Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17822 件

5TG3
DownloadVisualize
BU of 5tg3 by Molmil
Crystal Structure of Dioclea reflexa seed lectin (DrfL) in complex with X-Man
分子名称: 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, Dioclea reflexa lectin, ...
著者Santiago, M.Q, Correia, J.L.A, Pinto-Junior, V.R, Osterne, V.J.S, Pereira, R.I, Silva-Filho, J.C, Lossio, C.F, Rocha, B.A.M, Delatorre, P, Neco, A.H.B, Araripe, D.A, Nascimento, K.S, Cavada, B.S.
登録日2016-09-27
公開日2017-02-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.765 Å)
主引用文献Structural studies of a vasorelaxant lectin from Dioclea reflexa Hook seeds: Crystal structure, molecular docking and dynamics.
Int. J. Biol. Macromol., 98, 2017
4LJ5
DownloadVisualize
BU of 4lj5 by Molmil
ClpB NBD2 from T. thermophilus in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB
著者Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
登録日2013-07-04
公開日2014-02-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
4KZ3
DownloadVisualize
BU of 4kz3 by Molmil
Crystal structure of AmpC beta-lactamase in complex with fragment 44 (5-chloro-3-sulfamoylthiophene-2-carboxylic acid)
分子名称: 5-chloro-3-sulfamoylthiophene-2-carboxylic acid, Beta-lactamase, PHOSPHATE ION
著者Eidam, O, Barelier, S, Fish, I, Shoichet, B.K.
登録日2013-05-29
公開日2014-05-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Increasing chemical space coverage by combining empirical and computational fragment screens.
Acs Chem.Biol., 9, 2014
4L13
DownloadVisualize
BU of 4l13 by Molmil
Crystal structure of Ligand Free EGFP-based Calcium Sensor CatchER
分子名称: ACETIC ACID, EGFP-based Calcium Sensor CatchER
著者Zhang, Y, Weber, I.T.
登録日2013-06-01
公開日2013-12-11
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
4L4S
DownloadVisualize
BU of 4l4s by Molmil
Structural characterisation of the NADH binary complex of human lactate dehydrogenase M isozyme
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-lactate dehydrogenase A chain
著者Dempster, S, Harper, S, Moses, J.E, Dreveny, I.
登録日2013-06-09
公開日2014-04-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural characterization of the apo form and NADH binary complex of human lactate dehydrogenase.
Acta Crystallogr.,Sect.D, 70, 2014
4L55
DownloadVisualize
BU of 4l55 by Molmil
X-ray structure of the adduct between bovine pancreatic ribonuclease and AziRu
分子名称: RUTHENIUM ION, Ribonuclease pancreatic
著者Vergara, A, Russo Krauss, I, Merlino, A.
登録日2013-06-10
公開日2014-01-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Investigating the ruthenium metalation of proteins: X-ray structure and Raman microspectroscopy of the complex between RNase A and AziRu.
Inorg.Chem., 52, 2013
4LD1
DownloadVisualize
BU of 4ld1 by Molmil
Structural analysis of the microcephaly protein CPAP G-box domain suggests a role in centriole elongation.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, NITRATE ION, TETRAETHYLENE GLYCOL, ...
著者Hatzopoulos, G.N, Vakonakis, I.
登録日2013-06-24
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural analysis of the G-box domain of the microcephaly protein CPAP suggests a role in centriole architecture.
Structure, 21, 2013
5TMB
DownloadVisualize
BU of 5tmb by Molmil
Crystal structure of Os79 from O. sativa in complex with UDP.
分子名称: Glycosyltransferase, Os79, URIDINE-5'-DIPHOSPHATE
著者Wetterhorn, K.M, Newmister, S.A, Caniza, R.K, Busman, M, McCormick, S.P, Berthiller, F, Adam, G, Rayment, I.
登録日2016-10-12
公開日2016-11-02
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Crystal Structure of Os79 (Os04g0206600) from Oryza sativa: A UDP-glucosyltransferase Involved in the Detoxification of Deoxynivalenol.
Biochemistry, 55, 2016
4EGD
DownloadVisualize
BU of 4egd by Molmil
1.85 Angstrom crystal structure of native hypothetical protein SAOUHSC_02783 from Staphylococcus aureus
分子名称: CALCIUM ION, CHLORIDE ION, Uncharacterized protein SAOUHSC_02783
著者Biancucci, M, Minasov, G, Halavaty, A, Filippova, E.V, Shuvalova, L, Dubrovska, I, Winsor, J, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2012-03-30
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献1.85 Angstrom crystal structure of native hypothetical protein SAOUHSC_02783 from Staphylococcus aureus
TO BE PUBLISHED
5T2E
DownloadVisualize
BU of 5t2e by Molmil
Crystal Structure of multi-drug resistant HIV-1 protease PR-S17
分子名称: CHLORIDE ION, Protease
著者Agniswamy, J, Weber, I.T.
登録日2016-08-23
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Studies of a Rationally Selected Multi-Drug Resistant HIV-1 Protease Reveal Synergistic Effect of Distal Mutations on Flap Dynamics.
PLoS ONE, 11, 2016
3SWL
DownloadVisualize
BU of 3swl by Molmil
Crystal Structure Analysis of H74A Mutant of Human CLIC1
分子名称: Chloride intracellular channel protein 1
著者Fanucchi, S, Achilonu, I.A, Fernandes, M.A, Dirr, H.W.
登録日2011-07-14
公開日2011-08-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Role of individual histidines in the pH-dependent global stability of human chloride intracellular channel 1.
Biochemistry, 51, 2012
5SYD
DownloadVisualize
BU of 5syd by Molmil
Circularly permutated azurin (cpAz) based on P. aeruginosa azurin sequence
分子名称: Azurin, chimeric construct, COPPER (II) ION
著者Petrik, I, Yang, Y, Howard, R, Yi, L.
登録日2016-08-10
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Circular Permutation of Azurin Results in the same Type 1 Blue Copper with different Reduction Potentials
To Be Published
4EWD
DownloadVisualize
BU of 4ewd by Molmil
Study on structure and function relationships in human Pirin with Mn ion
分子名称: MANGANESE (II) ION, Pirin
著者Liu, F, Rehmani, I, Chen, L, Fu, R, Serrano, V, Wilson, D.W, Liu, A.
登録日2012-04-26
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
5T04
DownloadVisualize
BU of 5t04 by Molmil
STRUCTURE OF CONSTITUTIVELY ACTIVE NEUROTENSIN RECEPTOR
分子名称: 3,3',3''-phosphanetriyltripropanoic acid, ARG-ARG-PRO-TYR-ILE-LEU, DI(HYDROXYETHYL)ETHER, ...
著者Krumm, B, Botos, I, Grisshammer, R.
登録日2016-08-15
公開日2016-12-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure and dynamics of a constitutively active neurotensin receptor.
Sci Rep, 6, 2016
5T38
DownloadVisualize
BU of 5t38 by Molmil
Crystal Structure of the N-terminal domain of EvdMO1 with SAH bound
分子名称: EvdMO1, S-ADENOSYL-L-HOMOCYSTEINE
著者McCulloch, K.M, Berndt, S, Yamakawa, I, Chen, Q, Loukachevitch, L.V, Starbird, C, Perry, N.A, Iverson, T.M.
登録日2016-08-25
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.1502 Å)
主引用文献The Structure of the Bifunctional Everninomicin Biosynthetic Enzyme EvdMO1 Suggests Independent Activity of the Fused Methyltransferase-Oxidase Domains.
Biochemistry, 57, 2018
3SO9
DownloadVisualize
BU of 3so9 by Molmil
Darunavir in Complex with a Human Immunodeficiency Virus Type 1 Protease Variant
分子名称: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, HIV-1 protease
著者Wang, Y, Liu, Z, Brunzelle, S.J, Kovari, L.C, Kovari, I.A.
登録日2011-06-30
公開日2011-10-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献The higher barrier of darunavir and tipranavir resistance for HIV-1 protease.
Biochem.Biophys.Res.Commun., 412, 2011
5TX7
DownloadVisualize
BU of 5tx7 by Molmil
Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Desulfovibrio vulgaris
分子名称: D-isomer specific 2-hydroxyacid dehydrogenase family protein, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL
著者Czub, M.P, Shabalin, I.G, Gasiorowska, O.A, Handing, K.B, Kutner, J, Cymborowski, M.T, Hennig, P.M, Bonanno, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-11-15
公開日2016-12-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Desulfovibrio vulgaris
to be published
4EI7
DownloadVisualize
BU of 4ei7 by Molmil
Crystal structure of Bacillus cereus TubZ, GDP-form
分子名称: GUANOSINE-5'-DIPHOSPHATE, Plasmid replication protein RepX
著者Hayashi, I, Hoshino, S.
登録日2012-04-05
公開日2012-08-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Filament formation of the FtsZ/tubulin-like protein TubZ from the Bacillus cereus pXO1 plasmid.
J.Biol.Chem., 287, 2012
5TZL
DownloadVisualize
BU of 5tzl by Molmil
Structure of transthyretin in complex with the kinetic stabilizer 201
分子名称: 4-(7-chloro-1,3-benzoxazol-2-yl)-2,6-diiodophenol, Transthyretin
著者Connelly, S, Mortenson, D.E, Choi, S, Wilson, I.A, Powers, E.T, Kelly, J.W, Johnson, S.M.
登録日2016-11-21
公開日2017-06-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Semi-quantitative models for identifying potent and selective transthyretin amyloidogenesis inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
4N1S
DownloadVisualize
BU of 4n1s by Molmil
Structure of Cyclophilin A in complex with benzohydrazide.
分子名称: Peptidyl-prolyl cis-trans isomerase A, benzohydrazide
著者Mcnae, I.W, Dornan, J, Walkinshaw, M.D.
登録日2013-10-04
公開日2015-08-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Mapping the binding surface of Cyclophilin A.
To be Published
5U65
DownloadVisualize
BU of 5u65 by Molmil
Camel Nanobody VHH-5
分子名称: SULFATE ION, VHH-5
著者Stanfield, R.L, Wilson, I.A.
登録日2016-12-07
公開日2017-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Selection of nanobodies with broad neutralizing potential against primary HIV-1 strains using soluble subtype C gp140 envelope trimers.
Sci Rep, 7, 2017
4MUB
DownloadVisualize
BU of 4mub by Molmil
Schistosoma mansoni (Blood Fluke) Sulfotransferase/Oxamniquine Complex
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase, {(2S)-7-nitro-2-[(propan-2-ylamino)methyl]-1,2,3,4-tetrahydroquinolin-6-yl}methanol
著者Valentim, C.L.L, Cioli, D, Chevalier, F.D, Cao, X, Taylor, A.B, Holloway, S.P, Pica-Mattoccia, L, Guidi, A, Basso, A, Tsai, I.J, Berriman, M, Carvalho-Queiroz, C, Almeida, M, Aguilar, H, Frantz, D.E, Hart, P.J, Anderson, T.J.C, LoVerde, P.T.
登録日2013-09-21
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Genetic and molecular basis of drug resistance and species-specific drug action in schistosome parasites.
Science, 342, 2013
5U4Q
DownloadVisualize
BU of 5u4q by Molmil
1.5 Angstrom Resolution Crystal Structure of NAD-Dependent Epimerase from Klebsiella pneumoniae in Complex with NAD.
分子名称: CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, dTDP-glucose 4,6-dehydratase
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Bishop, B, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-12-05
公開日2016-12-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献1.5 Angstrom Resolution Crystal Structure of NAD-Dependent Epimerase from Klebsiella pneumoniae in Complex with NAD.
To Be Published
4BV5
DownloadVisualize
BU of 4bv5 by Molmil
Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.
分子名称: 4-(aminomethyl)-N-(benzenesulfonyl)cyclohexanecarboxamide, APOLIPOPROTEIN(A)
著者Sandmark, J, Althage, M, Andersson, G.M.K, Antonsson, T, Blaho, S, Bodin, C, Bostrom, J, Chen, Y, Dahlen, A, Eriksson, P.O, Evertsson, E, Fex, T, Fjellstrom, O, Gustafsson, D, Hallberg, C, Hicks, R, Jarkvist, E, Johansson, C, Kalies, I, Kang, D, Svalstedt Karlsson, B, Kartberg, F, Legnehed, A, Lindqvist, A.M, Martinsson, S.A, Moberg, A, Petersson, A.U, Ridderstrom, M, Thelin, A, Tigerstrom, A, Vinblad, J, Xu, B, Knecht, W.
登録日2013-06-25
公開日2014-07-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A)
To be Published
4C12
DownloadVisualize
BU of 4c12 by Molmil
X-ray Crystal Structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
著者Fulop, V, Roper, D.I, Ruane, K.M, Barreteau, H, Boniface, A, Dementin, S, Blanot, D, Mengin-Lecreulx, D, Gobec, S, Dessen, A, Dowson, C.G, Lloyd, A.J.
登録日2013-08-09
公開日2013-10-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Specificity Determinants for Lysine Incorporation in Staphylococcus Aureus Peptidoglycan as Revealed by the Structure of a Mure Enzyme Ternary Complex.
J.Biol.Chem., 288, 2013

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon