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PDB: 17965 results

3RXU
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Crystal structure of Trypsin complexed with benzamide (F05 and A06, cocktail experiment)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3RXO
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Crystal structure of Trypsin complexed with (3-pyrrol-1-ylphenyl)methanamine
Descriptor: 1-[3-(1H-pyrrol-1-yl)phenyl]methanamine, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3ZXP
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BU of 3zxp by Molmil
Structural and Functional Analyses of the Bro1 Domain Protein BROX
Descriptor: BRO1 DOMAIN-CONTAINING PROTEIN BROX
Authors:Zhai, Q, Landesman, M.B, Sundquist, W.I, Hill, C.P.
Deposit date:2011-08-13
Release date:2011-11-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Structure of the Bro1 Domain Protein Brox and Functional Analyses of the Alix Bro1 Domain in HIV-1 Budding.
Plos One, 6, 2011
3S0E
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Apis mellifera OBP14 in complex with the odorant eugenol (2-methoxy-4(2-propenyl)-phenol)
Descriptor: 2-methoxy-4-(prop-2-en-1-yl)phenol, OBP14
Authors:Spinelli, S, Lagarde, A, Iovinella, I, Tegoni, M, Pelosi, P, Cambillau, C.
Deposit date:2011-05-13
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Apis mellifera OBP14, a C-minus odorant-binding protein, and its complexes with odorant molecules.
Insect Biochem.Mol.Biol., 42, 2012
3ZZI
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Crystal structure of a tetrameric acetylglutamate kinase from Saccharomyces cerevisiae
Descriptor: ACETYLGLUTAMATE KINASE
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-09-01
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
3RXL
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Crystal structure of Trypsin complexed with (2,5-dimethyl-3-furyl)methanamine
Descriptor: 1-(2,5-dimethylfuran-3-yl)methanamine, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3RXI
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BU of 3rxi by Molmil
Crystal structure of Trypsin complexed with 2-(1H-indol-3-yl)ethanamine
Descriptor: 2-(1H-INDOL-3-YL)ETHANAMINE, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3SOP
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BU of 3sop by Molmil
Crystal Structure Of Human Septin 3 GTPase Domain
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Neuronal-specific septin-3
Authors:Marques, I.A, Macedo, J.N.A, Pereira, H.M, Valadares, N.F, Araujo, A.P.U, Garratt, R.C.
Deposit date:2011-06-30
Release date:2012-11-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.885 Å)
Cite:The structure and properties of septin 3: a possible missing link in septin filament formation.
Biochem.J., 450, 2013
3ZFL
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Crystal structure of the V58A mutant of human class alpha glutathione transferase in the apo form
Descriptor: GLUTATHIONE S-TRANSFERASE A1
Authors:Parbhoo, N, Fanucchi, S, Achilonu, I.A, Fernandes, M.A, Gildenhuys, S, Dirr, H.W.
Deposit date:2012-12-12
Release date:2012-12-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal Structure of the V58A Mutant of Human Class Alpha Glutathione Transferase in the Apo Form
To be Published
3SZ1
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Human PPAR gamma ligand binding domain in complex with luteolin and myristic acid
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one, MYRISTIC ACID, Peroxisome proliferator-activated receptor gamma, ...
Authors:Puhl, A.C, Bernardes, A, Polikarpov, I.
Deposit date:2011-07-18
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mode of peroxisome proliferator-activated receptor gamma activation by luteolin.
Mol.Pharmacol., 81, 2012
3ZG2
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BU of 3zg2 by Molmil
Sterol 14 alpha-demethylase (CYP51) from Trypanosoma cruzi in complex with the pyridine inhibitor (S)-2-(4-chlorophenyl)-2-(pyridin-3-yl)-1- (4-(4-(trifluoromethyl)phenyl)piperazin-1-yl)ethanone (EPL-BS1246,UDO)
Descriptor: (S)-2-(4-chlorophenyl)-2-pyridin-3-yl-1-[4-[4-(trifluoromethyl)phenyl]piperazin-1-yl]ethanone, PROTOPORPHYRIN IX CONTAINING FE, STEROL 14-ALPHA DEMETHYLASE
Authors:Hargrove, T.Y, Wawrzak, Z, Keenan, M, Chatelain, E, Lepesheva, G.I.
Deposit date:2012-12-14
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Complexes of Trypanosoma Cruzi Sterol 14Alpha-Demethylase (Cyp51) with Two Pyridine-Based Drug Candidates for Chagas Disease: Structural Basis for Pathogen-Selectivity
J.Biol.Chem., 288, 2013
3T3O
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Molecular basis for the recognition and cleavage of RNA (CUGG) by the bifunctional 5'-3' exo/endoribonuclease RNase J
Descriptor: GLYCEROL, Metal dependent hydrolase, O2'methyl-RNA, ...
Authors:Dorleans, A, Li de la Sierra-Gallay, I, Piton, J, Zig, L, Gilet, L, Putzer, H, Condon, C.
Deposit date:2011-07-25
Release date:2011-10-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Basis for the Recognition and Cleavage of RNA by the Bifunctional 5'-3' Exo/Endoribonuclease RNase J.
Structure, 19, 2011
4GHJ
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BU of 4ghj by Molmil
1.75 Angstrom Crystal Structure of Transcriptional Regulator ftom Vibrio vulnificus.
Descriptor: Probable transcriptional regulator
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Winsor, J, Grimshaw, S, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-07
Release date:2012-08-15
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:1.75 Angstrom Crystal Structure of Transcriptional Regulator ftom Vibrio vulnificus.
TO BE PUBLISHED
3T4P
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BU of 3t4p by Molmil
Crystal structure of O-Acetyl Serine Sulfhydrylase from Leishmania donovani in complex with designed tetrapeptide
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, O-acetyl serine sulfhydrylase, ...
Authors:Raj, I, Gourinath, S.
Deposit date:2011-07-26
Release date:2012-08-01
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The narrow active-site cleft of O-acetylserine sulfhydrylase from Leishmania donovani allows complex formation with serine acetyltransferases with a range of C-terminal sequences
Acta Crystallogr.,Sect.D, 68, 2012
3ZM6
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BU of 3zm6 by Molmil
CRYSTAL STRUCTURE OF MURF LIGASE IN COMPLEX WITH CYANOTHIOPHENE INHIBITOR
Descriptor: N-(6-(4-(2h-tetrazol-5-yl)benzyl)-3-cyano-4,5,6,7-tetrahydrothieno[2,3-c]pyridin-2-yl)-2,4-dichloro-5-(morpholinosulfonyl)benzamide, UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
Authors:Hrast, M, Turk, S, Sosic, I, Knez, D, Randall, C.P, Barreteau, H, Contreras-Martel, C, Dessen, A, ONeill, A.J, Mengin-Lecreulx, D, Blanot, D, Gobec, S.
Deposit date:2013-02-05
Release date:2013-07-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure-Activity Relationships of New Cyanothiophene Inhibitors of the Essential Peptidoglycan Biosynthesis Enzyme Murf.
Eur.J.Med.Chem., 66C, 2013
3ZMM
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BU of 3zmm by Molmil
Inhibitors of Jak2 Kinase domain
Descriptor: 5-FLUORO-4-[(1S)-1-(5-FLUOROPYRIMIDIN-2-YL)ETHOXY]-N-(5-METHYL-1H-PYRAZOL-3-YL)-6-MORPHOLINO-PYRIMIDIN-2-AMINE, ACETYL GROUP, TYROSINE-PROTEIN KINASE JAK2
Authors:Read, J, Green, I, Pollard, H, Howard, T, Mott, R.
Deposit date:2013-02-11
Release date:2013-04-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Discovery of Novel Jak2-Stat Pathway Inhibitors with Extended Residence Time on Target.
Bioorg.Med.Chem.Lett., 23, 2013
5UAD
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BU of 5uad by Molmil
MET Tyrosine Kinase Inhibition Enhances the Antitumor Efficacy of an HGF Antibody
Descriptor: CHLORIDE ION, Hepatocyte growth factor receptor, N-(6-{[6-(1-methyl-1H-pyrazol-4-yl)-1H-benzotriazol-1-yl]methyl}imidazo[1,2-b]pyridazin-2-yl)cyclopropanecarboxamide
Authors:Hoffman, I.D, Lawson, J.D.
Deposit date:2016-12-19
Release date:2017-05-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:MET Tyrosine Kinase Inhibition Enhances the Antitumor Efficacy of an HGF Antibody.
Mol. Cancer Ther., 16, 2017
3ZOQ
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BU of 3zoq by Molmil
Structure of BsUDG-p56 complex
Descriptor: CHLORIDE ION, GLYCEROL, P56, ...
Authors:Banos-Sanz, J.I, Mojardin, L, Sanz-Aparicio, J, Gonzalez, B, Salas, M.
Deposit date:2013-02-22
Release date:2013-05-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure and Functional Insights Into Uracil-DNA Glycosylase Inhibition by Phage Phi29 DNA Mimic Protein P56
Nucleic Acids Res., 41, 2013
3ZDL
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BU of 3zdl by Molmil
Vinculin head (1-258) in complex with a RIAM fragment
Descriptor: AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN, VINCULIN
Authors:Zacharchenko, T, Elliott, P.R, Goult, B.T, Bate, N, Critchely, D.R, Barsukov, I.L.
Deposit date:2012-11-28
Release date:2013-02-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Riam and Vinculin Binding to Talin are Mutually Exclusive and Regulate Adhesion Assembly and Turnover.
J.Biol.Chem., 288, 2013
3SRE
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BU of 3sre by Molmil
Serum paraoxonase-1 by directed evolution at pH 6.5
Descriptor: BROMIDE ION, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Ben David, M, Elias, M, Silman, I, Sussman, J.L, Tawfik, D.S.
Deposit date:2011-07-07
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Catalytic versatility and backups in enzyme active sites: the case of serum paraoxonase 1.
J.Mol.Biol., 418, 2012
3ZBO
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A new family of proteins related to the HEAT-like repeat DNA glycosylases with affinity for branched DNA structures
Descriptor: ALKF, CHLORIDE ION
Authors:Backe, P.H, Simm, R, Laerdahl, J.K, Dalhus, B, Fagerlund, A, Okstad, O.A, Rognes, T, Alseth, I, Kolsto, A.-B, Bjoras, M.
Deposit date:2012-11-12
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:A New Family of Proteins Related to the Heat-Like Repeat DNA Glycosylases with Affinity for Branched DNA Structures.
J.Struct.Biol., 183, 2013
3TEB
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BU of 3teb by Molmil
endonuclease/exonuclease/phosphatase family protein from Leptotrichia buccalis C-1013-b
Descriptor: Endonuclease/exonuclease/phosphatase, MAGNESIUM ION
Authors:Chang, C, Bigelow, L, Muniez, I, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-08-12
Release date:2011-08-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Crystal structure of endonuclease/exonuclease/phosphatase family protein from Leptotrichia buccalis C-1013-b
To be Published
4H3P
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BU of 4h3p by Molmil
Crystal structure of human ERK2 complexed with a MAPK docking peptide
Descriptor: Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ribosomal protein S6 kinase alpha-1
Authors:Gogl, G, Toeroe, I, Remenyi, A.
Deposit date:2012-09-14
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein-peptide complex crystallization: a case study on the ERK2 mitogen-activated protein kinase
Acta Crystallogr.,Sect.D, 69, 2013
4H6O
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Sterol 14-alpha demethylase (CYP51)from Trypanosoma cruzi in complex with the inhibitor NEU321 (1-(3-(4-chloro-3,5-dimethylphenoxy)benzyl)-1H-imidazole
Descriptor: 1-[3-(4-chloro-3,5-dimethylphenoxy)benzyl]-1H-imidazole, PROTOPORPHYRIN IX CONTAINING FE, Sterol 14-alpha demethylase
Authors:Wawrzak, Z, Hargrove, T.Y, Pollastri, M.P, Lepesheva, G.I.
Deposit date:2012-09-19
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Antitrypanosomal Lead Discovery: Identification of a Ligand-Efficient Inhibitor of Trypanosoma cruzi CYP51 and Parasite Growth.
J.Med.Chem., 56, 2013
3S4U
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BU of 3s4u by Molmil
Crystal structure of open, unliganded E. coli PhnD H157A
Descriptor: PhnD, subunit of alkylphosphonate ABC transporter
Authors:Alicea, I, Schreiter, E.R.
Deposit date:2011-05-20
Release date:2011-10-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the Escherichia coli Phosphonate Binding Protein PhnD and Rationally Optimized Phosphonate Biosensors.
J.Mol.Biol., 414, 2011

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