Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17892 results

8VD2
DownloadVisualize
BU of 8vd2 by Molmil
Human TCR ET650-4 in complex with DQ8-InsC8-15-IAPP1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hybrid insulin peptide (HIP; InsC8-15-IAPP23-29 ), MHC class II HLA-DQ-alpha chain, ...
Authors:Tran, T.M, Lim, J.J, Loh, T.Y, Mannering, I.S, Rossjohn, J, Reid, H.H.
Deposit date:2023-12-14
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A structural basis of T cell cross-reactivity to native and spliced self-antigens presented by HLA-DQ8.
J.Biol.Chem., 300, 2024
8VCX
DownloadVisualize
BU of 8vcx by Molmil
Human TCR A2.13 in complex with DQ8-InsCpep
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Tran, T.M, Lim, J.J, Loh, T.J, Mannering, I.S, Rossjohn, J, Reid, H.H.
Deposit date:2023-12-14
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:A structural basis of T cell cross-reactivity to native and spliced self-antigens presented by HLA-DQ8.
J.Biol.Chem., 300, 2024
8VCY
DownloadVisualize
BU of 8vcy by Molmil
Human TCR A2.13 in complex with DQ8-InsC8-15NPY
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hybrid insulin peptide (HIP; InsC8-15-NPY68-74), ...
Authors:Tran, T.M, Lim, J.J, Loh, T.Y, Mannering, I.S, Rossjohn, J, Reid, H.H.
Deposit date:2023-12-14
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A structural basis of T cell cross-reactivity to native and spliced self-antigens presented by HLA-DQ8.
J.Biol.Chem., 300, 2024
8QQ5
DownloadVisualize
BU of 8qq5 by Molmil
Structure of WT SpNox DH domain: a bacterial NADPH oxidase.
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Oxidoreductase
Authors:Thepaut, M, Petit-Hartlein, I, Vermot, A, Humm, A.S, Dupeux, F, Marquez, J.A, Smith, S, Fieschi, F.
Deposit date:2023-10-03
Release date:2024-05-08
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structure and enzymatic study of a bacterial NADPH oxidase highlight the activation mechanism of eukaryotic NOX.
Elife, 13, 2024
8BRD
DownloadVisualize
BU of 8brd by Molmil
Mechanisms of ion selectivity and rotor coupling in the bacterial flagellar sodium-driven stator unit
Descriptor: Chemotaxis protein PomA, Flagellar motor protein,VaPomB, SODIUM ION
Authors:Hu, H, Taylor, N.M.I.
Deposit date:2022-11-23
Release date:2023-06-14
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Ion selectivity and rotor coupling of the Vibrio flagellar sodium-driven stator unit.
Nat Commun, 14, 2023
7UWH
DownloadVisualize
BU of 7uwh by Molmil
CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex bound to ribonucleotide substrate
Descriptor: DNA (59-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Hao, Z.T, Grower, M, Bharati, B, Proshkin, S, Epshtein, V, Svetlov, V, Nudler, E, Shamovsky, I.
Deposit date:2022-05-03
Release date:2023-05-31
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:RNA polymerase drives ribonucleotide excision DNA repair in E. coli.
Cell, 186, 2023
7UWE
DownloadVisualize
BU of 7uwe by Molmil
CryoEM Structure of E. coli Transcription-Coupled Ribonucleotide Excision Repair (TC-RER) complex
Descriptor: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Hao, Z.T, Grower, M, Bharati, B, Proshkin, S, Epshtein, V, Svetlov, V, Nudler, E, Shamovsky, I.
Deposit date:2022-05-03
Release date:2023-05-31
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:RNA polymerase drives ribonucleotide excision DNA repair in E. coli.
Cell, 186, 2023
6MLK
DownloadVisualize
BU of 6mlk by Molmil
Structure of Thioesterase from DEBS with a thioesterase-specific antibody
Descriptor: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6, CHLORIDE ION, ...
Authors:Mathews, I.I, Li, X, Khosla, C.
Deposit date:2018-09-27
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Discovery and Characterization of a Thioesterase-Specific Monoclonal Antibody That Recognizes the 6-Deoxyerythronolide B Synthase.
Biochemistry, 57, 2018
6BX8
DownloadVisualize
BU of 6bx8 by Molmil
Human Mesotrypsin (PRSS3) Complexed with Tissue Factor Pathway Inhibitor Variant (TFPI1-KD1-K15R-I17C-I34C)
Descriptor: SULFATE ION, Tissue factor pathway inhibitor, Trypsin-3
Authors:Coban, M, Sankaran, B, Cohen, I, Hockla, A, Papo, N, Radisky, E.S.
Deposit date:2017-12-18
Release date:2019-02-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Disulfide engineering of human Kunitz-type serine protease inhibitors enhances proteolytic stability and target affinity toward mesotrypsin.
J. Biol. Chem., 294, 2019
1LLN
DownloadVisualize
BU of 1lln by Molmil
1.6A CRYSTAL STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN-III (PAP-III) WITH METHYLATED LYSINES
Descriptor: Antiviral Protein 3
Authors:Kurinov, I.V, Uckun, F.M.
Deposit date:2002-04-29
Release date:2003-06-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High resolution X-ray structure of potent anti-HIV pokeweed antiviral protein-III
Biochem.Pharm., 65, 2003
8BD6
DownloadVisualize
BU of 8bd6 by Molmil
Cas12k-sgRNA-dsDNA-TnsC non-productive complex.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cas12k, DNA, ...
Authors:Schmitz, M, Querques, I, Oberli, S, Chanez, C, Jinek, M.
Deposit date:2022-10-18
Release date:2022-12-28
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis for the assembly of the type V CRISPR-associated transposon complex.
Cell, 185, 2022
8QH0
DownloadVisualize
BU of 8qh0 by Molmil
Crystal structure of the SARS-CoV-2 RBD with the antibody Cv2.3194
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cv2.3194 Heavy chain, GLYCEROL, ...
Authors:Fernandez, I, Rey, F.A.
Deposit date:2023-09-06
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:A broadly neutralizing antibody against SARS-CoV-2 Omicron variants
To Be Published
8QWM
DownloadVisualize
BU of 8qwm by Molmil
Structure of p53 cancer mutant Y205C
Descriptor: 1,2-ETHANEDIOL, Cellular tumor antigen p53, L(+)-TARTARIC ACID, ...
Authors:Balourdas, D.I, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
Deposit date:2023-10-19
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural basis of p53 inactivation by cavity-creating cancer mutations and its implications for the development of mutant p53 reactivators.
Cell Death Dis, 15, 2024
8QYI
DownloadVisualize
BU of 8qyi by Molmil
OleP in complex with lithocholic acid in high salt crystallization conditions
Descriptor: (3beta,5beta,14beta,17alpha)-3-hydroxycholan-24-oic acid, Cytochrome P-450, FORMIC ACID, ...
Authors:Fata, F, Costanzo, A, Freda, I, Gugole, E, Bulfaro, G, Barbizzi, L, Di Renzo, M, Savino, C, Vallone, B, Montemiglio, L.C.
Deposit date:2023-10-26
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:OleP in complex with lithocolic acid in high salt crystallization conditions
To Be Published
1LQL
DownloadVisualize
BU of 1lql by Molmil
Crystal structure of OsmC like protein from Mycoplasma pneumoniae
Descriptor: osmotical inducible protein C like family
Authors:Choi, I.-G, Shin, D.H, Brandsen, J, Jancarik, J, Kim, R, Yokota, H, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-05-10
Release date:2003-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution
J.STRUCT.FUNCT.GENOM., 4, 2003
8W69
DownloadVisualize
BU of 8w69 by Molmil
DegQ-b-casein complex
Descriptor: Casein fragment, peptidase Do
Authors:Lee, I.-G, Jeon, H.
Deposit date:2023-08-28
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of E. coli Deg-b-casein complex
To Be Published
3FXT
DownloadVisualize
BU of 3fxt by Molmil
Crystal structure of the N-terminal domain of human NUDT6
Descriptor: GLYCEROL, Nucleoside diphosphate-linked moiety X motif 6
Authors:Tresaugues, L, Welin, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nyman, T, Persson, C, Sagemark, J, Schueler, H, Siponen, M.I, Thorsell, A.G, Van Den Berg, S, Weigelt, J, Wikstrom, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2009-01-21
Release date:2009-03-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the N-terminal domain of human NUDT6
To be Published
3G1U
DownloadVisualize
BU of 3g1u by Molmil
Crystal structure of Leishmania major S-adenosylhomocysteine hydrolase
Descriptor: ADENOSINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Siponen, M.I, Welin, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Schutz, P, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Wisniewska, M, Schueler, H, Structural Genomics Consortium (SGC)
Deposit date:2009-01-30
Release date:2009-02-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Leishmania major S-adenosylhomocysteine hydrolase
To be Published
1SJM
DownloadVisualize
BU of 1sjm by Molmil
Nitrite bound copper containing nitrite reductase
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (II) ION, ...
Authors:Tocheva, E.I, Rosell, F.I, Mauk, A.G, Murphy, M.E.P.
Deposit date:2004-03-03
Release date:2004-06-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Side-on copper-nitrosyl coordination by nitrite reductase.
Science, 304, 2004
6APK
DownloadVisualize
BU of 6apk by Molmil
Trans-acting transferase from Disorazole synthase solved by serial femtosecond XFEL crystallography
Descriptor: DisD protein
Authors:Lyubimov, A.Y, Mathews, I.I, Uervivojnangkoorn, M, Khosla, C, Soltis, S.M, Cohen, A.E.
Deposit date:2017-08-17
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Conformational Flexibility of the Acyltransferase from the Disorazole Polyketide Synthase Is Revealed by an X-ray Free-Electron Laser Using a Room-Temperature Sample Delivery Method for Serial Crystallography.
Biochemistry, 56, 2017
8VMF
DownloadVisualize
BU of 8vmf by Molmil
Crystal structure of a transition-state mimic of the GSK-3/Axin complex bound to a beta-catenin S45D peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Axin-1, ...
Authors:Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
Deposit date:2024-01-13
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional effects of phosphopriming and scaffolding in the kinase GSK3beta
Sci.Signal., 2024
2XH1
DownloadVisualize
BU of 2xh1 by Molmil
Crystal structure of human KAT II-inhibitor complex
Descriptor: (3S)-10-(4-AMINOPIPERAZIN-1-YL)-9-FLUORO-7-HYDROXY-3-METHYL-2,3-DIHYDRO-8H-[1,4]OXAZINO[2,3,4-IJ]QUINOLINE-6-CARBOXYLATE, GLYCEROL, IODIDE ION, ...
Authors:Rossi, F, Casazza, V, Garavaglia, S, Sathyasaikumar, K.V, Schwarcz, R, Kojima, S.I, Okuwaki, K, Ono, S.I, Kajii, Y, Rizzi, M.
Deposit date:2010-06-08
Release date:2010-07-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure-Based Selective Targeting of the Pyridoxal 5'-Phsosphate Dependent Enzyme Kynurenine Aminotransferase II for Cognitive Enhancement
J.Med.Chem., 53, 2010
8VME
DownloadVisualize
BU of 8vme by Molmil
Crystal structure of the GSK-3/Axin complex bound to a phosphorylated beta-catenin T41A peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Axin-1, Catenin beta-1, ...
Authors:Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
Deposit date:2024-01-13
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional effects of phosphopriming and scaffolding in the kinase GSK3beta
Sci.Signal., 2024
5G1E
DownloadVisualize
BU of 5g1e by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
Descriptor: SYNTENIN-1
Authors:Lee, I, Kim, H, Yun, J.H, Lee, W.
Deposit date:2016-03-25
Release date:2016-11-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016
8VMG
DownloadVisualize
BU of 8vmg by Molmil
Crystal structure of GSK-3 26-383 bound to Axin 383-435
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Enos, M.D, Gavagan, M, Jameson, N, Zalatan, J.G, Weis, W.I.
Deposit date:2024-01-13
Release date:2024-08-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural and functional effects of phosphopriming and scaffolding in the kinase GSK3beta
Sci.Signal., 2024

224931

数据于2024-09-11公开中

PDB statisticsPDBj update infoContact PDBjnumon