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PDB: 42622 results

1WAD
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BU of 1wad by Molmil
CYTOCHROME C3 WITH 4 HEME GROUPS AND ONE CALCIUM ION
Descriptor: CALCIUM ION, CYTOCHROME C3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Matias, P.M, Morais, J, Coelho, R, Carrondo, M.A, Wilson, K, Dauter, Z, Sieker, L.
Deposit date:1996-01-10
Release date:1997-01-27
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cytochrome c3 from Desulfovibrio gigas: crystal structure at 1.8 A resolution and evidence for a specific calcium-binding site.
Protein Sci., 5, 1996
3UM8
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BU of 3um8 by Molmil
Wild-type Plasmodium falciparum DHFR-TS complexed with cycloguanil and NADPH
Descriptor: 1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine, Bifunctional dihydrofolate reductase-thymidylate synthase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Vanichtanankul, J, Chitnumsub, P, Kamchonwongpaisan, S, Yuthavong, Y.
Deposit date:2011-11-12
Release date:2012-07-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Combined Spatial Limitation around Residues 16 and 108 of Plasmodium falciparum Dihydrofolate Reductase Explains Resistance to Cycloguanil.
Antimicrob.Agents Chemother., 56, 2012
6XWY
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BU of 6xwy by Molmil
Highly pH-resistant long stokes-shift, red fluorescent protein mCRISPRed
Descriptor: 1,2-ETHANEDIOL, MALONIC ACID, Red fluorescent protein eqFP611
Authors:Erdogan, M, Fabritius, A, Basquin, J, Griesbeck, O.
Deposit date:2020-01-24
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Targeted In Situ Protein Diversification and Intra-organelle Validation in Mammalian Cells.
Cell Chem Biol, 27, 2020
3UCB
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BU of 3ucb by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20 in Complex with Darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:Agniswamy, J, Chen-Hsiang, S, Aniana, A, Sayer, J.M, Louis, J.M, Weber, I.T.
Deposit date:2011-10-26
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:HIV-1 protease with 20 mutations exhibits extreme resistance to clinical inhibitors through coordinated structural rearrangements.
Biochemistry, 51, 2012
6XPG
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BU of 6xpg by Molmil
Crystal Structure of Sialate O-acetylesterase from Bacteroides vulgatus by Serial Crystallography
Descriptor: Lysophospholipase L1
Authors:Kim, Y, Sherrell, D.A, Owen, R, Axford, D, Ebrahim, A, Johnson, J, Welk, L, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2020-07-08
Release date:2020-07-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Sialate O-acetylesterase from Bacteroides vulgatus by Serial Crystallography
To Be Published
1WDW
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BU of 1wdw by Molmil
Structural basis of mutual activation of the tryptophan synthase a2b2 complex from a hyperthermophile, Pyrococcus furiosus
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Tryptophan synthase alpha chain, Tryptophan synthase beta chain 1
Authors:Lee, S.J, Ogasahara, K, Ma, J, Nishio, K, Ishida, M, Yamagata, Y, Tsukihara, T, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-19
Release date:2005-07-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Conformational Changes in the Tryptophan Synthase from a Hyperthermophile upon alpha(2)beta(2) Complex Formation: Crystal Structure of the Complex
Biochemistry, 44, 2005
3UF5
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BU of 3uf5 by Molmil
Crystal structure of the mouse Colony-Stimulating Factor 1 (mCSF-1) cytokine
Descriptor: CALCIUM ION, Macrophage colony-stimulating factor 1
Authors:Elegheert, J, Bracke, N, Bekaert, A, Savvides, S.N.
Deposit date:2011-10-31
Release date:2012-08-22
Last modified:2013-07-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Allosteric competitive inactivation of hematopoietic CSF-1 signaling by the viral decoy receptor BARF1
Nat.Struct.Mol.Biol., 19, 2012
3UFN
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BU of 3ufn by Molmil
Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical Isolate PR20 in Complex with Saquinavir
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, CHLORIDE ION, HIV-1 protease
Authors:Agniswamy, J, Chen-Hsiang, S, Aniana, A, Sayer, J.M, Louis, J.M, Weber, I.T.
Deposit date:2011-11-01
Release date:2012-03-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:HIV-1 protease with 20 mutations exhibits extreme resistance to clinical inhibitors through coordinated structural rearrangements.
Biochemistry, 51, 2012
3UF0
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BU of 3uf0 by Molmil
Crystal structure of a putative NAD(P) dependent gluconate 5-dehydrogenase from Beutenbergia cavernae(EFI target EFI-502044) with bound NADP (low occupancy)
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Short-chain dehydrogenase/reductase SDR
Authors:Vetting, M.W, Toro, R, Bhosle, R, Hillerich, B, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2011-10-31
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative NAD(P) dependent gluconate 5-dehydrogenase from Beutenbergia cavernae(EFI target EFI-502044) with bound NADP (low occupancy)
To be Published
3UIG
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BU of 3uig by Molmil
crystal structure of human Survivin in complex with T3 phosphorylated H3(1-15) peptide
Descriptor: Baculoviral IAP repeat-containing protein 5, T3 phosphorylated H3(1-15) peptide, ZINC ION
Authors:Du, J, Patel, D.J.
Deposit date:2011-11-04
Release date:2012-02-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Recognition of H3T3ph and Smac/DIABLO N-terminal Peptides by Human Survivin.
Structure, 20, 2012
7S0Y
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BU of 7s0y by Molmil
Structures of TcdB in complex with Cdc42
Descriptor: Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zheng, L, Rongsheng, J, Peng, C.
Deposit date:2021-08-31
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B.
Sci Adv, 7, 2021
7S0Z
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BU of 7s0z by Molmil
Structures of TcdB in complex with R-Ras
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, AMMONIUM ION, ...
Authors:Zheng, L, Rongsheng, J, Peng, C.
Deposit date:2021-08-31
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural basis for selective modification of Rho and Ras GTPases by Clostridioides difficile toxin B.
Sci Adv, 7, 2021
3USJ
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BU of 3usj by Molmil
Crystal structure of LeuT bound to L-leucine in space group P21 from lipid bicelles
Descriptor: LEUCINE, SODIUM ION, Transporter
Authors:Wang, H, Elferich, J, Gouaux, E.
Deposit date:2011-11-23
Release date:2012-01-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structures of LeuT in bicelles define conformation and substrate binding in a membrane-like context.
Nat.Struct.Mol.Biol., 19, 2012
3UJ3
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BU of 3uj3 by Molmil
Crystal Structure of the synaptic tetramer of the G-Segment Invertase (Gin)
Descriptor: DNA-invertase
Authors:Ritacco, C.J, Wang, J, Kamtekar, S, Steitz, T.A.
Deposit date:2011-11-07
Release date:2012-12-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Crystal structure of an intermediate of rotating dimers within the synaptic tetramer of the G-segment invertase.
Nucleic Acids Res., 41, 2013
6XA4
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BU of 6xa4 by Molmil
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with UAW241
Descriptor: 3C-like proteinase, GLYCEROL, inhibitor UAW241
Authors:Sacco, M, Ma, C, Wang, J, Chen, Y.
Deposit date:2020-06-03
Release date:2020-06-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and inhibition of the SARS-CoV-2 main protease reveal strategy for developing dual inhibitors against M pro and cathepsin L.
Sci Adv, 6, 2020
6XJI
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BU of 6xji by Molmil
PmtCD ABC exporter at C1 symmetry
Descriptor: ABC transporter ATP-binding protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Zeytuni, N, Strynadka, N.J.C, Hu, J, Worrall, L.J, Chou, H, Yu, Z.
Deposit date:2020-06-23
Release date:2020-10-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural insight into the Staphylococcus aureus ATP-driven exporter of virulent peptide toxins
Sci Adv, 6, 2020
4UIL
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BU of 4uil by Molmil
crystal structure of quinine-dependent Fab 314.1 with quinine
Descriptor: FAB 314.1, Quinine
Authors:Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
Deposit date:2015-03-30
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.853 Å)
Cite:Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015
4UIM
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BU of 4uim by Molmil
crystal structure of quinine-dependent Fab 314.3
Descriptor: FAB 314.3, SULFATE ION
Authors:Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
Deposit date:2015-03-30
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015
4UIJ
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BU of 4uij by Molmil
Crystal structure of the BTB domain of KCTD13
Descriptor: BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN 1, CHLORIDE ION
Authors:Pinkas, D.M, Sanvitale, C.E, Sorell, F.J, Solcan, N, Goubin, S, Canning, P, Williams, E, Chaikuad, A, Dixon Clarke, S.E, Tallant, C, Fonseca, M, Chalk, R, Doutch, J, Krojer, T, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2015-03-30
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases.
Biochem. J., 474, 2017
7S3F
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BU of 7s3f by Molmil
Structure of cofactor pyridoxal 5-phosphate bound human ornithine decarboxylase in complex with its inhibitor 1-amino-oxy-3-aminopropane
Descriptor: 3-AMINOOXY-1-AMINOPROPANE, Ornithine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Zhou, X.E, Suino-Powell, K, Schultz, C.R, Aleiwi, B, Brunzelle, J.S, Lamp, J, Vega, I.E, Ellsworth, E, Bachmann, A.S, Melcher, K.
Deposit date:2021-09-06
Release date:2021-12-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis of binding and inhibition of ornithine decarboxylase by 1-amino-oxy-3-aminopropane.
Biochem.J., 478, 2021
4UIK
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BU of 4uik by Molmil
crystal structure of quinine-dependent Fab 314.1
Descriptor: FAB 314.1
Authors:Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
Deposit date:2015-03-30
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015
7SJR
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BU of 7sjr by Molmil
Cryo-EM structure of AdnA-AdnB(W325A) in complex with DNA and AMPPNP
Descriptor: DNA (70-MER), DNA helicase, IRON/SULFUR CLUSTER, ...
Authors:Wang, J, Warren, G.M, Shuman, S, Patel, D.J.
Deposit date:2021-10-18
Release date:2021-12-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure-activity relationships at a nucleobase-stacking tryptophan required for chemomechanical coupling in the DNA resecting motor-nuclease AdnAB.
Nucleic Acids Res., 50, 2022
4UQ3
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BU of 4uq3 by Molmil
Crystal structure of HLA-A0201 in complex with an azobenzene- containing peptide
Descriptor: AZOBENZENE-CONTAINING PEPTIDE, BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Thong, S.Y, Yap, J.W, Lim, P.Y, Verhelst, S.H, Lescar, J, Meijers, R, Grotenbreg, G.M.
Deposit date:2014-06-19
Release date:2014-09-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bioorthogonal cleavage and exchange of major histocompatibility complex ligands by employing azobenzene-containing peptides.
Angew. Chem. Int. Ed. Engl., 53, 2014
4UIN
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BU of 4uin by Molmil
crystal structure of quinine-dependent Fab 314.3 with quinine
Descriptor: FAB 314.3, Quinine
Authors:Zhu, J, Zhu, J, Bougie, D.W, Aster, R.H, Springer, T.A.
Deposit date:2015-03-30
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Quinine-Dependent Antibody Binding to Platelet Integrin Alphaiib Beta3
Blood, 126, 2015
4UQ2
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BU of 4uq2 by Molmil
Crystal structure of HLA-A1101 in complex with an azobenzene- containing peptide
Descriptor: AZOBENZENE-CONTAINING PEPTIDE, BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Thong, S.Y, Yap, J.W, Lim, P.Y, Verhelst, S.H, Lescar, J, Meijers, R, Grotenbreg, G.M.
Deposit date:2014-06-19
Release date:2014-09-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Bioorthogonal Cleavage and Exchange of Major Histocompatibility Complex Ligands by Employing Azobenzene-Containing Peptides.
Angew.Chem.Int.Ed.Engl., 53, 2014

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