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PDB: 17822 件

2MTZ
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Haddock model of Bacillus subtilis L,D-transpeptidase in complex with a peptidoglycan hexamuropeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid, Putative L,D-transpeptidase YkuD, intact bacterial peptidoglycan
著者Schanda, P, Triboulet, S, Laguri, C, Bougault, C, Ayala, I, Callon, M, Arthur, M, Simorre, J.
登録日2014-09-02
公開日2015-01-14
最終更新日2023-11-15
実験手法SOLID-STATE NMR
主引用文献Atomic model of a cell-wall cross-linking enzyme in complex with an intact bacterial peptidoglycan.
J.Am.Chem.Soc., 136, 2014
3QQB
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BU of 3qqb by Molmil
Crystal structure of HA2 R106H mutant of H2 hemagglutinin, neutral pH form
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Xu, R, Wilson, I.A.
登録日2011-02-15
公開日2011-03-09
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin.
J.Virol., 85, 2011
5F6F
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BU of 5f6f by Molmil
S. aureus MepR G34R Mutant
分子名称: MarR family regulatory protein
著者Newman, C.E, Birukou, I, Brennan, R.G.
登録日2015-12-05
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献S. aureus MepR G34R Mutant
To Be Published
1TF0
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BU of 1tf0 by Molmil
Crystal structure of the GA module complexed with human serum albumin
分子名称: CITRIC ACID, DECANOIC ACID, Peptostreptococcal albumin-binding protein, ...
著者Lejon, S, Svensson, S, Bjorck, L, Frick, I.-M, Wikstrom, M.
登録日2004-05-26
公開日2004-09-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure and biological implications of a bacterial albumin binding module in complex with human serum albumin
J.Biol.Chem., 279, 2004
1TFH
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BU of 1tfh by Molmil
EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR
分子名称: HUMAN TISSUE FACTOR
著者Huang, M, Syed, R, Stura, E.A, Stone, M.J, Stefanko, R.S, Ruf, W, Edgington, T.S, Wilson, I.A.
登録日1997-04-10
公開日1998-02-25
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The mechanism of an inhibitory antibody on TF-initiated blood coagulation revealed by the crystal structures of human tissue factor, Fab 5G9 and TF.G9 complex.
J.Mol.Biol., 275, 1998
3S2K
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BU of 3s2k by Molmil
Structural basis of Wnt signaling inhibition by Dickkopf binding to LRP5/6.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ahn, V.E, Chu, M.L.-H, Choi, H.-J, Tran, D, Abo, A, Weis, W.I.
登録日2011-05-16
公開日2011-11-02
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of Wnt Signaling Inhibition by Dickkopf Binding to LRP5/6.
Dev.Cell, 21, 2011
3S3J
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Transglutaminase 2 in complex with a novel inhibitor
分子名称: GLYCEROL, Peptide inhibitor, Protein-glutamine gamma-glutamyltransferase 2, ...
著者Lindemann, I, Heine, A, Klebe, G.
登録日2011-05-18
公開日2012-06-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Inhibitors of Transglutaminase 2: A therapeutic option in celiac disease
To be Published
1TKW
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BU of 1tkw by Molmil
The transient complex of poplar plastocyanin with turnip cytochrome f determined with paramagnetic NMR
分子名称: COPPER (II) ION, Cytochrome f, HEME C, ...
著者Lange, C, Cornvik, T, Diaz-Moreno, I, Ubbink, M.
登録日2004-06-09
公開日2005-05-24
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献The transient complex of poplar plastocyanin with cytochrome f: effects of ionic strength and pH
Biochim.Biophys.Acta, 1707, 2005
3VSE
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BU of 3vse by Molmil
Crystal structure of methyltransferase
分子名称: Putative uncharacterized protein, S-ADENOSYL-L-HOMOCYSTEINE
著者Kita, S, Tanaka, Y, Yao, M, Tanaka, I.
登録日2012-04-25
公開日2013-04-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Crystal structure of a putative methyltransferase SAV1081 from Staphylococcus aureus
Protein Pept.Lett., 20, 2012
6ERO
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BU of 6ero by Molmil
Structure of human TFB2M
分子名称: CHLORIDE ION, Dimethyladenosine transferase 2, mitochondrial,Dimethyladenosine transferase 2, ...
著者Hillen, H.S, Morozov, Y.I, Sarfallah, A, Temiakov, D, Cramer, P.
登録日2017-10-18
公開日2017-11-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis of Mitochondrial Transcription Initiation.
Cell, 171, 2017
1TF3
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BU of 1tf3 by Molmil
TFIIIA FINGER 1-3 BOUND TO DNA, NMR, 22 STRUCTURES
分子名称: 5S RNA GENE, TRANSCRIPTION FACTOR IIIA, ZINC ION
著者Foster, M.P, Wuttke, D.S, Radhakrishnan, I, Case, D.A, Gottesfeld, J.M, Wright, P.E.
登録日1997-07-01
公開日1997-09-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Domain packing and dynamics in the DNA complex of the N-terminal zinc fingers of TFIIIA.
Nat.Struct.Biol., 4, 1997
1TBA
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BU of 1tba by Molmil
SOLUTION STRUCTURE OF A TBP-TAFII230 COMPLEX: PROTEIN MIMICRY OF THE MINOR GROOVE SURFACE OF THE TATA BOX UNWOUND BY TBP, NMR, 25 STRUCTURES
分子名称: TRANSCRIPTION INITIATION FACTOR IID 230K CHAIN, TRANSCRIPTION INITIATION FACTOR TFIID
著者Liu, D, Ishima, R, Tong, K.I, Bagby, S, Kokubo, T, Muhandiram, D.R, Kay, L.E, Nakatani, Y, Ikura, M.
登録日1998-08-16
公開日1999-08-16
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a TBP-TAF(II)230 complex: protein mimicry of the minor groove surface of the TATA box unwound by TBP.
Cell(Cambridge,Mass.), 94, 1998
3VH9
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BU of 3vh9 by Molmil
Crystal structure of Aeromonas proteolytica aminopeptidase complexed with 8-quinolinol
分子名称: Bacterial leucyl aminopeptidase, CHLORIDE ION, GLYCEROL, ...
著者Saijo, S, Hanaya, K, Suetsugu, M, Kobayashi, K, Yamato, I, Aoki, S.
登録日2011-08-24
公開日2012-05-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Potent inhibition of dinuclear zinc(II) peptidase, an aminopeptidase from Aeromonas proteolytica, by 8-quinolinol derivatives: inhibitor design based on Zn(2+) fluorophores, kinetic, and X-ray crystallographic study.
J.Biol.Inorg.Chem., 17, 2012
1TAM
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BU of 1tam by Molmil
HUMAN IMMUNODEFICIENCY VIRUS, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: HIV-1 MATRIX PROTEIN
著者Matthews, S, Barlow, P, Clark, N, Kingsman, S, Kingsman, A, Campbell, I.
登録日1996-02-07
公開日1996-07-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Refined solution structure of p17, the HIV matrix protein.
Biochem.Soc.Trans., 23, 1995
3VW7
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BU of 3vw7 by Molmil
Crystal structure of human protease-activated receptor 1 (PAR1) bound with antagonist vorapaxar at 2.2 angstrom
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, Proteinase-activated receptor 1, ...
著者Zhang, C, Srinivasan, Y, Arlow, D.H, Fung, J.J, Palmer, D, Zheng, Y, Green, H.F, Pandey, A, Dror, R.O, Shaw, D.E, Weis, W.I, Coughlin, S.R, Kobilka, B.K.
登録日2012-08-07
公開日2012-12-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献High-resolution crystal structure of human protease-activated receptor 1
Nature, 492, 2012
3VJM
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Crystal structure of human depiptidyl peptidase IV (DPP-4) in complex with a prolylthiazolidine inhibitor #1
分子名称: 1,3-thiazolidin-3-yl[(2S,4S)-4-{4-[2-(trifluoromethyl)quinolin-4-yl]piperazin-1-yl}pyrrolidin-2-yl]methanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Akahoshi, F, Kishida, H, Miyaguchi, I, Yoshida, T, Ishii, S.
登録日2011-10-24
公開日2012-08-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fused bicyclic heteroarylpiperazine-substituted l-prolylthiazolidines as highly potent DPP-4 inhibitors lacking the electrophilic nitrile group
Bioorg.Med.Chem., 20, 2012
2MRF
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BU of 2mrf by Molmil
NMR structure of the ubiquitin-binding zinc finger (UBZ) domain from human Rad18
分子名称: E3 ubiquitin-protein ligase RAD18, ZINC ION
著者Rizzo, A.A, Salerno, P.E, Bezsonova, I, Korzhnev, D.M.
登録日2014-07-03
公開日2014-10-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR Structure of the Human Rad18 Zinc Finger in Complex with Ubiquitin Defines a Class of UBZ Domains in Proteins Linked to the DNA Damage Response.
Biochemistry, 53, 2014
2MOT
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BU of 2mot by Molmil
Backbone Structure of Actin Depolymerizing Factor (ADF) of Toxoplasma gondii Based on Prot3DNMR Approach
分子名称: Actin depolymerizing factor ADF
著者Kumar, D, Raikwal, N, Raval, I, Jaiswal, N, Shukla, V, Arora, A.
登録日2014-05-05
公開日2015-05-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Prot3DNMR: A Simple and Swift Strategy for Backbone Structure Determination of Proteins by NMR
To be Published
2MZA
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BU of 2mza by Molmil
Phosphorylation of CB1 Cannabinoid Receptor Fourth Intracellular Loop pepducins: Effects on Structure and Function
分子名称: Cannabinoid receptor 1
著者Ganjiwale, A, Eldeeb, K, Chandrashekaran, I, Howlett, A, Cowsik, S.
登録日2015-02-08
公開日2016-02-17
実験手法SOLUTION NMR
主引用文献Phosphorylation of CB1Cannabinoid Receptor Fourth Intracellular Loop Pepducins: Effects on Structure and Function
To be Published
3RXA
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BU of 3rxa by Molmil
Crystal structure of Trypsin complexed with cycloheptanamine
分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
著者Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
2MPN
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BU of 2mpn by Molmil
3D NMR structure of the transmembrane domain of the full-length inner membrane protein YgaP from Escherichia coli
分子名称: Inner membrane protein YgaP
著者Eichmann, C, Tzitzilonis, C, Bordignon, E, Maslennikov, I, Choe, S, Riek, R.
登録日2014-05-29
公開日2014-06-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR Structure and Functional Analysis of the Integral Membrane Protein YgaP from Escherichia coli.
J.Biol.Chem., 289, 2014
3RXK
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BU of 3rxk by Molmil
Crystal structure of Trypsin complexed with methyl 4-amino-1-methyl-pyrrolidine-2-carboxylate
分子名称: CALCIUM ION, Cationic trypsin, DIMETHYL SULFOXIDE, ...
著者Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
1SWC
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BU of 1swc by Molmil
APO-CORE-STREPTAVIDIN AT PH 4.5
分子名称: STREPTAVIDIN
著者Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E.
登録日1997-03-04
公開日1998-03-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
1SWB
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APO-CORE-STREPTAVIDIN AT PH 7.5
分子名称: STREPTAVIDIN
著者Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E.
登録日1997-03-04
公開日1998-03-04
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural studies of the streptavidin binding loop.
Protein Sci., 6, 1997
6EIO
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BU of 6eio by Molmil
Crystal structure of an ice binding protein from an Antarctic Biological Consortium
分子名称: Antifreeze protein, GLYCEROL, SULFATE ION
著者Nardini, M, Mangiagalli, M, Nardone, V, Bar Dolev, M, Vena, V.F, Sarusi, G, Braslavsky, I, Lotti, M.
登録日2017-09-19
公開日2018-03-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.84 Å)
主引用文献Structure of a bacterial ice binding protein with two faces of interaction with ice.
FEBS J., 285, 2018

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