Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42254 件

4YTB
DownloadVisualize
BU of 4ytb by Molmil
Crystal structure of Porphyromonas gingivalis peptidylarginine deiminase (PPAD) in complex with dipeptide Asp-Gln.
分子名称: ASPARTIC ACID, AZIDE ION, CHLORIDE ION, ...
著者Goulas, T, Mizgalska, D, Garcia-Ferrer, I, Kantyka, T, Guevara, T, Szmigielski, B, Sroka, A, Millan, C, Uson, I, Veillard, F, Potempa, B, Mydel, P, Sola, M, Potempa, J, Gomis-Ruth, F.X.
登録日2015-03-17
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure and mechanism of a bacterial host-protein citrullinating virulence factor, Porphyromonas gingivalis peptidylarginine deiminase.
Sci Rep, 5, 2015
1PVA
DownloadVisualize
BU of 1pva by Molmil
COMPARISON BETWEEN THE CRYSTAL AND THE SOLUTION STRUCTURES OF THE EF HAND PARVALBUMIN (ALPHA COMPONENT FROM PIKE MUSCLE)
分子名称: CALCIUM ION, PARVALBUMIN
著者Declercq, J.P, Tinant, B, Roquet, F, Rambaud, J, Parello, J.
登録日1995-01-16
公開日1995-03-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Comparison between the Crystal and the Solution Structures of the EF Hand Parvalbumin (Alpha Component from Pike Muscle)
To be Published
4YNY
DownloadVisualize
BU of 4yny by Molmil
Crystal structure of monoclonal anti-human podoplanin antibody NZ-1
分子名称: Heavy chain of antigen binding fragment, Fab, Light chain of antigen binding fragment
著者Fujii, Y, Kitago, Y, Arimori, T, Takagi, J.
登録日2015-03-11
公開日2016-03-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.584 Å)
主引用文献Tailored placement of a turn-forming PA tag into the structured domain of a protein to probe its conformational state
J.Cell.Sci., 129, 2016
7CN8
DownloadVisualize
BU of 7cn8 by Molmil
Cryo-EM structure of PCoV_GX spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, ...
著者Wang, X, Yu, J, Zhang, S, Qiao, S, Zeng, J, Tian, L.
登録日2020-07-30
公開日2021-03-03
最終更新日2021-03-24
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Bat and pangolin coronavirus spike glycoprotein structures provide insights into SARS-CoV-2 evolution.
Nat Commun, 12, 2021
2PUV
DownloadVisualize
BU of 2puv by Molmil
The crystal structure of isomerase domain of glucosamine-6-phosphate synthase from Candida albicans
分子名称: 5-AMINO-5-DEOXY-1-O-PHOSPHONO-D-MANNITOL, ACETATE ION, SODIUM ION, ...
著者Raczynska, J, Olchowy, J, Milewski, S, Rypniewski, W.
登録日2007-05-09
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
4YTG
DownloadVisualize
BU of 4ytg by Molmil
Crystal structure of Porphyromonas gingivalis peptidylarginine deiminase (PPAD) mutant C351A in complex with dipeptide Met-Arg.
分子名称: ARGININE, AZIDE ION, CHLORIDE ION, ...
著者Goulas, T, Mizgalska, D, Garcia-Ferrer, I, Kantyka, T, Guevara, T, Szmigielski, B, Sroka, A, Millan, C, Uson, I, Veillard, F, Potempa, B, Mydel, P, Sola, M, Potempa, J, Gomis-Ruth, F.X.
登録日2015-03-17
公開日2015-07-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and mechanism of a bacterial host-protein citrullinating virulence factor, Porphyromonas gingivalis peptidylarginine deiminase.
Sci Rep, 5, 2015
7CN4
DownloadVisualize
BU of 7cn4 by Molmil
Cryo-EM structure of bat RaTG13 spike glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wang, X, Zhang, S, Qiao, S, Yu, J, Zeng, J, Tian, L.
登録日2020-07-30
公開日2021-03-03
最終更新日2021-03-24
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Bat and pangolin coronavirus spike glycoprotein structures provide insights into SARS-CoV-2 evolution.
Nat Commun, 12, 2021
4YUG
DownloadVisualize
BU of 4yug by Molmil
Multiconformer synchrotron model of CypA at 100 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUL
DownloadVisualize
BU of 4yul by Molmil
Multiconformer synchrotron model of CypA at 280 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
6C0F
DownloadVisualize
BU of 6c0f by Molmil
Yeast nucleolar pre-60S ribosomal subunit (state 2)
分子名称: 5.8S rRNA, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ...
著者Sanghai, Z.A, Miller, L, Barandun, J, Hunziker, M, Chaker-Margot, M, Klinge, S.
登録日2017-12-29
公開日2018-03-14
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Modular assembly of the nucleolar pre-60S ribosomal subunit.
Nature, 556, 2018
5JID
DownloadVisualize
BU of 5jid by Molmil
Crystal Structure of Human Transthyretin in Complex with Perfluorooctanoic acid (PFOA)
分子名称: SODIUM ION, Transthyretin, pentadecafluorooctanoic acid
著者Begum, A, Zhang, J, Olofsson, A, Andersson, P, Sauer-Eriksson, A.E.
登録日2016-04-22
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure-Based Virtual Screening Protocol for in Silico Identification of Potential Thyroid Disrupting Chemicals Targeting Transthyretin.
Environ. Sci. Technol., 50, 2016
1JF0
DownloadVisualize
BU of 1jf0 by Molmil
The Crystal Structure of Obelin from Obelia geniculata at 1.82 A Resolution
分子名称: C2-HYDROPEROXY-COELENTERAZINE, Obelin
著者Deng, L, Vysotski, E, Liu, Z.-J, Markova, S, Lee, J, Rose, J, Wang, B.-C.
登録日2001-06-19
公開日2001-07-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献The Crystal Structure of Obelin from Obelia geniculata at 1.82 Angstrom Resolution
To be Published
7VKK
DownloadVisualize
BU of 7vkk by Molmil
Crystal structure of D. melanogaster SAMTOR V66W/E67P mutant
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, S-adenosylmethionine sensor upstream of mTORC1, SULFATE ION
著者Zhang, T, Ding, J.
登録日2021-09-30
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Molecular mechanism of S -adenosylmethionine sensing by SAMTOR in mTORC1 signaling.
Sci Adv, 8, 2022
2APN
DownloadVisualize
BU of 2apn by Molmil
hi1723 solution structure
分子名称: Protein HI1723
著者He, Y, Yeh, D.C, Orban, J, Structure 2 Function Project (S2F)
登録日2005-08-16
公開日2006-10-03
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of HI1723 From Haemophilus Influenzae
To be Published
4Z0O
DownloadVisualize
BU of 4z0o by Molmil
CW-type zinc finger of ZCWPW2 with F78D mutation
分子名称: SODIUM ION, UNKNOWN ATOM OR ION, ZINC ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献CW-type zinc finger of ZCWPW2 with F78D mutation
To be Published
4Z0R
DownloadVisualize
BU of 4z0r by Molmil
Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
分子名称: 1,2-ETHANEDIOL, Histone H3.1, SULFATE ION, ...
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-03-26
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of the CW domain of ZCWPW2 mutant F78R in complex with histone H3 peptide
To be Published
6ATF
DownloadVisualize
BU of 6atf by Molmil
HLA-DRB1*1402 in complex with Vimentin59-71
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Scally, S.W, Ting, Y.T, Rossjohn, J.
登録日2017-08-29
公開日2017-09-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular basis for increased susceptibility of Indigenous North Americans to seropositive rheumatoid arthritis.
Ann. Rheum. Dis., 76, 2017
4YYX
DownloadVisualize
BU of 4yyx by Molmil
Crystal structure of the ZO-1 PDZ1 domain in complex with the 7-mer Claudin2 C-terminal tail
分子名称: FORMIC ACID, Tight junction protein ZO-1 fused with Claudin-2 C-terminal
著者Nomme, J, Lavie, A.
登録日2015-03-24
公開日2015-04-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural Basis of a Key Factor Regulating the Affinity between the Zonula Occludens First PDZ Domain and Claudins.
J.Biol.Chem., 290, 2015
7VIL
DownloadVisualize
BU of 7vil by Molmil
Solution structure of subunit epsilon of the Mycobacterium abscessus F-ATP synthase
分子名称: ATP synthase epsilon chain
著者Shin, J, Grueber, G, Wong, C.F.
登録日2021-09-27
公開日2022-10-05
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Atomic solution structure of Mycobacterium abscessus F-ATP synthase subunit epsilon and identification of Ep1MabF1 as a targeted inhibitor.
Febs J., 289, 2022
7VKR
DownloadVisualize
BU of 7vkr by Molmil
Crystal structure of D. melanogaster SAMTOR in complex with SAM
分子名称: CITRIC ACID, S-ADENOSYLMETHIONINE, S-adenosylmethionine sensor upstream of mTORC1
著者Tang, X, Zhang, T, Ding, J.
登録日2021-09-30
公開日2022-07-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular mechanism of S -adenosylmethionine sensing by SAMTOR in mTORC1 signaling.
Sci Adv, 8, 2022
6AWU
DownloadVisualize
BU of 6awu by Molmil
Structure of PR 10 Allergen Ara h 8.01 in complex with caffeic acid
分子名称: Ara h 8 allergen, CAFFEIC ACID, CHLORIDE ION, ...
著者Offermann, L.R, McBride, J, Perdue, M, Hurlburt, B.K, Maleki, S.J, Pote, S.S, Chruszcz, M.
登録日2017-09-06
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure of PR-10 Allergen Ara h 8.01.
To Be Published
7VKQ
DownloadVisualize
BU of 7vkq by Molmil
Crystal structure of D. melanogaster SAMTOR in the SAH bound form
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, S-adenosylmethionine sensor upstream of mTORC1
著者Tang, X, Zhang, T, Ding, J.
登録日2021-09-30
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.094 Å)
主引用文献Molecular mechanism of S -adenosylmethionine sensing by SAMTOR in mTORC1 signaling.
Sci Adv, 8, 2022
2O52
DownloadVisualize
BU of 2o52 by Molmil
Crystal structure of human RAB4B in complex with GDP
分子名称: BETA-MERCAPTOETHANOL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Zhu, H, Tempel, W, Wang, J, Shen, Y, Landry, R, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
登録日2006-12-05
公開日2006-12-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of human RAB4B in complex with GDP
To be Published
2GEK
DownloadVisualize
BU of 2gek by Molmil
Crystal Structure of phosphatidylinositol mannosyltransferase (PimA) from Mycobacterium smegmatis in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, PHOSPHATIDYLINOSITOL MANNOSYLTRANSFERASE (PimA)
著者Guerin, M.E, Buschiazzo, A, Kordulakova, J, Jackson, M, Alzari, P.M.
登録日2006-03-20
公開日2007-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular recognition and interfacial catalysis by the essential phosphatidylinositol mannosyltransferase PimA from mycobacteria.
J.Biol.Chem., 282, 2007
4Z1E
DownloadVisualize
BU of 4z1e by Molmil
Carbonic anhydrase inhibitors: Design and synthesis of new heteroaryl-N-carbonylbenzenesulfonamides targeting druggable human carbonic anhydrase isoforms (hCA VII, hCA IX, and hCA XIV)
分子名称: 6-methoxy-1-(4-sulfamoylbenzoyl)quinolinium, Carbonic anhydrase 2, ZINC ION
著者Brynda, J, Pospisilova, K, Rezacova, P, Pachl, P.
登録日2015-03-27
公開日2015-08-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Carbonic anhydrase inhibitors: Design, synthesis and structural characterization of new heteroaryl-N-carbonylbenzenesulfonamides targeting druggable human carbonic anhydrase isoforms.
Eur.J.Med.Chem., 102, 2015

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon