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PDB: 42550 件

3WLC
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Crystal structure of dimeric GCaMP6m
分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ...
著者Ding, J, Luo, A.F, Hu, L.Y, Wang, D.C, Shao, F.
登録日2013-11-08
公開日2014-01-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural basis of the ultrasensitive calcium indicator GCaMP6.
Sci China Life Sci, 57, 2014
3WOV
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Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (PaAglB-L, Q9V250_PYRAB, PAB2202) from Pyrococcus abyssi
分子名称: CALCIUM ION, Oligosaccharyl transferase
著者Matsuoka, R, Nyirenda, J, Maita, N, Kohda, D.
登録日2014-01-05
公開日2014-01-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Crystal structure of the C-terminal globular domain of oligosaccharyltransferase (PaAglB-L, Q9V250_PYRAB, PAB2202) from Pyrococcus abyssi
To be Published
3WMJ
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Crystal structure of EIAV vaccine gp45
分子名称: EIAV vaccine gp45
著者Liu, X, Du, J, Qiao, W.
登録日2013-11-19
公開日2014-11-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献A mutation associated with EIAV vaccine strain within heptad repeat of EIAV gp45 provides insight into vaccine development for HIV
To be Published
3J7A
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Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit
分子名称: 18S ribosomal RNA, 40S ribosomal protein eS1, 40S ribosomal protein eS10, ...
著者Wong, W, Bai, X.C, Brown, A, Fernandez, I.S, Hanssen, E, Condron, M, Tan, Y.H, Baum, J, Scheres, S.H.W.
登録日2014-06-03
公開日2014-07-16
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine.
Elife, 3, 2014
3J8V
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Cryo-EM reconstruction of quasi-HPV16 complex with H16.14J Fab
分子名称: H16.14J heavy chain, H16.14J light chain, L1
著者Guan, J, Hafenstein, S.
登録日2014-11-19
公開日2015-05-06
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (13.9 Å)
主引用文献Structural comparison of four different antibodies interacting with human papillomavirus 16 and mechanisms of neutralization.
Virology, 483, 2015
3JU3
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Crystal structure of alpha chain of probable 2-oxoacid ferredoxin oxidoreductase from Thermoplasma acidophilum
分子名称: 1,2-ETHANEDIOL, Probable 2-oxoacid ferredoxin oxidoreductase, alpha chain
著者Chang, C, Marshall, N, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-09-14
公開日2009-09-22
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of alpha chain of probable 2-oxoacid ferredoxin oxidoreductase from Thermoplasma acidophilum
To be Published
1UF2
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BU of 1uf2 by Molmil
The Atomic Structure of Rice dwarf Virus (RDV)
分子名称: Core protein P3, Outer capsid protein P8, Structural protein P7
著者Nakagawa, A, Miyazaki, N, Taka, J, Naitow, H, Ogawa, A, Fujimoto, Z, Mizuno, H, Higashi, T, Watanabe, Y, Omura, T, Cheng, R.H, Tsukihara, T.
登録日2003-05-23
公開日2003-10-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins.
Structure, 11, 2003
3WV5
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Complex structure of VinN with 3-methylaspartate
分子名称: (2S,3S)-3-methyl-aspartic acid, Non-ribosomal peptide synthetase
著者Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2014-05-15
公開日2014-10-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3JXR
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X-Ray structure of r[CGCG(5-fluoro)CG]2
分子名称: r[CGCG(5-fluoro)CG]2
著者Adamiak, D.A, Milecki, J, Adamiak, R.W, Rypniewski, W.
登録日2009-09-21
公開日2010-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The hydration and unusual hydrogen bonding in the crystal structure of an RNA duplex containing alternating CG base pairs
New J.Chem., 34, 2010
3W77
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Crystal Structure of azoreductase AzrA
分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase
著者Ogata, D, Yu, J, Ooi, T, Yao, M.
登録日2013-02-27
公開日2014-02-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
3JBU
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Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Zhang, J, Pan, X.J, Yan, K.G, Sun, S, Gao, N, Sui, S.F.
登録日2015-10-16
公開日2016-01-27
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Mechanisms of ribosome stalling by SecM at multiple elongation steps
Elife, 4, 2015
3JD0
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Glutamate dehydrogenase in complex with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Glutamate dehydrogenase 1, mitochondrial
著者Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S.
登録日2016-03-28
公開日2016-04-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase.
Mol.Pharmacol., 89, 2016
3JD4
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Glutamate dehydrogenase in complex with NADH and GTP, closed conformation
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GUANOSINE-5'-TRIPHOSPHATE, Glutamate dehydrogenase 1, ...
著者Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S.
登録日2016-03-28
公開日2016-04-27
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase.
Mol.Pharmacol., 89, 2016
3WMK
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BU of 3wmk by Molmil
Crystal structure of Hen egg-white lysozyme in pH 4.5 Sodium Acetatewith 1M NaCl at 277K
分子名称: Lysozyme C
著者Lim, H, Rho, J, Hyun, J.K, Kim, Y.J.
登録日2013-11-19
公開日2014-10-08
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Crystal structure of Hen egg-white lysozyme in pH 4.5 Sodium Acetatewith 1M NaCl at 277K
TO BE PUBLISHED
3WWH
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Crystal structure of the first R-stereoselective -transaminase identified from Arthrobacter sp. KNK168 (FERM-BP-5228)
分子名称: (R)-amine transaminase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
著者Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Ito, N, Yasohara, Y, Tanokura, M.
登録日2014-06-18
公開日2015-08-12
最終更新日2018-11-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
1P0C
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Crystal Structure of the NADP(H)-Dependent Vertebrate Alcohol Dehydrogenase (ADH8)
分子名称: GLYCEROL, NADP-dependent ALCOHOL DEHYDROGENASE, PHOSPHATE ION, ...
著者Rosell, A, Valencia, E, Pares, X, Fita, I, Farres, J, Ochoa, W.F.
登録日2003-04-10
公開日2003-04-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of the Vertebrate NADP(H)-dependent Alcohol Dehydrogenase (ADH8)
J.Mol.Biol., 330, 2003
1R65
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Crystal structure of ferrous soaked Ribonucleotide Reductase R2 subunit (wildtype) at pH 5 from E. coli
分子名称: FE (II) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
著者Voegtli, W.C, Sommerhalter, M, Saleh, L, Baldwin, J, Bollinger Jr, J.M, Rosenzweig, A.C.
登録日2003-10-14
公開日2004-01-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003
1RB0
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CRYSTAL STRUCTURE OF A BINARY COMPLEX OF E. COLI HPPK WITH 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE AT 1.35 ANGSTROM RESOLUTION
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE
著者Blaszczyk, J, Ji, X.
登録日2003-10-31
公開日2004-11-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Reaction trajectory of pyrophosphoryl transfer catalyzed by 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase.
Structure, 12, 2004
3W5A
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Crystal structure of the calcium pump and sarcolipin from rabbit fast twitch skeletal muscle in the E1.Mg2+ state
分子名称: 2',3'-O-[(1r)-2,4,6-trinitrocyclohexa-2,5-diene-1,1-diyl]adenosine 5'-(dihydrogen phosphate), MAGNESIUM ION, PHOSPHATIDYLETHANOLAMINE, ...
著者Toyoshima, C, Iwasawa, S, Ogawa, H, Hirata, A, Tsueda, J, Inesi, G.
登録日2013-01-27
公開日2013-03-06
最終更新日2013-03-27
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
3JAH
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Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
著者Brown, A, Shao, S, Murray, J, Hegde, R.S, Ramakrishnan, V.
登録日2015-06-10
公開日2015-08-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural basis for stop codon recognition in eukaryotes.
Nature, 524, 2015
3JC1
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Electron cryo-microscopy of the IST1-CHMP1B ESCRT-III copolymer
分子名称: Charged multivesicular body protein 1b, Increased Sodium Tolerance 1 (IST1)
著者McCullough, J, Clippinger, A.K, Talledge, N, Skowyra, M.L, Saunders, M.G, Naismith, T.V, Colf, L.A, Afonine, P, Arthur, C, Sundquist, W.I, Hanson, P.I, Frost, A.
登録日2015-11-09
公開日2015-12-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure and membrane remodeling activity of ESCRT-III helical polymers.
Science, 350, 2015
3WV4
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Crystal structure of VinN
分子名称: Non-ribosomal peptide synthetase
著者Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2014-05-15
公開日2014-10-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3WVN
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Complex structure of VinN with L-aspartate
分子名称: ASPARTIC ACID, Non-ribosomal peptide synthetase
著者Miyanaga, A, Cieslak, J, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2014-05-30
公開日2014-10-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of the adenylation enzyme VinN reveals a unique beta-amino acid recognition mechanism
J.Biol.Chem., 289, 2014
3JQW
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Crystal structure of Clostridium histolyticum colH collagenase collagen-binding domain 3 at 2 Angstrom resolution in presence of calcium
分子名称: CALCIUM ION, ColH protein
著者Sakon, J, Philominathan, S.T.L, Matsushita, O, Bauer, R.
登録日2009-09-08
公開日2010-09-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Comparison of ColH and ColG Collagen-Binding Domains from Clostridium histolyticum.
J.Bacteriol., 195, 2013
3K3E
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Crystal structure of the PDE9A catalytic domain in complex with (R)-BAY73-6691
分子名称: 1-(2-chlorophenyl)-6-[(2R)-3,3,3-trifluoro-2-methylpropyl]-1,7-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one, High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
著者Wang, H, Luo, X, Ye, M, Hou, J, Robinson, H, Ke, H.
登録日2009-10-02
公開日2010-02-16
最終更新日2013-11-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Insight into Binding of Phosphodiesterase-9A Selective Inhibitors by Crystal Structures and Mutagenesis
J.Med.Chem., 53, 2010

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件を2024-08-21に公開中

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