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PDB: 17801 results

6HTY
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PXR in complex with P2X4 inhibitor compound 25
Descriptor: (2~{R})-~{N}-[4-(3-chloranylphenoxy)-3-sulfamoyl-phenyl]-2-phenyl-propanamide, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Hillig, R.C, Puetter, V, Werner, S, Mesch, S, Laux-Biehlmann, A, Braeuer, N, Dahloef, H, Klint, J, ter Laak, A, Pook, E, Neagoe, I, Nubbemeyer, R, Schulz, S.
Deposit date:2018-10-05
Release date:2019-12-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Discovery and Characterization of the Potent and Selective P2X4 InhibitorN-[4-(3-Chlorophenoxy)-3-sulfamoylphenyl]-2-phenylacetamide (BAY-1797) and Structure-Guided Amelioration of Its CYP3A4 Induction Profile.
J.Med.Chem., 62, 2019
5M4X
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Mutant glyceraldehyde dehydrogenase (F34M+Y399C+S405N) from Thermoplasma acidophilum
Descriptor: D-glyceraldehyde dehydrogenase (NADP(+))
Authors:Iermak, I, Mesters, J.R, Kuta Smatanova, I.
Deposit date:2016-10-19
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.56 Å)
Cite:Mutant glyceraldehyde dehydrogenase (F34M+Y399C+S405N) from Thermoplasma acidophilum
To Be Published
8BWO
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Cryo-EM structure of nanodisc-reconstituted human MRP4 with E1202Q mutation (outward-facing occluded conformation)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family C member 4, MAGNESIUM ION
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8BJF
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Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (inward-facing conformation)
Descriptor: ATP-binding cassette sub-family C member 4, CHOLESTEROL, CHOLESTEROL HEMISUCCINATE
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-11-04
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
5V5S
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multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, Outer membrane protein TolC
Authors:wang, Z, fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-15
Release date:2017-04-19
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
8BWQ
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Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with topotecan)
Descriptor: (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE, ATP-binding cassette sub-family C member 4
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8BWP
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Cryo-EM structure of nanodisc-reconstituted wildtype human MRP4 (in complex with methotrexate)
Descriptor: ATP-binding cassette sub-family C member 4, METHOTREXATE
Authors:Raj, I, Bloch, M, Pape, T.H, Taylor, N.M.I.
Deposit date:2022-12-07
Release date:2023-08-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural and mechanistic basis of substrate transport by the multidrug transporter MRP4.
Structure, 31, 2023
8MSI
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TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 N14SQ44T
Descriptor: PROTEIN (ANTIFREEZE PROTEIN TYPE III)
Authors:Graether, S.P, Deluca, C.I, Baardsnes, J, Hill, G.A, Davies, P.L, Jia, Z.
Deposit date:1999-01-24
Release date:1999-04-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Quantitative and qualitative analysis of type III antifreeze protein structure and function.
J.Biol.Chem., 274, 1999
8OG3
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E. coli NfsB triple mutant T41L/N71S/F124T bound to citrate
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, FLAVIN MONONUCLEOTIDE, ...
Authors:Day, M.A, White, S.A, Hyde, E.I, Searle, P.F.
Deposit date:2023-03-17
Release date:2023-04-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure and Dynamics of Three Escherichia coli NfsB Nitro-Reductase Mutants Selected for Enhanced Activity with the Cancer Prodrug CB1954.
Int J Mol Sci, 24, 2023
8OIU
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Cryo-EM reconstruction of the native 24-mer E2o core of the 2-oxoglutarate dehydrogenase complex of C. thermophilum at 3.35 A resolution
Descriptor: Dihydrolipoyllysine-residue succinyltransferase
Authors:Skalidis, I, Tueting, C, Kyrilis, F.L, Hamdi, F, Kastritis, P.L.
Deposit date:2023-03-23
Release date:2023-05-31
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural analysis of an endogenous 4-megadalton succinyl-CoA-generating metabolon.
Commun Biol, 6, 2023
6XEU
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CryoEM structure of GIRK2PIP2* - G protein-gated inwardly rectifying potassium channel GIRK2 with PIP2
Descriptor: G protein-activated inward rectifier potassium channel 2, POTASSIUM ION, SODIUM ION, ...
Authors:Mathiharan, Y.K, Glaaser, I.W, Skiniotis, G, Slesinger, P.A.
Deposit date:2020-06-13
Release date:2021-09-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into GIRK2 channel modulation by cholesterol and PIP2
Cell Rep, 36, 2021
5S4A
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BU of 5s4a by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 Nsp3 macrodomain in complex with Z955123498
Descriptor: 4-AMINOPYRIDINE, DIMETHYL SULFOXIDE, Non-structural protein 3
Authors:Fearon, D, Schuller, M, Rangel, V.L, Douangamath, A, Rack, J.G.M, Zhu, K, Aimon, A, Brandao-Neto, J, Dias, A, Dunnet, L, Gorrie-Stone, T.J, Powell, A.J, Krojer, T, Skyner, R, Thompson, W, Ahel, I, von Delft, F.
Deposit date:2020-11-02
Release date:2021-01-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.081 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
7R5C
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BU of 7r5c by Molmil
Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-29 (G206C, R207S, D210L, S211V)
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Isoaspartyl peptidase, ...
Authors:Barciszewski, J, Imiolczyk, B, Loch, J.I, Jaskolski, M.
Deposit date:2022-02-10
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
7R1G
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BU of 7r1g by Molmil
Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-38 (R207C, D210S, S211V)
Descriptor: Beta-aspartyl-peptidase, Isoaspartyl peptidase, SODIUM ION
Authors:Loch, J.I, Kadziolka, K, Jaskolski, M.
Deposit date:2022-02-02
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
1S5I
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BU of 1s5i by Molmil
Fab (LNKB-2) of monoclonal antibody to Human Interleukin-2, crystal structure
Descriptor: Fab-fragment of monoclonal antibody
Authors:Pletnev, V.Z, Goryacheva, E.A, Tsygannik, I.N, Nesmeyanov, V.A, Pletnev, S.V, Pangborn, W, Duax, W.
Deposit date:2004-01-21
Release date:2004-05-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:[A new crystal form of the Fab fragment of a monoclonal antibody to human interleukin-2: the three-dimensional structure at 2.7 A resolution].
Bioorg. Khim., 30
5JEF
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BU of 5jef by Molmil
Fragment of nitrate/nitrite sensor histidine kinase NarQ (WT) in asymmetric holo state
Descriptor: EICOSANE, NITRATE ION, Nitrate/nitrite sensor protein NarQ
Authors:Gushchin, I, Melnikov, I, Polovinkin, V, Ishchenko, A, Popov, A, Gordeliy, V.
Deposit date:2016-04-18
Release date:2017-05-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Mechanism of transmembrane signaling by sensor histidine kinases.
Science, 356, 2017
1EZT
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BU of 1ezt by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF FREE RGS4 BY NMR
Descriptor: REGULATOR OF G-PROTEIN SIGNALING 4
Authors:Moy, F.J, Chanda, P.K, Cockett, M.I, Edris, W, Jones, P.G, Mason, K, Semus, S, Powers, R.
Deposit date:2000-05-11
Release date:2001-01-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of free RGS4 reveals an induced conformational change upon binding Galpha.
Biochemistry, 39, 2000
1EZY
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HIGH-RESOLUTION SOLUTION STRUCTURE OF FREE RGS4 BY NMR
Descriptor: REGULATOR OF G-PROTEIN SIGNALING 4
Authors:Moy, F.J, Chanda, P.K, Cockett, M.I, Edris, W, Jones, P.G, Mason, K, Semus, S, Powers, R.
Deposit date:2000-05-12
Release date:2001-01-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of free RGS4 reveals an induced conformational change upon binding Galpha.
Biochemistry, 39, 2000
6XUH
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Crystal structure of human phosphoglucose isomerase in complex with inhibitor
Descriptor: (2R,3R,4S)-5-((2-aminoethyl)amino)-2,3,4-trihydroxy-5-oxopentyl dihydrogen phosphate, 5-PHOSPHOARABINONIC ACID, Glucose-6-phosphate isomerase
Authors:Li de la Sierra-Gallay, I, Ahmad, L, Plancqueel, S, van Tilbeurgh, H, Salmon, L.
Deposit date:2020-01-20
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Novel N-substituted 5-phosphate-d-arabinonamide derivatives as strong inhibitors of phosphoglucose isomerases: Synthesis, structure-activity relationship and crystallographic studies.
Bioorg.Chem., 102, 2020
8BBO
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SARS-CoV-2 Delta-RBD complexed with BA.2-36 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IGH@ protein, Immunoglobulin kappa light chain, ...
Authors:Zhou, D, Ren, J, Stuart, D.I.
Deposit date:2022-10-14
Release date:2023-03-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Rapid escape of new SARS-CoV-2 Omicron variants from BA.2-directed antibody responses.
Cell Rep, 42, 2023
5VXR
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The antigen-binding fragment of MAb24 in complex with a peptide from Hepatitis C Virus E2 epitope I (412-423)
Descriptor: GLYCEROL, MAb24 Variable Heavy Chain,MAb24 Variable Heavy Chain, MAb24 Variable Light Chain,MAb24 Variable Light Chain, ...
Authors:Hardy, J.M, Gu, J, Boo, I, Drummer, H.E, Coulibaly, F.J.
Deposit date:2017-05-24
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Escape of Hepatitis C Virus from Epitope I Neutralization Increases Sensitivity of Other Neutralization Epitopes.
J. Virol., 92, 2018
6HZM
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Cryo-EM structure of the ABCG2 E211Q mutant bound to ATP and Magnesium (alternative placement of Magnesium into the cryo-EM density)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding cassette sub-family G member 2, MAGNESIUM ION
Authors:Manolaridis, I, Jackson, S.M, Taylor, N.M.I, Kowal, J, Stahlberg, H, Locher, K.P.
Deposit date:2018-10-23
Release date:2018-11-14
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Cryo-EM structures of a human ABCG2 mutant trapped in ATP-bound and substrate-bound states.
Nature, 563, 2018
7K4F
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Cryo-EM structure of human TRPV6 in complex with (4- phenylcyclohexyl)piperazine inhibitor 31
Descriptor: 5-[(4-{cis-4-[3-(trifluoromethyl)phenyl]cyclohexyl}piperazin-1-yl)methyl]pyridin-2(1H)-one, CALCIUM ION, Transient receptor potential cation channel subfamily V member 6
Authors:Neuberger, A, Nadezhdin, K.D, Singh, A.K, Sobolevsky, A.I.
Deposit date:2020-09-15
Release date:2020-12-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Inactivation-mimicking block of the epithelial calcium channel TRPV6.
Sci Adv, 6, 2020
5LKS
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Structure-function insights reveal the human ribosome as a cancer target for antibiotics
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Myasnikov, A.G, Natchiar, S.K, Nebout, M, Hazemann, I, Imbert, V, Khatter, H, Peyron, J.-F, Klaholz, B.P.
Deposit date:2016-07-23
Release date:2017-04-26
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure-function insights reveal the human ribosome as a cancer target for antibiotics.
Nat Commun, 7, 2016
6XY9
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Crystal structure of haloalkane dehalogenase DbeA-M1 loop variant from Bradyrhizobium elkanii
Descriptor: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase
Authors:Prudnikova, T, Rezacova, P, Kuta Smatanova, I, Chaloupkova, R, Damborsky, J.
Deposit date:2020-01-29
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family.
Comput Struct Biotechnol J, 18, 2020

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