsumi, T, Saito, J, Suzuki, M, Miki, K, Nagata, Y, Ando, A.
登録日2005-07-25
公開日2005-12-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bacillus circulans MH-K1 Chitosanase: Amino Acid Residues Responsible for Substrate Binding
J.Biochem.(Tokyo), 138, 2005
7ZR6
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CryoEM structure of HSP90-CDC37-BRAF(V600E)-PP5(open) complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-beta, Hsp90 co-chaperone Cdc37, ...
著者Oberoi, J, Pearl, L.H.
登録日2022-05-03
公開日2022-12-28
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献HSP90-CDC37-PP5 forms a structural platform for kinase dephosphorylation.
Nat Commun, 13, 2022
7ZKH
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C-Methyltransferase PsmD from Streptomyces griseofuscus with bound cofactor (crystal form 1)
分子名称: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, TRIETHYLENE GLYCOL, ...
著者Weiergraeber, O.H, Amariei, D.A, Pozhydaieva, N, Pietruszka, J.
登録日2022-04-13
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Enzymatic C3-Methylation of Indoles Using Methyltransferase PsmD-Crystal Structure, Catalytic Mechanism, and Preparative Applications
Acs Catalysis, 2022
7ZIM
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JC Polyomavirus VP1 in complex with 3'-Sialyllactose glycomacromolecules (aromatic linker)
分子名称: DI(HYDROXYETHYL)ETHER, Major capsid protein VP1, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ...
著者Freytag, J, Mueller, J.C, Stehle, T.
登録日2022-04-08
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Synthesis of Homo- and Heteromultivalent Fucosylated and Sialylated Oligosaccharide Conjugates via Preactivated N -Methyloxyamine Precision Macromolecules and Their Binding to Polyomavirus Capsid Proteins.
Biomacromolecules, 23, 2022
7FDJ
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Engineered Hepatitis B virus core antigen with short linker T=4
分子名称: Capsid protein,Immunoglobulin G-binding protein A
著者Jeong, H, Heo, Y, Yoo, Y, Ryu, B, Yun, J, Cho, H, Lee, W.
登録日2021-07-16
公開日2021-09-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural and Functional Characterizations of Cancer Targeting Nanoparticles Based on Hepatitis B Virus Capsid.
Int J Mol Sci, 22, 2021
3ME3
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Activator-Bound Structure of Human Pyruvate Kinase M2
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, 3-{[4-(2,3-dihydro-1,4-benzodioxin-6-ylsulfonyl)-1,4-diazepan-1-yl]sulfonyl}aniline, Pyruvate kinase isozymes M1/M2, ...
著者Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
登録日2010-03-31
公開日2010-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Pyruvate kinase M2 activators promote tetramer formation and suppress tumorigenesis.
Nat.Chem.Biol., 8, 2012
7EP6
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Engineered Hepatitis B virus core antigen T=4
分子名称: Capsid protein,Immunoglobulin G-binding protein A
著者Jeong, H, Heo, Y, Yoo, Y, Ryu, B, Yun, J, Cho, H, Lee, W.
登録日2021-04-26
公開日2021-09-01
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Structural and Functional Characterizations of Cancer Targeting Nanoparticles Based on Hepatitis B Virus Capsid.
Int J Mol Sci, 22, 2021
1JIV
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T4 phage BGT in complex with Mg2+ : Form II
分子名称: DNA BETA-GLUCOSYLTRANSFERASE, MAGNESIUM ION, URIDINE-5'-DIPHOSPHATE
著者Morera, S, Lariviere, L, Kurzeck, J, Aschke-Sonnenborn, U, Freemont, P.S, Janin, J, Ruger, W.
登録日2001-07-03
公開日2001-08-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献High resolution crystal structures of T4 phage beta-glucosyltransferase: induced fit and effect of substrate and metal binding.
J.Mol.Biol., 311, 2001
7ZIO
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JC Polyomavirus VP1 in complex with 6'-Sialyllactose glycomacromolecules (aromatic linker)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Freytag, J, Mueller, J.C, Stehle, T.
登録日2022-04-08
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献Synthesis of Homo- and Heteromultivalent Fucosylated and Sialylated Oligosaccharide Conjugates via Preactivated N -Methyloxyamine Precision Macromolecules and Their Binding to Polyomavirus Capsid Proteins.
Biomacromolecules, 23, 2022
7T26
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Structure of phage FBB1 anti-CBASS nuclease Acb1 in apo state
分子名称: Acb1
著者Hobbs, S.J, Wein, T, Lu, A, Morehouse, B.R, Schnabel, J, Sorek, R, Kranzusch, P.J.
登録日2021-12-03
公開日2022-04-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Phage anti-CBASS and anti-Pycsar nucleases subvert bacterial immunity.
Nature, 605, 2022
7ZQV
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Structure of the SARS-CoV-2 main protease in complex with AG7404
分子名称: 3C-like proteinase nsp5, ethyl (4R)-4-({(2S)-2-[3-{[(5-methyl-1,2-oxazol-3-yl)carbonyl]amino}-2-oxopyridin-1(2H)-yl]pent-4-ynoyl}amino)-5-[(3S)-2-oxopyrrolidin-3-yl]pentanoate
著者Fabrega-Ferrer, M, Herrera-Morande, A, Perez-Saavedra, J, Coll, M.
登録日2022-05-03
公開日2022-12-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure and inhibition of SARS-CoV-1 and SARS-CoV-2 main proteases by oral antiviral compound AG7404.
Antiviral Res., 208, 2022
7ZIN
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JC Polyomavirus VP1 in complex with 6'-Sialyllactose glycomacromolecules (aliphatic linker)
分子名称: 1,2-ETHANEDIOL, Major capsid protein VP1, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
著者Freytag, J, Mueller, J.C, Stehle, T.
登録日2022-04-08
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.648 Å)
主引用文献Synthesis of Homo- and Heteromultivalent Fucosylated and Sialylated Oligosaccharide Conjugates via Preactivated N -Methyloxyamine Precision Macromolecules and Their Binding to Polyomavirus Capsid Proteins.
Biomacromolecules, 23, 2022
2Z8F
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The galacto-N-biose-/lacto-N-biose I-binding protein (GL-BP) of the ABC transporter from Bifidobacterium longum in complex with lacto-N-tetraose
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Galacto-N-biose/lacto-N-biose I transporter substrate-binding protein, SODIUM ION, ...
著者Suzuki, R, Wada, J, Katayama, T, Fushinobu, S.
登録日2007-09-05
公開日2008-03-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and thermodynamic analyses of solute-binding Protein from Bifidobacterium longum specific for core 1 disaccharide and lacto-N-biose I.
J.Biol.Chem., 283, 2008
7ZIL
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JC Polyomavirus VP1 in complex with 3'-Sialyllactose glycomacromolecules (aliphatic linker)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Freytag, J, Mueller, J.C, Stehle, T.
登録日2022-04-08
公開日2022-12-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Synthesis of Homo- and Heteromultivalent Fucosylated and Sialylated Oligosaccharide Conjugates via Preactivated N -Methyloxyamine Precision Macromolecules and Their Binding to Polyomavirus Capsid Proteins.
Biomacromolecules, 23, 2022
3V96
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Complex of matrix metalloproteinase-10 catalytic domain (MMP-10cd) with tissue inhibitor of metalloproteinases-1 (TIMP-1)
分子名称: CALCIUM ION, Metalloproteinase inhibitor 1, PHOSPHATE ION, ...
著者Batra, J, Soares, A.S, Radisky, E.S.
登録日2011-12-23
公開日2012-03-28
最終更新日2012-07-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Matrix metalloproteinase-10 (MMP-10) interaction with tissue inhibitors of metalloproteinases TIMP-1 and TIMP-2: binding studies and crystal structure.
J.Biol.Chem., 287, 2012
7T5H
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Structure of rabies virus phosphoprotein C-terminal domain, wild type
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, Phosphoprotein, ...
著者Zhan, J, Metcalfe, R.D, Gooley, P.R, Griffin, M.D.W.
登録日2021-12-12
公開日2022-04-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Molecular Basis of Functional Effects of Phosphorylation of the C-Terminal Domain of the Rabies Virus P Protein.
J.Virol., 96, 2022
6NO4
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ADP bound to L227bF mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Succinate--CoA ligase [ADP-forming] subunit beta
著者Huang, J, Fraser, M.E.
登録日2019-01-15
公開日2019-07-17
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献ATP-specificity of succinyl-CoA synthetase from Blastocystis hominis.
Acta Crystallogr D Struct Biol, 75, 2019

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